data_6I21
#
_model_server_result.job_id            83KLEg2oX2-kSqSY8paVkA 
_model_server_result.datetime_utc      '2024-11-08 01:06:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6i21 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":405}' 
#
_entry.id    6I21 
#
_exptl.entry_id    6I21 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6I21 
_cell.length_a            106.389 
_cell.length_b            106.389 
_cell.length_c            67.486 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6I21 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O SER 46 A SER 223 1_555 I MG MG . A MG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc2 A O SER 46 A SER 223 1_555 I MG MG . A MG 408 12_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc3 A O LEU 49 A LEU 226 1_555 I MG MG . A MG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc4 A O LEU 49 A LEU 226 1_555 I MG MG . A MG 408 12_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc5 I MG MG . A MG 408 1_555 P O HOH . A HOH 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? 
metalc ? metalc6 I MG MG . A MG 408 1_555 P O HOH . A HOH 533 12_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
metalc ? metalc7 J MG MG . A MG 409 1_555 P O HOH . A HOH 539 12_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6I21 
_atom_sites.fract_transf_matrix[1][1]    0.009399 
_atom_sites.fract_transf_matrix[1][2]    0.005427 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010854 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014818 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 401 1 EDO EDO . 
C 2 EDO A 1 402 2 EDO EDO . 
D 2 EDO A 1 403 3 EDO EDO . 
E 2 EDO A 1 404 4 EDO EDO . 
F 2 EDO A 1 405 5 EDO EDO . 
G 2 EDO A 1 406 6 EDO EDO . 
H 3 CL A 1 407 11 CL CL . 
I 4 MG A 1 408 21 MG MG . 
J 4 MG A 1 409 22 MG MG . 
K 5 PEG A 1 410 31 PEG PEG . 
L 5 PEG A 1 411 32 PEG PEG . 
M 5 PEG A 1 412 33 PEG PEG . 
N 6 FMN A 1 413 101 FMN FCY . 
O 6 FMN A 1 414 111 FMN FMN . 
P 7 HOH A 1 501 476 HOH HOH . 
P 7 HOH A 2 502 441 HOH HOH . 
P 7 HOH A 3 503 494 HOH HOH . 
P 7 HOH A 4 504 496 HOH HOH . 
P 7 HOH A 5 505 528 HOH HOH . 
P 7 HOH A 6 506 442 HOH HOH . 
P 7 HOH A 7 507 409 HOH HOH . 
P 7 HOH A 8 508 521 HOH HOH . 
P 7 HOH A 9 509 501 HOH HOH . 
P 7 HOH A 10 510 506 HOH HOH . 
P 7 HOH A 11 511 514 HOH HOH . 
P 7 HOH A 12 512 508 HOH HOH . 
P 7 HOH A 13 513 478 HOH HOH . 
P 7 HOH A 14 514 461 HOH HOH . 
P 7 HOH A 15 515 431 HOH HOH . 
P 7 HOH A 16 516 434 HOH HOH . 
P 7 HOH A 17 517 444 HOH HOH . 
P 7 HOH A 18 518 418 HOH HOH . 
P 7 HOH A 19 519 475 HOH HOH . 
P 7 HOH A 20 520 513 HOH HOH . 
P 7 HOH A 21 521 432 HOH HOH . 
P 7 HOH A 22 522 408 HOH HOH . 
P 7 HOH A 23 523 474 HOH HOH . 
P 7 HOH A 24 524 503 HOH HOH . 
P 7 HOH A 25 525 488 HOH HOH . 
P 7 HOH A 26 526 407 HOH HOH . 
P 7 HOH A 27 527 465 HOH HOH . 
P 7 HOH A 28 528 413 HOH HOH . 
P 7 HOH A 29 529 486 HOH HOH . 
P 7 HOH A 30 530 424 HOH HOH . 
P 7 HOH A 31 531 419 HOH HOH . 
P 7 HOH A 32 532 453 HOH HOH . 
P 7 HOH A 33 533 420 HOH HOH . 
P 7 HOH A 34 534 447 HOH HOH . 
P 7 HOH A 35 535 491 HOH HOH . 
P 7 HOH A 36 536 430 HOH HOH . 
P 7 HOH A 37 537 469 HOH HOH . 
P 7 HOH A 38 538 509 HOH HOH . 
P 7 HOH A 39 539 412 HOH HOH . 
P 7 HOH A 40 540 458 HOH HOH . 
P 7 HOH A 41 541 460 HOH HOH . 
P 7 HOH A 42 542 511 HOH HOH . 
P 7 HOH A 43 543 480 HOH HOH . 
P 7 HOH A 44 544 445 HOH HOH . 
P 7 HOH A 45 545 477 HOH HOH . 
P 7 HOH A 46 546 504 HOH HOH . 
P 7 HOH A 47 547 426 HOH HOH . 
P 7 HOH A 48 548 439 HOH HOH . 
P 7 HOH A 49 549 406 HOH HOH . 
P 7 HOH A 50 550 438 HOH HOH . 
P 7 HOH A 51 551 468 HOH HOH . 
P 7 HOH A 52 552 497 HOH HOH . 
P 7 HOH A 53 553 425 HOH HOH . 
P 7 HOH A 54 554 457 HOH HOH . 
P 7 HOH A 55 555 505 HOH HOH . 
P 7 HOH A 56 556 489 HOH HOH . 
P 7 HOH A 57 557 414 HOH HOH . 
P 7 HOH A 58 558 427 HOH HOH . 
P 7 HOH A 59 559 417 HOH HOH . 
P 7 HOH A 60 560 443 HOH HOH . 
P 7 HOH A 61 561 451 HOH HOH . 
P 7 HOH A 62 562 464 HOH HOH . 
P 7 HOH A 63 563 493 HOH HOH . 
P 7 HOH A 64 564 401 HOH HOH . 
P 7 HOH A 65 565 429 HOH HOH . 
P 7 HOH A 66 566 416 HOH HOH . 
P 7 HOH A 67 567 459 HOH HOH . 
P 7 HOH A 68 568 498 HOH HOH . 
P 7 HOH A 69 569 437 HOH HOH . 
P 7 HOH A 70 570 452 HOH HOH . 
P 7 HOH A 71 571 526 HOH HOH . 
P 7 HOH A 72 572 421 HOH HOH . 
P 7 HOH A 73 573 500 HOH HOH . 
P 7 HOH A 74 574 404 HOH HOH . 
P 7 HOH A 75 575 423 HOH HOH . 
P 7 HOH A 76 576 507 HOH HOH . 
P 7 HOH A 77 577 428 HOH HOH . 
P 7 HOH A 78 578 472 HOH HOH . 
P 7 HOH A 79 579 482 HOH HOH . 
P 7 HOH A 80 580 450 HOH HOH . 
P 7 HOH A 81 581 410 HOH HOH . 
P 7 HOH A 82 582 522 HOH HOH . 
P 7 HOH A 83 583 519 HOH HOH . 
P 7 HOH A 84 584 470 HOH HOH . 
P 7 HOH A 85 585 403 HOH HOH . 
P 7 HOH A 86 586 440 HOH HOH . 
P 7 HOH A 87 587 448 HOH HOH . 
P 7 HOH A 88 588 433 HOH HOH . 
P 7 HOH A 89 589 485 HOH HOH . 
P 7 HOH A 90 590 467 HOH HOH . 
P 7 HOH A 91 591 415 HOH HOH . 
P 7 HOH A 92 592 487 HOH HOH . 
P 7 HOH A 93 593 449 HOH HOH . 
P 7 HOH A 94 594 499 HOH HOH . 
P 7 HOH A 95 595 473 HOH HOH . 
P 7 HOH A 96 596 405 HOH HOH . 
P 7 HOH A 97 597 446 HOH HOH . 
P 7 HOH A 98 598 411 HOH HOH . 
P 7 HOH A 99 599 436 HOH HOH . 
P 7 HOH A 100 600 495 HOH HOH . 
P 7 HOH A 101 601 481 HOH HOH . 
P 7 HOH A 102 602 483 HOH HOH . 
P 7 HOH A 103 603 502 HOH HOH . 
P 7 HOH A 104 604 463 HOH HOH . 
P 7 HOH A 105 605 456 HOH HOH . 
P 7 HOH A 106 606 520 HOH HOH . 
P 7 HOH A 107 607 516 HOH HOH . 
P 7 HOH A 108 608 422 HOH HOH . 
P 7 HOH A 109 609 525 HOH HOH . 
P 7 HOH A 110 610 515 HOH HOH . 
P 7 HOH A 111 611 471 HOH HOH . 
P 7 HOH A 112 612 435 HOH HOH . 
P 7 HOH A 113 613 479 HOH HOH . 
P 7 HOH A 114 614 517 HOH HOH . 
P 7 HOH A 115 615 529 HOH HOH . 
P 7 HOH A 116 616 490 HOH HOH . 
P 7 HOH A 117 617 510 HOH HOH . 
P 7 HOH A 118 618 492 HOH HOH . 
P 7 HOH A 119 619 484 HOH HOH . 
P 7 HOH A 120 620 527 HOH HOH . 
P 7 HOH A 121 621 512 HOH HOH . 
P 7 HOH A 122 622 454 HOH HOH . 
P 7 HOH A 123 623 462 HOH HOH . 
P 7 HOH A 124 624 523 HOH HOH . 
P 7 HOH A 125 625 402 HOH HOH . 
P 7 HOH A 126 626 524 HOH HOH . 
P 7 HOH A 127 627 518 HOH HOH . 
P 7 HOH A 128 628 455 HOH HOH . 
P 7 HOH A 129 629 466 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 2 43.886 -43.08 9.188 1 34.46 ? C1 EDO 405 A 1 
HETATM 2 O O1 EDO . . . F 2 45.007 -42.885 10.073 1 39.77 ? O1 EDO 405 A 1 
HETATM 3 C C2 EDO . . . F 2 44.144 -42.144 8.056 1 37.23 ? C2 EDO 405 A 1 
HETATM 4 O O2 EDO . . . F 2 45.092 -42.797 7.2 1 52.51 ? O2 EDO 405 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#