data_6I2B # _model_server_result.job_id fn2Do_EG3PAckOvsjXA8ew _model_server_result.datetime_utc '2024-10-13 08:17:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i2b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6I2B # _exptl.entry_id 6I2B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 425.309 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[2-[(4-isoquinolin-5-ylsulfonyl-1,4-diazepan-1-yl)methyl]phenyl]boronic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I2B _cell.length_a 83.726 _cell.length_b 83.726 _cell.length_c 60.267 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I2B _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 12 A GLY 9 1_555 A N SEP 13 A SEP 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C SEP 13 A SEP 10 1_555 A N GLU 14 A GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C PHE 141 A PHE 138 1_555 A N SEP 142 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C SEP 142 A SEP 139 1_555 A N GLU 143 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C TRP 199 A TRP 196 1_555 A N TPO 200 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C TPO 200 A TPO 197 1_555 A N LEU 201 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C VAL 340 A VAL 337 1_555 A N SEP 341 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 A C SEP 341 A SEP 338 1_555 A N ILE 342 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 B OG1 THR 12 D THR 19 1_555 E C1 RIP . D RIP 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? # _chem_comp.formula 'C21 H24 B N3 O4 S' _chem_comp.formula_weight 425.309 _chem_comp.id 9LQ _chem_comp.mon_nstd_flag . _chem_comp.name '[2-[(4-isoquinolin-5-ylsulfonyl-1,4-diazepan-1-yl)methyl]phenyl]boronic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6I2B _atom_sites.fract_transf_matrix[1][1] 0.011944 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011944 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 9LQ A 1 401 1 9LQ BFS . D 3 9LQ A 1 402 2 9LQ BFS . E 4 RIP D 1 101 1 RIP RIB . F 5 HOH A 1 501 85 HOH HOH . F 5 HOH A 2 502 15 HOH HOH . F 5 HOH A 3 503 48 HOH HOH . F 5 HOH A 4 504 39 HOH HOH . F 5 HOH A 5 505 40 HOH HOH . F 5 HOH A 6 506 111 HOH HOH . F 5 HOH A 7 507 63 HOH HOH . F 5 HOH A 8 508 43 HOH HOH . F 5 HOH A 9 509 77 HOH HOH . F 5 HOH A 10 510 24 HOH HOH . F 5 HOH A 11 511 107 HOH HOH . F 5 HOH A 12 512 82 HOH HOH . F 5 HOH A 13 513 101 HOH HOH . F 5 HOH A 14 514 78 HOH HOH . F 5 HOH A 15 515 26 HOH HOH . F 5 HOH A 16 516 105 HOH HOH . F 5 HOH A 17 517 3 HOH HOH . F 5 HOH A 18 518 20 HOH HOH . F 5 HOH A 19 519 61 HOH HOH . F 5 HOH A 20 520 103 HOH HOH . F 5 HOH A 21 521 14 HOH HOH . F 5 HOH A 22 522 11 HOH HOH . F 5 HOH A 23 523 60 HOH HOH . F 5 HOH A 24 524 112 HOH HOH . F 5 HOH A 25 525 81 HOH HOH . F 5 HOH A 26 526 92 HOH HOH . F 5 HOH A 27 527 93 HOH HOH . F 5 HOH A 28 528 95 HOH HOH . F 5 HOH A 29 529 13 HOH HOH . F 5 HOH A 30 530 36 HOH HOH . F 5 HOH A 31 531 21 HOH HOH . F 5 HOH A 32 532 96 HOH HOH . F 5 HOH A 33 533 1 HOH HOH . F 5 HOH A 34 534 27 HOH HOH . F 5 HOH A 35 535 115 HOH HOH . F 5 HOH A 36 536 116 HOH HOH . F 5 HOH A 37 537 23 HOH HOH . F 5 HOH A 38 538 4 HOH HOH . F 5 HOH A 39 539 68 HOH HOH . F 5 HOH A 40 540 117 HOH HOH . F 5 HOH A 41 541 79 HOH HOH . F 5 HOH A 42 542 2 HOH HOH . F 5 HOH A 43 543 44 HOH HOH . F 5 HOH A 44 544 86 HOH HOH . F 5 HOH A 45 545 42 HOH HOH . F 5 HOH A 46 546 7 HOH HOH . F 5 HOH A 47 547 99 HOH HOH . F 5 HOH A 48 548 25 HOH HOH . F 5 HOH A 49 549 41 HOH HOH . F 5 HOH A 50 550 19 HOH HOH . F 5 HOH A 51 551 62 HOH HOH . F 5 HOH A 52 552 46 HOH HOH . F 5 HOH A 53 553 12 HOH HOH . F 5 HOH A 54 554 38 HOH HOH . F 5 HOH A 55 555 34 HOH HOH . F 5 HOH A 56 556 53 HOH HOH . F 5 HOH A 57 557 18 HOH HOH . F 5 HOH A 58 558 58 HOH HOH . F 5 HOH A 59 559 104 HOH HOH . F 5 HOH A 60 560 51 HOH HOH . F 5 HOH A 61 561 16 HOH HOH . F 5 HOH A 62 562 87 HOH HOH . F 5 HOH A 63 563 110 HOH HOH . F 5 HOH A 64 564 35 HOH HOH . F 5 HOH A 65 565 89 HOH HOH . F 5 HOH A 66 566 109 HOH HOH . F 5 HOH A 67 567 5 HOH HOH . F 5 HOH A 68 568 80 HOH HOH . F 5 HOH A 69 569 55 HOH HOH . F 5 HOH A 70 570 113 HOH HOH . F 5 HOH A 71 571 49 HOH HOH . F 5 HOH A 72 572 88 HOH HOH . F 5 HOH A 73 573 100 HOH HOH . F 5 HOH A 74 574 106 HOH HOH . F 5 HOH A 75 575 50 HOH HOH . F 5 HOH A 76 576 32 HOH HOH . F 5 HOH A 77 577 97 HOH HOH . F 5 HOH A 78 578 90 HOH HOH . F 5 HOH A 79 579 102 HOH HOH . F 5 HOH A 80 580 91 HOH HOH . F 5 HOH A 81 581 70 HOH HOH . F 5 HOH A 82 582 84 HOH HOH . F 5 HOH A 83 583 33 HOH HOH . F 5 HOH A 84 584 98 HOH HOH . F 5 HOH A 85 585 67 HOH HOH . F 5 HOH A 86 586 73 HOH HOH . F 5 HOH A 87 587 72 HOH HOH . G 5 HOH D 1 201 8 HOH HOH . G 5 HOH D 2 202 17 HOH HOH . G 5 HOH D 3 203 22 HOH HOH . G 5 HOH D 4 204 83 HOH HOH . G 5 HOH D 5 205 75 HOH HOH . G 5 HOH D 6 206 94 HOH HOH . G 5 HOH D 7 207 108 HOH HOH . G 5 HOH D 8 208 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 9LQ . . . C 3 20.02 -21.509 8.931 1 37.87 ? C1 9LQ 401 A 1 HETATM 2 C C2 9LQ . . . C 3 19.673 -22.793 9.32 1 37.87 ? C2 9LQ 401 A 1 HETATM 3 C C3 9LQ . . . C 3 20.615 -23.653 9.799 1 38.98 ? C3 9LQ 401 A 1 HETATM 4 C C4 9LQ . . . C 3 21.968 -23.253 9.915 1 36.55 ? C4 9LQ 401 A 1 HETATM 5 C C5 9LQ . . . C 3 22.34 -21.939 9.531 1 35.58 ? C5 9LQ 401 A 1 HETATM 6 C C6 9LQ . . . C 3 23.7 -21.574 9.668 1 37.22 ? C6 9LQ 401 A 1 HETATM 7 C C 9LQ . . . C 3 21.317 -21.082 9.024 1 35.86 ? C 9LQ 401 A 1 HETATM 8 N N 9LQ . . . C 3 24.261 -23.736 10.514 1 38.3 ? N 9LQ 401 A 1 HETATM 9 O O 9LQ . . . C 3 22.709 -19.685 7.396 1 30.77 ? O 9LQ 401 A 1 HETATM 10 O O2 9LQ . . . C 3 14.306 -15.739 8.259 1 31.69 ? O2 9LQ 401 A 1 HETATM 11 O O3 9LQ . . . C 3 22 -18.638 9.521 1 30.09 ? O3 9LQ 401 A 1 HETATM 12 S S 9LQ . . . C 3 21.713 -19.471 8.397 1 33.32 ? S 9LQ 401 A 1 HETATM 13 C C7 9LQ . . . C 3 24.586 -22.485 10.159 1 38.84 ? C7 9LQ 401 A 1 HETATM 14 C C8 9LQ . . . C 3 22.992 -24.099 10.392 1 37.53 ? C8 9LQ 401 A 1 HETATM 15 N N1 9LQ . . . C 3 20.397 -18.843 7.637 1 33.97 ? N1 9LQ 401 A 1 HETATM 16 C C20 9LQ . . . C 3 20.46 -18.082 6.369 1 36.86 ? C20 9LQ 401 A 1 HETATM 17 C C19 9LQ . . . C 3 19.488 -16.714 6.242 1 32.53 ? C19 9LQ 401 A 1 HETATM 18 N N2 9LQ . . . C 3 19.292 -15.866 7.431 1 34.25 ? N2 9LQ 401 A 1 HETATM 19 C C11 9LQ . . . C 3 19.747 -16.429 8.696 1 35.57 ? C11 9LQ 401 A 1 HETATM 20 C C10 9LQ . . . C 3 18.863 -17.584 9.071 1 38.77 ? C10 9LQ 401 A 1 HETATM 21 C C9 9LQ . . . C 3 19.021 -18.76 8.172 1 39.26 ? C9 9LQ 401 A 1 HETATM 22 C C12 9LQ . . . C 3 18.461 -14.651 7.37 1 37.23 ? C12 9LQ 401 A 1 HETATM 23 C C13 9LQ . . . C 3 17.782 -14.271 8.672 1 34.12 ? C13 9LQ 401 A 1 HETATM 24 C C18 9LQ . . . C 3 16.408 -14.486 8.891 1 34.43 ? C18 9LQ 401 A 1 HETATM 25 B B 9LQ . . . C 3 15.37 -15.009 7.818 1 36.34 ? B 9LQ 401 A 1 HETATM 26 O O1 9LQ . . . C 3 15.408 -14.646 6.503 1 34.24 ? O1 9LQ 401 A 1 HETATM 27 C C17 9LQ . . . C 3 15.888 -14.134 10.149 1 34.15 ? C17 9LQ 401 A 1 HETATM 28 C C16 9LQ . . . C 3 16.683 -13.57 11.13 1 32.49 ? C16 9LQ 401 A 1 HETATM 29 C C15 9LQ . . . C 3 18.012 -13.344 10.89 1 32.83 ? C15 9LQ 401 A 1 HETATM 30 C C14 9LQ . . . C 3 18.561 -13.684 9.668 1 32.45 ? C14 9LQ 401 A 1 HETATM 31 H H 9LQ . . . C 3 19.221 -20.872 8.556 1 45.44 ? H 9LQ 401 A 1 HETATM 32 H H1 9LQ . . . C 3 18.635 -23.114 9.241 1 45.44 ? H1 9LQ 401 A 1 HETATM 33 H H2 9LQ . . . C 3 20.344 -24.663 10.1 1 46.78 ? H2 9LQ 401 A 1 HETATM 34 H H3 9LQ . . . C 3 24.02 -20.574 9.381 1 44.67 ? H3 9LQ 401 A 1 HETATM 35 H H19 9LQ . . . C 3 13.789 -15.964 7.441 1 38.03 ? H19 9LQ 401 A 1 HETATM 36 H H4 9LQ . . . C 3 25.637 -22.233 10.292 1 46.6 ? H4 9LQ 401 A 1 HETATM 37 H H5 9LQ . . . C 3 22.759 -25.12 10.688 1 45.04 ? H5 9LQ 401 A 1 HETATM 38 H H22 9LQ . . . C 3 21.502 -17.811 6.209 1 44.23 ? H22 9LQ 401 A 1 HETATM 39 H H23 9LQ . . . C 3 20.158 -18.771 5.581 1 44.23 ? H23 9LQ 401 A 1 HETATM 40 H H20 9LQ . . . C 3 18.512 -17.045 5.891 1 39.03 ? H20 9LQ 401 A 1 HETATM 41 H H21 9LQ . . . C 3 19.909 -16.063 5.478 1 39.03 ? H21 9LQ 401 A 1 HETATM 42 H H11 9LQ . . . C 3 20.775 -16.77 8.584 1 42.68 ? H11 9LQ 401 A 1 HETATM 43 H H10 9LQ . . . C 3 19.694 -15.648 9.452 1 42.68 ? H10 9LQ 401 A 1 HETATM 44 H H8 9LQ . . . C 3 17.825 -17.263 8.995 1 46.53 ? H8 9LQ 401 A 1 HETATM 45 H H9 9LQ . . . C 3 19.036 -17.881 10.104 1 46.53 ? H9 9LQ 401 A 1 HETATM 46 H H7 9LQ . . . C 3 18.334 -18.672 7.331 1 47.11 ? H7 9LQ 401 A 1 HETATM 47 H H6 9LQ . . . C 3 18.805 -19.677 8.718 1 47.11 ? H6 9LQ 401 A 1 HETATM 48 H H13 9LQ . . . C 3 19.053 -13.802 7.031 1 44.67 ? H13 9LQ 401 A 1 HETATM 49 H H12 9LQ . . . C 3 17.66 -14.812 6.651 1 44.67 ? H12 9LQ 401 A 1 HETATM 50 H H18 9LQ . . . C 3 16.186 -14.032 6.432 1 41.09 ? H18 9LQ 401 A 1 HETATM 51 H H17 9LQ . . . C 3 14.833 -14.309 10.357 1 40.98 ? H17 9LQ 401 A 1 HETATM 52 H H16 9LQ . . . C 3 16.246 -13.308 12.092 1 38.99 ? H16 9LQ 401 A 1 HETATM 53 H H15 9LQ . . . C 3 18.639 -12.896 11.66 1 39.4 ? H15 9LQ 401 A 1 HETATM 54 H H14 9LQ . . . C 3 19.617 -13.489 9.487 1 38.94 ? H14 9LQ 401 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 54 #