data_6I30 # _model_server_result.job_id 9fYyoAmSzHiWSBFHe1c5zQ _model_server_result.datetime_utc '2024-11-14 07:33:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i30 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":600}' # _entry.id 6I30 # _exptl.entry_id 6I30 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 317.145 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I30 _cell.length_a 45.04 _cell.length_b 75.34 _cell.length_c 100.62 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I30 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 61 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 90 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id B02 _struct_conn.ptnr2_label_comp_id C6S _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id C6S _struct_conn.ptnr2_auth_seq_id 600 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.344 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H20 B N O5' _chem_comp.formula_weight 317.145 _chem_comp.id C6S _chem_comp.mon_nstd_flag . _chem_comp.name '(3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 B02 C6S sing 70 n n B02 O03 C6S sing 71 n n B02 C07 C6S sing 72 n n O03 C04 C6S sing 73 n n C04 C05 C6S sing 74 n y C04 C20 C6S doub 75 n y C05 C06 C6S sing 76 n n C05 C17 C6S doub 77 n y C06 C07 C6S sing 78 n n C07 N08 C6S sing 79 n n N08 C09 C6S sing 80 n n C09 O10 C6S doub 81 n n C09 C11 C6S sing 82 n n C11 C12 C6S sing 83 n n C11 C16 C6S sing 84 n n C12 C13 C6S sing 85 n n C13 C14 C6S sing 86 n n C14 C15 C6S sing 87 n n C15 C16 C6S sing 88 n n C17 C18 C6S sing 89 n y C18 C19 C6S doub 90 n y C19 C20 C6S sing 91 n y C20 C21 C6S sing 92 n n C21 O22 C6S doub 93 n n C21 O23 C6S sing 94 n n O01 H01 C6S sing 95 n n C07 H07 C6S sing 96 n n C06 H061 C6S sing 97 n n C06 H062 C6S sing 98 n n C17 H17 C6S sing 99 n n N08 H08 C6S sing 100 n n C11 H11 C6S sing 101 n n C12 H121 C6S sing 102 n n C12 H122 C6S sing 103 n n C16 H161 C6S sing 104 n n C16 H162 C6S sing 105 n n C13 H131 C6S sing 106 n n C13 H132 C6S sing 107 n n C14 H141 C6S sing 108 n n C14 H142 C6S sing 109 n n C15 H151 C6S sing 110 n n C15 H152 C6S sing 111 n n C18 H18 C6S sing 112 n n C19 H19 C6S sing 113 n n O23 H23 C6S sing 114 n n # _atom_sites.entry_id 6I30 _atom_sites.fract_transf_matrix[1][1] 0.022202 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013273 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C6S A 1 600 600 C6S C6S . C 3 HOH A 1 701 423 HOH HOH . C 3 HOH A 2 702 473 HOH HOH . C 3 HOH A 3 703 401 HOH HOH . C 3 HOH A 4 704 400 HOH HOH . C 3 HOH A 5 705 389 HOH HOH . C 3 HOH A 6 706 398 HOH HOH . C 3 HOH A 7 707 395 HOH HOH . C 3 HOH A 8 708 394 HOH HOH . C 3 HOH A 9 709 393 HOH HOH . C 3 HOH A 10 710 402 HOH HOH . C 3 HOH A 11 711 414 HOH HOH . C 3 HOH A 12 712 412 HOH HOH . C 3 HOH A 13 713 422 HOH HOH . C 3 HOH A 14 714 450 HOH HOH . C 3 HOH A 15 715 407 HOH HOH . C 3 HOH A 16 716 464 HOH HOH . C 3 HOH A 17 717 444 HOH HOH . C 3 HOH A 18 718 411 HOH HOH . C 3 HOH A 19 719 470 HOH HOH . C 3 HOH A 20 720 391 HOH HOH . C 3 HOH A 21 721 408 HOH HOH . C 3 HOH A 22 722 410 HOH HOH . C 3 HOH A 23 723 399 HOH HOH . C 3 HOH A 24 724 397 HOH HOH . C 3 HOH A 25 725 524 HOH HOH . C 3 HOH A 26 726 465 HOH HOH . C 3 HOH A 27 727 396 HOH HOH . C 3 HOH A 28 728 528 HOH HOH . C 3 HOH A 29 729 441 HOH HOH . C 3 HOH A 30 730 390 HOH HOH . C 3 HOH A 31 731 392 HOH HOH . C 3 HOH A 32 732 429 HOH HOH . C 3 HOH A 33 733 416 HOH HOH . C 3 HOH A 34 734 430 HOH HOH . C 3 HOH A 35 735 433 HOH HOH . C 3 HOH A 36 736 481 HOH HOH . C 3 HOH A 37 737 413 HOH HOH . C 3 HOH A 38 738 517 HOH HOH . C 3 HOH A 39 739 424 HOH HOH . C 3 HOH A 40 740 425 HOH HOH . C 3 HOH A 41 741 404 HOH HOH . C 3 HOH A 42 742 437 HOH HOH . C 3 HOH A 43 743 436 HOH HOH . C 3 HOH A 44 744 487 HOH HOH . C 3 HOH A 45 745 461 HOH HOH . C 3 HOH A 46 746 515 HOH HOH . C 3 HOH A 47 747 503 HOH HOH . C 3 HOH A 48 748 489 HOH HOH . C 3 HOH A 49 749 496 HOH HOH . C 3 HOH A 50 750 484 HOH HOH . C 3 HOH A 51 751 406 HOH HOH . C 3 HOH A 52 752 449 HOH HOH . C 3 HOH A 53 753 460 HOH HOH . C 3 HOH A 54 754 455 HOH HOH . C 3 HOH A 55 755 434 HOH HOH . C 3 HOH A 56 756 506 HOH HOH . C 3 HOH A 57 757 428 HOH HOH . C 3 HOH A 58 758 501 HOH HOH . C 3 HOH A 59 759 490 HOH HOH . C 3 HOH A 60 760 440 HOH HOH . C 3 HOH A 61 761 488 HOH HOH . C 3 HOH A 62 762 418 HOH HOH . C 3 HOH A 63 763 454 HOH HOH . C 3 HOH A 64 764 472 HOH HOH . C 3 HOH A 65 765 471 HOH HOH . C 3 HOH A 66 766 494 HOH HOH . C 3 HOH A 67 767 533 HOH HOH . C 3 HOH A 68 768 445 HOH HOH . C 3 HOH A 69 769 485 HOH HOH . C 3 HOH A 70 770 409 HOH HOH . C 3 HOH A 71 771 516 HOH HOH . C 3 HOH A 72 772 431 HOH HOH . C 3 HOH A 73 773 510 HOH HOH . C 3 HOH A 74 774 531 HOH HOH . C 3 HOH A 75 775 504 HOH HOH . C 3 HOH A 76 776 505 HOH HOH . C 3 HOH A 77 777 495 HOH HOH . C 3 HOH A 78 778 493 HOH HOH . C 3 HOH A 79 779 498 HOH HOH . C 3 HOH A 80 780 514 HOH HOH . C 3 HOH A 81 781 453 HOH HOH . C 3 HOH A 82 782 492 HOH HOH . C 3 HOH A 83 783 415 HOH HOH . C 3 HOH A 84 784 525 HOH HOH . C 3 HOH A 85 785 476 HOH HOH . C 3 HOH A 86 786 502 HOH HOH . C 3 HOH A 87 787 497 HOH HOH . C 3 HOH A 88 788 426 HOH HOH . C 3 HOH A 89 789 452 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 C6S . . . B 2 -4.549 11.13 -16.941 1 20.9 ? O01 C6S 600 A 1 HETATM 2 B B02 C6S . . . B 2 -4.287 11.003 -18.281 1 21.4 ? B02 C6S 600 A 1 HETATM 3 O O03 C6S . . . B 2 -2.951 10.792 -18.471 1 23.25 ? O03 C6S 600 A 1 HETATM 4 C C04 C6S . . . B 2 -2.13 11.992 -18.304 1 27.43 ? C04 C6S 600 A 1 HETATM 5 C C05 C6S . . . B 2 -2.548 13.162 -18.946 1 25.51 ? C05 C6S 600 A 1 HETATM 6 C C06 C6S . . . B 2 -3.844 13.072 -19.78 1 23.03 ? C06 C6S 600 A 1 HETATM 7 C C07 C6S . . . B 2 -4.876 12.242 -19.057 1 20.86 ? C07 C6S 600 A 1 HETATM 8 N N08 C6S . . . B 2 -5.558 13.152 -18.086 1 21.44 ? N08 C6S 600 A 1 HETATM 9 C C09 C6S . . . B 2 -6.55 14.131 -18.514 1 21.5 ? C09 C6S 600 A 1 HETATM 10 O O10 C6S . . . B 2 -6.846 14.216 -19.655 1 21.04 ? O10 C6S 600 A 1 HETATM 11 C C11 C6S . . . B 2 -7.203 15.04 -17.469 1 24.15 ? C11 C6S 600 A 1 HETATM 12 C C12 C6S . . . B 2 -6.925 16.497 -17.823 1 26.55 ? C12 C6S 600 A 1 HETATM 13 C C13 C6S . . . B 2 -7.584 17.449 -16.824 1 28.71 ? C13 C6S 600 A 1 HETATM 14 C C14 C6S . . . B 2 -9.086 17.193 -16.694 1 28.61 ? C14 C6S 600 A 1 HETATM 15 C C15 C6S . . . B 2 -9.402 15.726 -16.413 1 27.34 ? C15 C6S 600 A 1 HETATM 16 C C16 C6S . . . B 2 -8.701 14.767 -17.381 1 25.36 ? C16 C6S 600 A 1 HETATM 17 C C17 C6S . . . B 2 -1.823 14.344 -18.814 1 27.82 ? C17 C6S 600 A 1 HETATM 18 C C18 C6S . . . B 2 -0.66 14.355 -18.036 1 24.38 ? C18 C6S 600 A 1 HETATM 19 C C19 C6S . . . B 2 -0.239 13.179 -17.386 1 24.49 ? C19 C6S 600 A 1 HETATM 20 C C20 C6S . . . B 2 -0.975 11.999 -17.522 1 26.59 ? C20 C6S 600 A 1 HETATM 21 C C21 C6S . . . B 2 -0.511 10.721 -16.825 1 28.22 ? C21 C6S 600 A 1 HETATM 22 O O22 C6S . . . B 2 -0.364 9.654 -17.481 1 27.05 ? O22 C6S 600 A 1 HETATM 23 O O23 C6S . . . B 2 -0.266 10.729 -15.594 1 30.66 ? O23 C6S 600 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #