data_6I3U # _model_server_result.job_id cFIe9IW8UQ9bBXqy8CS5OQ _model_server_result.datetime_utc '2024-10-19 11:30:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i3u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 6I3U # _exptl.entry_id 6I3U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 520.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-morpholin-4-yl-6-[7-[(2~{R})-1-morpholin-4-ylpropan-2-yl]oxy-9~{H}-thioxanthen-4-yl]pyran-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I3U _cell.length_a 84.17 _cell.length_b 167.17 _cell.length_c 61.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I3U _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H32 N2 O5 S' _chem_comp.formula_weight 520.64 _chem_comp.id H2E _chem_comp.mon_nstd_flag . _chem_comp.name 2-morpholin-4-yl-6-[7-[(2~{R})-1-morpholin-4-ylpropan-2-yl]oxy-9~{H}-thioxanthen-4-yl]pyran-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C18 H2E doub 129 n y C19 C20 H2E sing 130 n y C18 C17 H2E sing 131 n y O2 C13 H2E sing 132 n n O2 C14 H2E sing 133 n n C13 C12 H2E sing 134 n n C20 C1 H2E doub 135 n y C17 C21 H2E sing 136 n n C17 C2 H2E doub 137 n y C22 C21 H2E doub 138 n n C22 C23 H2E sing 139 n n O5 C23 H2E doub 140 n n C21 O3 H2E sing 141 n n C23 C24 H2E sing 142 n n C12 N1 H2E sing 143 n n C14 C15 H2E sing 144 n n O3 C25 H2E sing 145 n n C24 C25 H2E doub 146 n n C1 C2 H2E sing 147 n y C1 C5 H2E sing 148 n n C25 N2 H2E sing 149 n n C2 S1 H2E sing 150 n n C29 N2 H2E sing 151 n n C29 C28 H2E sing 152 n n N2 C26 H2E sing 153 n n C26 C27 H2E sing 154 n n C15 N1 H2E sing 155 n n N1 C11 H2E sing 156 n n C5 C4 H2E sing 157 n n O4 C28 H2E sing 158 n n O4 C27 H2E sing 159 n n C4 C6 H2E doub 160 n y C4 C3 H2E sing 161 n y C6 C7 H2E sing 162 n y S1 C3 H2E sing 163 n n C11 C10 H2E sing 164 n n C3 C9 H2E doub 165 n y C10 O1 H2E sing 166 n n C10 C16 H2E sing 167 n n C7 O1 H2E sing 168 n n C7 C8 H2E doub 169 n y C9 C8 H2E sing 170 n y C5 H1 H2E sing 171 n n C5 H2 H2E sing 172 n n C10 H3 H2E sing 173 n n C11 H4 H2E sing 174 n n C11 H5 H2E sing 175 n n C12 H6 H2E sing 176 n n C12 H7 H2E sing 177 n n C13 H8 H2E sing 178 n n C13 H9 H2E sing 179 n n C14 H10 H2E sing 180 n n C14 H11 H2E sing 181 n n C24 H12 H2E sing 182 n n C6 H13 H2E sing 183 n n C16 H14 H2E sing 184 n n C16 H15 H2E sing 185 n n C16 H16 H2E sing 186 n n C15 H17 H2E sing 187 n n C15 H18 H2E sing 188 n n C8 H19 H2E sing 189 n n C9 H20 H2E sing 190 n n C18 H22 H2E sing 191 n n C19 H23 H2E sing 192 n n C20 H24 H2E sing 193 n n C22 H25 H2E sing 194 n n C26 H26 H2E sing 195 n n C26 H27 H2E sing 196 n n C27 H28 H2E sing 197 n n C27 H29 H2E sing 198 n n C28 H30 H2E sing 199 n n C28 H31 H2E sing 200 n n C29 H32 H2E sing 201 n n C29 H33 H2E sing 202 n n # _atom_sites.entry_id 6I3U _atom_sites.fract_transf_matrix[1][1] 0.011881 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005982 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01626 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H2E A 1 901 1 H2E 167 . C 3 HOH A 1 1001 56 HOH HOH . C 3 HOH A 2 1002 161 HOH HOH . C 3 HOH A 3 1003 53 HOH HOH . C 3 HOH A 4 1004 113 HOH HOH . C 3 HOH A 5 1005 144 HOH HOH . C 3 HOH A 6 1006 154 HOH HOH . C 3 HOH A 7 1007 147 HOH HOH . C 3 HOH A 8 1008 64 HOH HOH . C 3 HOH A 9 1009 80 HOH HOH . C 3 HOH A 10 1010 26 HOH HOH . C 3 HOH A 11 1011 11 HOH HOH . C 3 HOH A 12 1012 118 HOH HOH . C 3 HOH A 13 1013 138 HOH HOH . C 3 HOH A 14 1014 97 HOH HOH . C 3 HOH A 15 1015 83 HOH HOH . C 3 HOH A 16 1016 92 HOH HOH . C 3 HOH A 17 1017 31 HOH HOH . C 3 HOH A 18 1018 69 HOH HOH . C 3 HOH A 19 1019 107 HOH HOH . C 3 HOH A 20 1020 122 HOH HOH . C 3 HOH A 21 1021 179 HOH HOH . C 3 HOH A 22 1022 67 HOH HOH . C 3 HOH A 23 1023 127 HOH HOH . C 3 HOH A 24 1024 182 HOH HOH . C 3 HOH A 25 1025 34 HOH HOH . C 3 HOH A 26 1026 131 HOH HOH . C 3 HOH A 27 1027 10 HOH HOH . C 3 HOH A 28 1028 45 HOH HOH . C 3 HOH A 29 1029 50 HOH HOH . C 3 HOH A 30 1030 21 HOH HOH . C 3 HOH A 31 1031 61 HOH HOH . C 3 HOH A 32 1032 137 HOH HOH . C 3 HOH A 33 1033 59 HOH HOH . C 3 HOH A 34 1034 108 HOH HOH . C 3 HOH A 35 1035 36 HOH HOH . C 3 HOH A 36 1036 66 HOH HOH . C 3 HOH A 37 1037 42 HOH HOH . C 3 HOH A 38 1038 75 HOH HOH . C 3 HOH A 39 1039 171 HOH HOH . C 3 HOH A 40 1040 58 HOH HOH . C 3 HOH A 41 1041 68 HOH HOH . C 3 HOH A 42 1042 166 HOH HOH . C 3 HOH A 43 1043 55 HOH HOH . C 3 HOH A 44 1044 29 HOH HOH . C 3 HOH A 45 1045 33 HOH HOH . C 3 HOH A 46 1046 49 HOH HOH . C 3 HOH A 47 1047 20 HOH HOH . C 3 HOH A 48 1048 12 HOH HOH . C 3 HOH A 49 1049 106 HOH HOH . C 3 HOH A 50 1050 78 HOH HOH . C 3 HOH A 51 1051 159 HOH HOH . C 3 HOH A 52 1052 90 HOH HOH . C 3 HOH A 53 1053 73 HOH HOH . C 3 HOH A 54 1054 87 HOH HOH . C 3 HOH A 55 1055 71 HOH HOH . C 3 HOH A 56 1056 48 HOH HOH . C 3 HOH A 57 1057 81 HOH HOH . C 3 HOH A 58 1058 72 HOH HOH . C 3 HOH A 59 1059 52 HOH HOH . C 3 HOH A 60 1060 174 HOH HOH . C 3 HOH A 61 1061 100 HOH HOH . C 3 HOH A 62 1062 165 HOH HOH . C 3 HOH A 63 1063 39 HOH HOH . C 3 HOH A 64 1064 70 HOH HOH . C 3 HOH A 65 1065 133 HOH HOH . C 3 HOH A 66 1066 17 HOH HOH . C 3 HOH A 67 1067 149 HOH HOH . C 3 HOH A 68 1068 86 HOH HOH . C 3 HOH A 69 1069 109 HOH HOH . C 3 HOH A 70 1070 30 HOH HOH . C 3 HOH A 71 1071 164 HOH HOH . C 3 HOH A 72 1072 22 HOH HOH . C 3 HOH A 73 1073 47 HOH HOH . C 3 HOH A 74 1074 7 HOH HOH . C 3 HOH A 75 1075 43 HOH HOH . C 3 HOH A 76 1076 152 HOH HOH . C 3 HOH A 77 1077 162 HOH HOH . C 3 HOH A 78 1078 116 HOH HOH . C 3 HOH A 79 1079 8 HOH HOH . C 3 HOH A 80 1080 99 HOH HOH . C 3 HOH A 81 1081 110 HOH HOH . C 3 HOH A 82 1082 23 HOH HOH . C 3 HOH A 83 1083 77 HOH HOH . C 3 HOH A 84 1084 176 HOH HOH . C 3 HOH A 85 1085 125 HOH HOH . C 3 HOH A 86 1086 128 HOH HOH . C 3 HOH A 87 1087 51 HOH HOH . C 3 HOH A 88 1088 134 HOH HOH . C 3 HOH A 89 1089 18 HOH HOH . C 3 HOH A 90 1090 28 HOH HOH . C 3 HOH A 91 1091 38 HOH HOH . C 3 HOH A 92 1092 79 HOH HOH . C 3 HOH A 93 1093 105 HOH HOH . C 3 HOH A 94 1094 91 HOH HOH . C 3 HOH A 95 1095 44 HOH HOH . C 3 HOH A 96 1096 19 HOH HOH . C 3 HOH A 97 1097 135 HOH HOH . C 3 HOH A 98 1098 98 HOH HOH . C 3 HOH A 99 1099 15 HOH HOH . C 3 HOH A 100 1100 32 HOH HOH . C 3 HOH A 101 1101 9 HOH HOH . C 3 HOH A 102 1102 160 HOH HOH . C 3 HOH A 103 1103 1 HOH HOH . C 3 HOH A 104 1104 60 HOH HOH . C 3 HOH A 105 1105 63 HOH HOH . C 3 HOH A 106 1106 115 HOH HOH . C 3 HOH A 107 1107 3 HOH HOH . C 3 HOH A 108 1108 104 HOH HOH . C 3 HOH A 109 1109 74 HOH HOH . C 3 HOH A 110 1110 132 HOH HOH . C 3 HOH A 111 1111 35 HOH HOH . C 3 HOH A 112 1112 88 HOH HOH . C 3 HOH A 113 1113 89 HOH HOH . C 3 HOH A 114 1114 25 HOH HOH . C 3 HOH A 115 1115 117 HOH HOH . C 3 HOH A 116 1116 168 HOH HOH . C 3 HOH A 117 1117 136 HOH HOH . C 3 HOH A 118 1118 37 HOH HOH . C 3 HOH A 119 1119 180 HOH HOH . C 3 HOH A 120 1120 172 HOH HOH . C 3 HOH A 121 1121 41 HOH HOH . C 3 HOH A 122 1122 13 HOH HOH . C 3 HOH A 123 1123 103 HOH HOH . C 3 HOH A 124 1124 27 HOH HOH . C 3 HOH A 125 1125 155 HOH HOH . C 3 HOH A 126 1126 111 HOH HOH . C 3 HOH A 127 1127 5 HOH HOH . C 3 HOH A 128 1128 24 HOH HOH . C 3 HOH A 129 1129 145 HOH HOH . C 3 HOH A 130 1130 84 HOH HOH . C 3 HOH A 131 1131 114 HOH HOH . C 3 HOH A 132 1132 16 HOH HOH . C 3 HOH A 133 1133 14 HOH HOH . C 3 HOH A 134 1134 6 HOH HOH . C 3 HOH A 135 1135 158 HOH HOH . C 3 HOH A 136 1136 40 HOH HOH . C 3 HOH A 137 1137 156 HOH HOH . C 3 HOH A 138 1138 178 HOH HOH . C 3 HOH A 139 1139 169 HOH HOH . C 3 HOH A 140 1140 46 HOH HOH . C 3 HOH A 141 1141 62 HOH HOH . C 3 HOH A 142 1142 94 HOH HOH . C 3 HOH A 143 1143 57 HOH HOH . C 3 HOH A 144 1144 4 HOH HOH . C 3 HOH A 145 1145 167 HOH HOH . C 3 HOH A 146 1146 101 HOH HOH . C 3 HOH A 147 1147 163 HOH HOH . C 3 HOH A 148 1148 157 HOH HOH . C 3 HOH A 149 1149 54 HOH HOH . C 3 HOH A 150 1150 142 HOH HOH . C 3 HOH A 151 1151 112 HOH HOH . C 3 HOH A 152 1152 175 HOH HOH . C 3 HOH A 153 1153 76 HOH HOH . C 3 HOH A 154 1154 151 HOH HOH . C 3 HOH A 155 1155 96 HOH HOH . C 3 HOH A 156 1156 146 HOH HOH . C 3 HOH A 157 1157 129 HOH HOH . C 3 HOH A 158 1158 126 HOH HOH . C 3 HOH A 159 1159 150 HOH HOH . C 3 HOH A 160 1160 173 HOH HOH . C 3 HOH A 161 1161 148 HOH HOH . C 3 HOH A 162 1162 170 HOH HOH . C 3 HOH A 163 1163 85 HOH HOH . C 3 HOH A 164 1164 102 HOH HOH . C 3 HOH A 165 1165 124 HOH HOH . C 3 HOH A 166 1166 123 HOH HOH . C 3 HOH A 167 1167 65 HOH HOH . C 3 HOH A 168 1168 121 HOH HOH . C 3 HOH A 169 1169 130 HOH HOH . C 3 HOH A 170 1170 119 HOH HOH . C 3 HOH A 171 1171 95 HOH HOH . C 3 HOH A 172 1172 153 HOH HOH . C 3 HOH A 173 1173 139 HOH HOH . C 3 HOH A 174 1174 177 HOH HOH . C 3 HOH A 175 1175 141 HOH HOH . C 3 HOH A 176 1176 120 HOH HOH . C 3 HOH A 177 1177 143 HOH HOH . C 3 HOH A 178 1178 82 HOH HOH . C 3 HOH A 179 1179 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 H2E . . . B 2 17.019 11.567 77.324 1 38.23 ? C1 H2E 901 A 1 HETATM 2 C C2 H2E . . . B 2 18.341 11.949 77.587 1 40.86 ? C2 H2E 901 A 1 HETATM 3 C C3 H2E . . . B 2 18.32 9.774 79.299 1 38.75 ? C3 H2E 901 A 1 HETATM 4 C C4 H2E . . . B 2 17.002 9.569 78.892 1 40.39 ? C4 H2E 901 A 1 HETATM 5 C C5 H2E . . . B 2 16.237 10.706 78.279 1 37.68 ? C5 H2E 901 A 1 HETATM 6 C C10 H2E . . . B 2 15.296 5.737 79.463 1 53.34 ? C10 H2E 901 A 1 HETATM 7 C C11 H2E . . . B 2 15.189 4.231 79.259 1 53.71 ? C11 H2E 901 A 1 HETATM 8 C C12 H2E . . . B 2 16.039 4.413 76.986 1 52.73 ? C12 H2E 901 A 1 HETATM 9 C C13 H2E . . . B 2 17.019 3.832 76.003 1 55.09 ? C13 H2E 901 A 1 HETATM 10 C C14 H2E . . . B 2 16.93 1.76 77.057 1 58.98 ? C14 H2E 901 A 1 HETATM 11 C C24 H2E . . . B 2 23.153 13.504 77.303 1 34.52 ? C24 H2E 901 A 1 HETATM 12 C C25 H2E . . . B 2 22.542 12.274 77.498 1 35.23 ? C25 H2E 901 A 1 HETATM 13 C C6 H2E . . . B 2 16.412 8.32 79.08 1 37.78 ? C6 H2E 901 A 1 HETATM 14 C C16 H2E . . . B 2 14.325 6.279 80.521 1 52.31 ? C16 H2E 901 A 1 HETATM 15 C C15 H2E . . . B 2 15.943 2.283 78.067 1 57.9 ? C15 H2E 901 A 1 HETATM 16 S S1 H2E . . . B 2 19.099 11.328 79.06 1 42.79 ? S1 H2E 901 A 1 HETATM 17 C C7 H2E . . . B 2 17.158 7.285 79.64 1 40.71 ? C7 H2E 901 A 1 HETATM 18 C C8 H2E . . . B 2 18.481 7.499 80.038 1 40.23 ? C8 H2E 901 A 1 HETATM 19 C C9 H2E . . . B 2 19.048 8.736 79.871 1 38.96 ? C9 H2E 901 A 1 HETATM 20 O O1 H2E . . . B 2 16.67 6.026 79.859 1 49.48 ? O1 H2E 901 A 1 HETATM 21 N N1 H2E . . . B 2 16.148 3.722 78.281 1 57.71 ? N1 H2E 901 A 1 HETATM 22 O O2 H2E . . . B 2 16.813 2.438 75.813 1 55.3 ? O2 H2E 901 A 1 HETATM 23 C C17 H2E . . . B 2 19.02 12.817 76.705 1 39.2 ? C17 H2E 901 A 1 HETATM 24 C C18 H2E . . . B 2 18.382 13.226 75.542 1 40.56 ? C18 H2E 901 A 1 HETATM 25 C C19 H2E . . . B 2 17.075 12.848 75.286 1 39.17 ? C19 H2E 901 A 1 HETATM 26 C C20 H2E . . . B 2 16.397 12.04 76.171 1 39.14 ? C20 H2E 901 A 1 HETATM 27 C C21 H2E . . . B 2 20.451 13.183 76.902 1 41.12 ? C21 H2E 901 A 1 HETATM 28 C C22 H2E . . . B 2 21.026 14.431 76.717 1 35.56 ? C22 H2E 901 A 1 HETATM 29 C C23 H2E . . . B 2 22.385 14.622 76.932 1 41.04 ? C23 H2E 901 A 1 HETATM 30 O O3 H2E . . . B 2 21.227 12.11 77.235 1 39.16 ? O3 H2E 901 A 1 HETATM 31 N N2 H2E . . . B 2 23.248 11.138 77.782 1 35.43 ? N2 H2E 901 A 1 HETATM 32 C C26 H2E . . . B 2 24.714 11.112 77.873 1 36.94 ? C26 H2E 901 A 1 HETATM 33 C C27 H2E . . . B 2 25.162 10.042 78.846 1 37.3 ? C27 H2E 901 A 1 HETATM 34 O O4 H2E . . . B 2 24.594 8.775 78.536 1 38.12 ? O4 H2E 901 A 1 HETATM 35 C C28 H2E . . . B 2 23.189 8.852 78.637 1 35.67 ? C28 H2E 901 A 1 HETATM 36 C C29 H2E . . . B 2 22.616 9.818 77.635 1 34.97 ? C29 H2E 901 A 1 HETATM 37 O O5 H2E . . . B 2 22.91 15.753 76.811 1 41.13 ? O5 H2E 901 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 37 #