data_6I1I # _model_server_result.job_id YRG7o9D2nNmgyvBhCEj-Mg _model_server_result.datetime_utc '2024-11-01 20:30:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i1i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 6I1I # _exptl.entry_id 6I1I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 519.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Piperacillin (Open Form)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I1I _cell.length_a 99.714 _cell.length_b 147.672 _cell.length_c 43.254 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I1I _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H29 N5 O7 S' _chem_comp.formula_weight 519.571 _chem_comp.id JPP _chem_comp.mon_nstd_flag . _chem_comp.name 'Piperacillin (Open Form)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O03 C04 JPP doub 160 n n O01 C01 JPP doub 161 n n O02 C04 JPP sing 162 n n C04 C18 JPP sing 163 n n O04 C06 JPP doub 164 n n C01 C20 JPP sing 165 n n C18 N02 JPP sing 166 n n C18 C19 JPP sing 167 n n C07 C12 JPP doub 168 n y C07 C05 JPP sing 169 n y C12 C16 JPP sing 170 n y C09 C10 JPP sing 171 n n C09 N01 JPP sing 172 n n C03 C19 JPP sing 173 n n N02 C17 JPP sing 174 n n N03 C20 JPP sing 175 n n N03 C21 JPP sing 176 n n C06 N01 JPP sing 177 n n C06 N04 JPP sing 178 n n C10 N JPP sing 179 n n CA C05 JPP sing 180 n n CA C21 JPP sing 181 n n CA N04 JPP sing 182 n n C19 C02 JPP sing 183 n n C19 S JPP sing 184 n n C20 C17 JPP sing 185 n n C05 C08 JPP doub 186 n y N01 C11 JPP sing 187 n n C16 C13 JPP doub 188 n y C21 O06 JPP doub 189 n n C17 S JPP sing 190 n n C08 C13 JPP sing 191 n y N C15 JPP sing 192 n n N C14 JPP sing 193 n n C11 O05 JPP doub 194 n n C11 C14 JPP sing 195 n n C C15 JPP sing 196 n n C14 O JPP doub 197 n n O02 H1 JPP sing 198 n n N02 H2 JPP sing 199 n n N03 H4 JPP sing 200 n n N04 H5 JPP sing 201 n n C17 H6 JPP sing 202 n n C18 H7 JPP sing 203 n n C20 H8 JPP sing 204 n n C01 H9 JPP sing 205 n n C02 H10 JPP sing 206 n n C02 H11 JPP sing 207 n n C02 H12 JPP sing 208 n n C03 H13 JPP sing 209 n n C03 H14 JPP sing 210 n n C03 H15 JPP sing 211 n n CA H16 JPP sing 212 n n C07 H17 JPP sing 213 n n C08 H18 JPP sing 214 n n C09 H19 JPP sing 215 n n C09 H20 JPP sing 216 n n C10 H21 JPP sing 217 n n C10 H22 JPP sing 218 n n C12 H23 JPP sing 219 n n C13 H24 JPP sing 220 n n C15 H25 JPP sing 221 n n C15 H26 JPP sing 222 n n C16 H27 JPP sing 223 n n C H28 JPP sing 224 n n C H29 JPP sing 225 n n C H30 JPP sing 226 n n # _atom_sites.entry_id 6I1I _atom_sites.fract_transf_matrix[1][1] 0.010029 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006772 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JPP A 1 701 701 JPP EPP . C 3 HOH A 1 801 4 HOH HOH . C 3 HOH A 2 802 30 HOH HOH . C 3 HOH A 3 803 2 HOH HOH . C 3 HOH A 4 804 71 HOH HOH . C 3 HOH A 5 805 20 HOH HOH . C 3 HOH A 6 806 63 HOH HOH . C 3 HOH A 7 807 42 HOH HOH . C 3 HOH A 8 808 25 HOH HOH . C 3 HOH A 9 809 22 HOH HOH . C 3 HOH A 10 810 7 HOH HOH . C 3 HOH A 11 811 40 HOH HOH . C 3 HOH A 12 812 21 HOH HOH . C 3 HOH A 13 813 77 HOH HOH . C 3 HOH A 14 814 11 HOH HOH . C 3 HOH A 15 815 29 HOH HOH . C 3 HOH A 16 816 64 HOH HOH . C 3 HOH A 17 817 49 HOH HOH . C 3 HOH A 18 818 74 HOH HOH . C 3 HOH A 19 819 78 HOH HOH . C 3 HOH A 20 820 36 HOH HOH . C 3 HOH A 21 821 17 HOH HOH . C 3 HOH A 22 822 44 HOH HOH . C 3 HOH A 23 823 38 HOH HOH . C 3 HOH A 24 824 66 HOH HOH . C 3 HOH A 25 825 60 HOH HOH . C 3 HOH A 26 826 46 HOH HOH . C 3 HOH A 27 827 10 HOH HOH . C 3 HOH A 28 828 37 HOH HOH . C 3 HOH A 29 829 18 HOH HOH . C 3 HOH A 30 830 16 HOH HOH . C 3 HOH A 31 831 9 HOH HOH . C 3 HOH A 32 832 79 HOH HOH . C 3 HOH A 33 833 53 HOH HOH . C 3 HOH A 34 834 15 HOH HOH . C 3 HOH A 35 835 75 HOH HOH . C 3 HOH A 36 836 56 HOH HOH . C 3 HOH A 37 837 6 HOH HOH . C 3 HOH A 38 838 65 HOH HOH . C 3 HOH A 39 839 54 HOH HOH . C 3 HOH A 40 840 76 HOH HOH . C 3 HOH A 41 841 39 HOH HOH . C 3 HOH A 42 842 34 HOH HOH . C 3 HOH A 43 843 32 HOH HOH . C 3 HOH A 44 844 41 HOH HOH . C 3 HOH A 45 845 51 HOH HOH . C 3 HOH A 46 846 12 HOH HOH . C 3 HOH A 47 847 68 HOH HOH . C 3 HOH A 48 848 13 HOH HOH . C 3 HOH A 49 849 26 HOH HOH . C 3 HOH A 50 850 72 HOH HOH . C 3 HOH A 51 851 8 HOH HOH . C 3 HOH A 52 852 45 HOH HOH . C 3 HOH A 53 853 69 HOH HOH . C 3 HOH A 54 854 57 HOH HOH . C 3 HOH A 55 855 52 HOH HOH . C 3 HOH A 56 856 3 HOH HOH . C 3 HOH A 57 857 55 HOH HOH . C 3 HOH A 58 858 62 HOH HOH . C 3 HOH A 59 859 24 HOH HOH . C 3 HOH A 60 860 1 HOH HOH . C 3 HOH A 61 861 14 HOH HOH . C 3 HOH A 62 862 50 HOH HOH . C 3 HOH A 63 863 80 HOH HOH . C 3 HOH A 64 864 61 HOH HOH . C 3 HOH A 65 865 43 HOH HOH . C 3 HOH A 66 866 70 HOH HOH . C 3 HOH A 67 867 59 HOH HOH . C 3 HOH A 68 868 28 HOH HOH . C 3 HOH A 69 869 23 HOH HOH . C 3 HOH A 70 870 81 HOH HOH . C 3 HOH A 71 871 67 HOH HOH . C 3 HOH A 72 872 5 HOH HOH . C 3 HOH A 73 873 73 HOH HOH . C 3 HOH A 74 874 35 HOH HOH . C 3 HOH A 75 875 47 HOH HOH . C 3 HOH A 76 876 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S JPP . . . B 2 24.436 15.104 -15.852 1 24.89 ? S JPP 701 A 1 HETATM 2 O O01 JPP . . . B 2 24.295 14.976 -11.129 1 19.67 ? O01 JPP 701 A 1 HETATM 3 O O02 JPP . . . B 2 20.332 15.536 -13.573 1 23.91 ? O02 JPP 701 A 1 HETATM 4 O O03 JPP . . . B 2 21.298 17.532 -13.667 1 23.24 ? O03 JPP 701 A 1 HETATM 5 O O06 JPP . . . B 2 27.247 13.201 -14.746 1 22.11 ? O06 JPP 701 A 1 HETATM 6 O O04 JPP . . . B 2 26.455 8.949 -12.5 1 21.96 ? O04 JPP 701 A 1 HETATM 7 O O05 JPP . . . B 2 29.578 10.502 -14.322 1 24.49 ? O05 JPP 701 A 1 HETATM 8 O O JPP . . . B 2 31.933 9.746 -13.712 1 29.02 ? O JPP 701 A 1 HETATM 9 N N02 JPP . . . B 2 23.756 16.506 -13.877 1 24.33 ? N02 JPP 701 A 1 HETATM 10 N N03 JPP . . . B 2 25.531 13.373 -13.289 1 22.57 ? N03 JPP 701 A 1 HETATM 11 N N04 JPP . . . B 2 27.232 10.467 -13.961 1 22.46 ? N04 JPP 701 A 1 HETATM 12 N N01 JPP . . . B 2 28.608 8.896 -13.019 1 24.14 ? N01 JPP 701 A 1 HETATM 13 N N JPP . . . B 2 31.129 8.095 -12.4 1 25.39 ? N JPP 701 A 1 HETATM 14 C C17 JPP . . . B 2 24.949 15.76 -14.302 1 23.62 ? C17 JPP 701 A 1 HETATM 15 C C19 JPP . . . B 2 22.69 15.229 -15.663 1 24.45 ? C19 JPP 701 A 1 HETATM 16 C C18 JPP . . . B 2 22.593 15.633 -14.184 1 23.98 ? C18 JPP 701 A 1 HETATM 17 C C20 JPP . . . B 2 24.947 14.681 -13.226 1 23.47 ? C20 JPP 701 A 1 HETATM 18 C C01 JPP . . . B 2 25.247 15.176 -11.852 1 22.3 ? C01 JPP 701 A 1 HETATM 19 C C02 JPP . . . B 2 22.05 13.886 -15.962 1 25.95 ? C02 JPP 701 A 1 HETATM 20 C C03 JPP . . . B 2 22.124 16.306 -16.59 1 24.82 ? C03 JPP 701 A 1 HETATM 21 C C04 JPP . . . B 2 21.311 16.285 -13.78 1 24.03 ? C04 JPP 701 A 1 HETATM 22 C C21 JPP . . . B 2 26.338 12.726 -14.078 1 23.84 ? C21 JPP 701 A 1 HETATM 23 C CA JPP . . . B 2 26.016 11.253 -13.967 1 23.49 ? CA JPP 701 A 1 HETATM 24 C C05 JPP . . . B 2 25.05 10.814 -15 1 24.76 ? C05 JPP 701 A 1 HETATM 25 C C06 JPP . . . B 2 27.397 9.435 -13.128 1 23.58 ? C06 JPP 701 A 1 HETATM 26 C C07 JPP . . . B 2 25.141 11.264 -16.32 1 25 ? C07 JPP 701 A 1 HETATM 27 C C08 JPP . . . B 2 24.027 9.942 -14.635 1 25.19 ? C08 JPP 701 A 1 HETATM 28 C C09 JPP . . . B 2 28.741 7.591 -12.378 1 24.65 ? C09 JPP 701 A 1 HETATM 29 C C10 JPP . . . B 2 30.045 7.553 -11.594 1 25.65 ? C10 JPP 701 A 1 HETATM 30 C C11 JPP . . . B 2 29.652 9.561 -13.558 1 25.12 ? C11 JPP 701 A 1 HETATM 31 C C12 JPP . . . B 2 24.206 10.849 -17.267 1 26.2 ? C12 JPP 701 A 1 HETATM 32 C C13 JPP . . . B 2 23.105 9.516 -15.581 1 25.57 ? C13 JPP 701 A 1 HETATM 33 C C14 JPP . . . B 2 30.99 9.124 -13.232 1 26.07 ? C14 JPP 701 A 1 HETATM 34 C C15 JPP . . . B 2 32.425 7.46 -12.182 1 26.63 ? C15 JPP 701 A 1 HETATM 35 C C16 JPP . . . B 2 23.188 9.97 -16.899 1 25.75 ? C16 JPP 701 A 1 HETATM 36 C C JPP . . . B 2 33.129 8.194 -11.052 1 26.49 ? C JPP 701 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #