data_6I2Y # _model_server_result.job_id eSWjl2jURuyjGBdS-58xlA _model_server_result.datetime_utc '2024-11-25 00:28:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2000}' # _entry.id 6I2Y # _exptl.entry_id 6I2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 632.654 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-(3-fluoro-4-{[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinolin-4-yl]oxy}phenyl)-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I2Y _cell.length_a 50.93 _cell.length_b 95.33 _cell.length_c 132.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 191 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 206 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 191 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 206 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.033 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C34 H34 F2 N4 O6' _chem_comp.formula_weight 632.654 _chem_comp.id 88Z _chem_comp.mon_nstd_flag . _chem_comp.name "N-(3-fluoro-4-{[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinolin-4-yl]oxy}phenyl)-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 88Z doub 1 n y C1 C6 88Z sing 2 n y C1 O11 88Z sing 3 n n C3 C2 88Z sing 4 n y O13 C2 88Z sing 5 n n C3 C4 88Z doub 6 n y C3 H3 88Z sing 7 n n N7 C4 88Z sing 8 n y C4 C5 88Z sing 9 n y C5 C10 88Z sing 10 n y C5 C6 88Z doub 11 n y C6 H6 88Z sing 12 n n C8 N7 88Z doub 13 n y C8 C9 88Z sing 14 n y C8 H8 88Z sing 15 n n C9 C10 88Z doub 16 n y C9 H9 88Z sing 17 n n C10 O14 88Z sing 18 n n O11 C12 88Z sing 19 n n C12 H12 88Z sing 20 n n C12 H12A 88Z sing 21 n n C12 H12B 88Z sing 22 n n O13 C23 88Z sing 23 n n C15 O14 88Z sing 24 n n C16 C15 88Z doub 25 n y C15 C20 88Z sing 26 n y C17 C16 88Z sing 27 n y C16 H16 88Z sing 28 n n C17 C18 88Z doub 29 n y C17 H17 88Z sing 30 n n N22 C18 88Z sing 31 n n C18 C19 88Z sing 32 n y C19 C20 88Z doub 33 n y C19 H19 88Z sing 34 n n C20 F21 88Z sing 35 n n N22 C32 88Z sing 36 n n N22 HN22 88Z sing 37 n n C23 C24 88Z sing 38 n n C23 H23 88Z sing 39 n n C23 H23A 88Z sing 40 n n C25 C24 88Z sing 41 n n C24 H24 88Z sing 42 n n C24 H24A 88Z sing 43 n n N26 C25 88Z sing 44 n n C25 H25 88Z sing 45 n n C25 H25A 88Z sing 46 n n C27 N26 88Z sing 47 n n N26 C31 88Z sing 48 n n C28 C27 88Z sing 49 n n C27 H27 88Z sing 50 n n C27 H27A 88Z sing 51 n n C28 O29 88Z sing 52 n n C28 H28 88Z sing 53 n n C28 H28A 88Z sing 54 n n O29 C30 88Z sing 55 n n C30 C31 88Z sing 56 n n C30 H30 88Z sing 57 n n C30 H30A 88Z sing 58 n n C31 H31 88Z sing 59 n n C31 H31A 88Z sing 60 n n C33 C32 88Z sing 61 n n C32 O36 88Z doub 62 n n C34 C33 88Z sing 63 n n C33 C45 88Z sing 64 n n C33 C46 88Z sing 65 n n N35 C34 88Z sing 66 n n O37 C34 88Z doub 67 n n C38 N35 88Z sing 68 n n N35 HN35 88Z sing 69 n n C43 C38 88Z doub 70 n y C39 C38 88Z sing 71 n y C40 C39 88Z doub 72 n y C39 H39 88Z sing 73 n n C41 C40 88Z sing 74 n y C40 H40 88Z sing 75 n n F44 C41 88Z sing 76 n n C41 C42 88Z doub 77 n y C42 C43 88Z sing 78 n y C42 H42 88Z sing 79 n n C43 H43 88Z sing 80 n n C45 C46 88Z sing 81 n n C45 H45 88Z sing 82 n n C45 H45A 88Z sing 83 n n C46 H46 88Z sing 84 n n C46 H46A 88Z sing 85 n n # _atom_sites.entry_id 6I2Y _atom_sites.fract_transf_matrix[1][1] 0.019635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01049 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 88Z A 1 2000 2000 88Z 88Z . D 2 88Z B 1 2000 2000 88Z 88Z . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 88Z . . . C 2 22.743 -8.66 -2.664 1 67.9 ? C1 88Z 2000 A 1 HETATM 2 C C2 88Z . . . C 2 22.968 -8.722 -4.061 1 73.19 ? C2 88Z 2000 A 1 HETATM 3 C C3 88Z . . . C 2 21.985 -9.178 -4.885 1 68.98 ? C3 88Z 2000 A 1 HETATM 4 C C4 88Z . . . C 2 20.73 -9.564 -4.379 1 65.21 ? C4 88Z 2000 A 1 HETATM 5 C C5 88Z . . . C 2 20.509 -9.5 -2.98 1 65.13 ? C5 88Z 2000 A 1 HETATM 6 C C6 88Z . . . C 2 21.545 -9.038 -2.141 1 64.54 ? C6 88Z 2000 A 1 HETATM 7 N N7 88Z . . . C 2 19.732 -9.854 -5.268 1 63.73 ? N7 88Z 2000 A 1 HETATM 8 C C8 88Z . . . C 2 18.516 -10.038 -4.784 1 64.34 ? C8 88Z 2000 A 1 HETATM 9 C C9 88Z . . . C 2 18.173 -9.953 -3.445 1 63.15 ? C9 88Z 2000 A 1 HETATM 10 C C10 88Z . . . C 2 19.167 -9.677 -2.545 1 69.12 ? C10 88Z 2000 A 1 HETATM 11 O O11 88Z . . . C 2 23.808 -8.212 -1.933 1 65.93 ? O11 88Z 2000 A 1 HETATM 12 C C12 88Z . . . C 2 23.656 -8.154 -0.518 1 60.83 ? C12 88Z 2000 A 1 HETATM 13 O O13 88Z . . . C 2 24.196 -8.274 -4.453 1 83.73 ? O13 88Z 2000 A 1 HETATM 14 O O14 88Z . . . C 2 18.929 -9.539 -1.175 1 72 ? O14 88Z 2000 A 1 HETATM 15 C C15 88Z . . . C 2 17.629 -9.637 -0.692 1 72.95 ? C15 88Z 2000 A 1 HETATM 16 C C16 88Z . . . C 2 16.764 -8.566 -0.845 1 74.58 ? C16 88Z 2000 A 1 HETATM 17 C C17 88Z . . . C 2 15.485 -8.63 -0.331 1 68.39 ? C17 88Z 2000 A 1 HETATM 18 C C18 88Z . . . C 2 15.053 -9.763 0.342 1 67.5 ? C18 88Z 2000 A 1 HETATM 19 C C19 88Z . . . C 2 15.92 -10.839 0.507 1 60.68 ? C19 88Z 2000 A 1 HETATM 20 C C20 88Z . . . C 2 17.183 -10.758 -0.023 1 69.1 ? C20 88Z 2000 A 1 HETATM 21 F F21 88Z . . . C 2 18.016 -11.818 0.083 1 77.94 ? F21 88Z 2000 A 1 HETATM 22 N N22 88Z . . . C 2 13.704 -9.73 0.772 1 70.61 ? N22 88Z 2000 A 1 HETATM 23 C C23 88Z . . . C 2 24.496 -8.3 -5.856 1 84.06 ? C23 88Z 2000 A 1 HETATM 24 C C24 88Z . . . C 2 25.739 -7.48 -6.092 1 81.02 ? C24 88Z 2000 A 1 HETATM 25 C C25 88Z . . . C 2 26.955 -8.033 -5.368 1 89.15 ? C25 88Z 2000 A 1 HETATM 26 N N26 88Z . . . C 2 28.204 -7.327 -5.683 1 96.15 ? N26 88Z 2000 A 1 HETATM 27 C C27 88Z . . . C 2 28.365 -6.132 -4.85 1 98.38 ? C27 88Z 2000 A 1 HETATM 28 C C28 88Z . . . C 2 29.653 -5.431 -5.197 1 96.06 ? C28 88Z 2000 A 1 HETATM 29 O O29 88Z . . . C 2 30.778 -6.285 -5.025 1 93.35 ? O29 88Z 2000 A 1 HETATM 30 C C30 88Z . . . C 2 30.632 -7.45 -5.829 1 93.41 ? C30 88Z 2000 A 1 HETATM 31 C C31 88Z . . . C 2 29.368 -8.198 -5.496 1 96.45 ? C31 88Z 2000 A 1 HETATM 32 C C32 88Z . . . C 2 12.961 -10.667 1.401 1 71.61 ? C32 88Z 2000 A 1 HETATM 33 C C33 88Z . . . C 2 11.521 -10.241 1.574 1 65.86 ? C33 88Z 2000 A 1 HETATM 34 C C34 88Z . . . C 2 11.145 -8.961 0.872 1 64.48 ? C34 88Z 2000 A 1 HETATM 35 N N35 88Z . . . C 2 9.821 -8.69 0.797 1 59.31 ? N35 88Z 2000 A 1 HETATM 36 O O36 88Z . . . C 2 13.368 -11.752 1.792 1 79.85 ? O36 88Z 2000 A 1 HETATM 37 O O37 88Z . . . C 2 12.025 -8.239 0.425 1 60.83 ? O37 88Z 2000 A 1 HETATM 38 C C38 88Z . . . C 2 9.206 -7.516 0.294 1 64.56 ? C38 88Z 2000 A 1 HETATM 39 C C39 88Z . . . C 2 9.775 -6.788 -0.744 1 68.91 ? C39 88Z 2000 A 1 HETATM 40 C C40 88Z . . . C 2 9.185 -5.618 -1.183 1 72.91 ? C40 88Z 2000 A 1 HETATM 41 C C41 88Z . . . C 2 8.032 -5.205 -0.577 1 75.43 ? C41 88Z 2000 A 1 HETATM 42 C C42 88Z . . . C 2 7.433 -5.9 0.437 1 64.38 ? C42 88Z 2000 A 1 HETATM 43 C C43 88Z . . . C 2 8.028 -7.068 0.874 1 62.79 ? C43 88Z 2000 A 1 HETATM 44 F F44 88Z . . . C 2 7.462 -4.042 -0.992 1 87.13 ? F44 88Z 2000 A 1 HETATM 45 C C45 88Z . . . C 2 10.884 -10.429 2.952 1 57.32 ? C45 88Z 2000 A 1 HETATM 46 C C46 88Z . . . C 2 10.46 -11.311 1.841 1 58.56 ? C46 88Z 2000 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 46 #