data_6I4V # _model_server_result.job_id NjQiZyWcFOq41f1_N9rlLA _model_server_result.datetime_utc '2024-10-11 01:29:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i4v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6I4V # _exptl.entry_id 6I4V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 75.067 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.95 _cell.angle_gamma 90 _cell.entry_id 6I4V _cell.length_a 114.46 _cell.length_b 38.95 _cell.length_c 89.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I4V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # _chem_comp.formula 'C2 H5 N O2' _chem_comp.formula_weight 75.067 _chem_comp.id GLY _chem_comp.mon_nstd_flag y _chem_comp.name GLYCINE _chem_comp.type 'peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLY sing 120 n n N H GLY sing 121 n n N H2 GLY sing 122 n n CA C GLY sing 123 n n CA HA2 GLY sing 124 n n CA HA3 GLY sing 125 n n C O GLY doub 126 n n C OXT GLY sing 127 n n OXT HXT GLY sing 128 n n # _atom_sites.entry_id 6I4V _atom_sites.fract_transf_matrix[1][1] 0.008737 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00217 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLY A 1 401 1 GLY GLY . C 3 H3B A 1 402 1 H3B D3S . D 2 GLY A 1 403 2 GLY GLY . E 4 HOH A 1 501 48 HOH HOH . E 4 HOH A 2 502 99 HOH HOH . E 4 HOH A 3 503 107 HOH HOH . E 4 HOH A 4 504 121 HOH HOH . E 4 HOH A 5 505 34 HOH HOH . E 4 HOH A 6 506 170 HOH HOH . E 4 HOH A 7 507 211 HOH HOH . E 4 HOH A 8 508 168 HOH HOH . E 4 HOH A 9 509 28 HOH HOH . E 4 HOH A 10 510 66 HOH HOH . E 4 HOH A 11 511 3 HOH HOH . E 4 HOH A 12 512 33 HOH HOH . E 4 HOH A 13 513 100 HOH HOH . E 4 HOH A 14 514 188 HOH HOH . E 4 HOH A 15 515 124 HOH HOH . E 4 HOH A 16 516 97 HOH HOH . E 4 HOH A 17 517 13 HOH HOH . E 4 HOH A 18 518 131 HOH HOH . E 4 HOH A 19 519 118 HOH HOH . E 4 HOH A 20 520 204 HOH HOH . E 4 HOH A 21 521 133 HOH HOH . E 4 HOH A 22 522 70 HOH HOH . E 4 HOH A 23 523 67 HOH HOH . E 4 HOH A 24 524 64 HOH HOH . E 4 HOH A 25 525 122 HOH HOH . E 4 HOH A 26 526 149 HOH HOH . E 4 HOH A 27 527 114 HOH HOH . E 4 HOH A 28 528 60 HOH HOH . E 4 HOH A 29 529 190 HOH HOH . E 4 HOH A 30 530 25 HOH HOH . E 4 HOH A 31 531 101 HOH HOH . E 4 HOH A 32 532 72 HOH HOH . E 4 HOH A 33 533 175 HOH HOH . E 4 HOH A 34 534 9 HOH HOH . E 4 HOH A 35 535 126 HOH HOH . E 4 HOH A 36 536 102 HOH HOH . E 4 HOH A 37 537 42 HOH HOH . E 4 HOH A 38 538 119 HOH HOH . E 4 HOH A 39 539 76 HOH HOH . E 4 HOH A 40 540 199 HOH HOH . E 4 HOH A 41 541 47 HOH HOH . E 4 HOH A 42 542 6 HOH HOH . E 4 HOH A 43 543 117 HOH HOH . E 4 HOH A 44 544 17 HOH HOH . E 4 HOH A 45 545 41 HOH HOH . E 4 HOH A 46 546 49 HOH HOH . E 4 HOH A 47 547 127 HOH HOH . E 4 HOH A 48 548 23 HOH HOH . E 4 HOH A 49 549 146 HOH HOH . E 4 HOH A 50 550 16 HOH HOH . E 4 HOH A 51 551 65 HOH HOH . E 4 HOH A 52 552 78 HOH HOH . E 4 HOH A 53 553 75 HOH HOH . E 4 HOH A 54 554 135 HOH HOH . E 4 HOH A 55 555 43 HOH HOH . E 4 HOH A 56 556 40 HOH HOH . E 4 HOH A 57 557 27 HOH HOH . E 4 HOH A 58 558 108 HOH HOH . E 4 HOH A 59 559 11 HOH HOH . E 4 HOH A 60 560 89 HOH HOH . E 4 HOH A 61 561 123 HOH HOH . E 4 HOH A 62 562 36 HOH HOH . E 4 HOH A 63 563 31 HOH HOH . E 4 HOH A 64 564 140 HOH HOH . E 4 HOH A 65 565 12 HOH HOH . E 4 HOH A 66 566 154 HOH HOH . E 4 HOH A 67 567 196 HOH HOH . E 4 HOH A 68 568 18 HOH HOH . E 4 HOH A 69 569 32 HOH HOH . E 4 HOH A 70 570 15 HOH HOH . E 4 HOH A 71 571 19 HOH HOH . E 4 HOH A 72 572 30 HOH HOH . E 4 HOH A 73 573 55 HOH HOH . E 4 HOH A 74 574 50 HOH HOH . E 4 HOH A 75 575 96 HOH HOH . E 4 HOH A 76 576 214 HOH HOH . E 4 HOH A 77 577 37 HOH HOH . E 4 HOH A 78 578 176 HOH HOH . E 4 HOH A 79 579 81 HOH HOH . E 4 HOH A 80 580 160 HOH HOH . E 4 HOH A 81 581 2 HOH HOH . E 4 HOH A 82 582 77 HOH HOH . E 4 HOH A 83 583 105 HOH HOH . E 4 HOH A 84 584 52 HOH HOH . E 4 HOH A 85 585 209 HOH HOH . E 4 HOH A 86 586 73 HOH HOH . E 4 HOH A 87 587 109 HOH HOH . E 4 HOH A 88 588 1 HOH HOH . E 4 HOH A 89 589 39 HOH HOH . E 4 HOH A 90 590 136 HOH HOH . E 4 HOH A 91 591 46 HOH HOH . E 4 HOH A 92 592 179 HOH HOH . E 4 HOH A 93 593 8 HOH HOH . E 4 HOH A 94 594 203 HOH HOH . E 4 HOH A 95 595 54 HOH HOH . E 4 HOH A 96 596 35 HOH HOH . E 4 HOH A 97 597 93 HOH HOH . E 4 HOH A 98 598 111 HOH HOH . E 4 HOH A 99 599 141 HOH HOH . E 4 HOH A 100 600 172 HOH HOH . E 4 HOH A 101 601 158 HOH HOH . E 4 HOH A 102 602 98 HOH HOH . E 4 HOH A 103 603 62 HOH HOH . E 4 HOH A 104 604 110 HOH HOH . E 4 HOH A 105 605 138 HOH HOH . E 4 HOH A 106 606 80 HOH HOH . E 4 HOH A 107 607 202 HOH HOH . E 4 HOH A 108 608 7 HOH HOH . E 4 HOH A 109 609 116 HOH HOH . E 4 HOH A 110 610 150 HOH HOH . E 4 HOH A 111 611 68 HOH HOH . E 4 HOH A 112 612 167 HOH HOH . E 4 HOH A 113 613 151 HOH HOH . E 4 HOH A 114 614 134 HOH HOH . E 4 HOH A 115 615 180 HOH HOH . E 4 HOH A 116 616 86 HOH HOH . E 4 HOH A 117 617 58 HOH HOH . E 4 HOH A 118 618 104 HOH HOH . E 4 HOH A 119 619 88 HOH HOH . E 4 HOH A 120 620 24 HOH HOH . E 4 HOH A 121 621 45 HOH HOH . E 4 HOH A 122 622 53 HOH HOH . E 4 HOH A 123 623 164 HOH HOH . E 4 HOH A 124 624 29 HOH HOH . E 4 HOH A 125 625 112 HOH HOH . E 4 HOH A 126 626 106 HOH HOH . E 4 HOH A 127 627 22 HOH HOH . E 4 HOH A 128 628 4 HOH HOH . E 4 HOH A 129 629 206 HOH HOH . E 4 HOH A 130 630 147 HOH HOH . E 4 HOH A 131 631 14 HOH HOH . E 4 HOH A 132 632 201 HOH HOH . E 4 HOH A 133 633 103 HOH HOH . E 4 HOH A 134 634 10 HOH HOH . E 4 HOH A 135 635 184 HOH HOH . E 4 HOH A 136 636 57 HOH HOH . E 4 HOH A 137 637 5 HOH HOH . E 4 HOH A 138 638 38 HOH HOH . E 4 HOH A 139 639 165 HOH HOH . E 4 HOH A 140 640 156 HOH HOH . E 4 HOH A 141 641 137 HOH HOH . E 4 HOH A 142 642 183 HOH HOH . E 4 HOH A 143 643 56 HOH HOH . E 4 HOH A 144 644 182 HOH HOH . E 4 HOH A 145 645 83 HOH HOH . E 4 HOH A 146 646 69 HOH HOH . E 4 HOH A 147 647 120 HOH HOH . E 4 HOH A 148 648 152 HOH HOH . E 4 HOH A 149 649 153 HOH HOH . E 4 HOH A 150 650 21 HOH HOH . E 4 HOH A 151 651 185 HOH HOH . E 4 HOH A 152 652 171 HOH HOH . E 4 HOH A 153 653 84 HOH HOH . E 4 HOH A 154 654 130 HOH HOH . E 4 HOH A 155 655 59 HOH HOH . E 4 HOH A 156 656 20 HOH HOH . E 4 HOH A 157 657 61 HOH HOH . E 4 HOH A 158 658 212 HOH HOH . E 4 HOH A 159 659 94 HOH HOH . E 4 HOH A 160 660 26 HOH HOH . E 4 HOH A 161 661 113 HOH HOH . E 4 HOH A 162 662 197 HOH HOH . E 4 HOH A 163 663 74 HOH HOH . E 4 HOH A 164 664 144 HOH HOH . E 4 HOH A 165 665 129 HOH HOH . E 4 HOH A 166 666 85 HOH HOH . E 4 HOH A 167 667 192 HOH HOH . E 4 HOH A 168 668 207 HOH HOH . E 4 HOH A 169 669 95 HOH HOH . E 4 HOH A 170 670 92 HOH HOH . E 4 HOH A 171 671 169 HOH HOH . E 4 HOH A 172 672 115 HOH HOH . E 4 HOH A 173 673 166 HOH HOH . E 4 HOH A 174 674 90 HOH HOH . E 4 HOH A 175 675 208 HOH HOH . E 4 HOH A 176 676 178 HOH HOH . E 4 HOH A 177 677 128 HOH HOH . E 4 HOH A 178 678 187 HOH HOH . E 4 HOH A 179 679 210 HOH HOH . E 4 HOH A 180 680 143 HOH HOH . E 4 HOH A 181 681 162 HOH HOH . E 4 HOH A 182 682 145 HOH HOH . E 4 HOH A 183 683 189 HOH HOH . E 4 HOH A 184 684 186 HOH HOH . E 4 HOH A 185 685 139 HOH HOH . E 4 HOH A 186 686 205 HOH HOH . E 4 HOH A 187 687 163 HOH HOH . E 4 HOH A 188 688 79 HOH HOH . E 4 HOH A 189 689 87 HOH HOH . E 4 HOH A 190 690 194 HOH HOH . E 4 HOH A 191 691 159 HOH HOH . E 4 HOH A 192 692 44 HOH HOH . E 4 HOH A 193 693 91 HOH HOH . E 4 HOH A 194 694 161 HOH HOH . E 4 HOH A 195 695 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLY . . . B 2 -10.337 3.24 18.296 1 56.32 ? N GLY 401 A 1 HETATM 2 C CA GLY . . . B 2 -9.493 4.391 17.867 1 64.86 ? CA GLY 401 A 1 HETATM 3 C C GLY . . . B 2 -8.271 4.572 18.741 1 74.92 ? C GLY 401 A 1 HETATM 4 O O GLY . . . B 2 -7.136 4.574 18.255 1 73.5 ? O GLY 401 A 1 HETATM 5 O OXT GLY . . . B 2 -8.383 4.719 19.954 1 70.91 ? OXT GLY 401 A 1 HETATM 6 H H1 GLY . . . B 2 -10.552 2.749 17.586 1 67.6 ? H1 GLY 401 A 1 HETATM 7 H H2 GLY . . . B 2 -9.884 2.74 18.877 1 67.6 ? H2 GLY 401 A 1 HETATM 8 H H3 GLY . . . B 2 -11.079 3.544 18.682 1 67.6 ? H3 GLY 401 A 1 HETATM 9 H HA2 GLY . . . B 2 -9.197 4.248 16.954 1 77.86 ? HA2 GLY 401 A 1 HETATM 10 H HA3 GLY . . . B 2 -10.019 5.205 17.905 1 77.86 ? HA3 GLY 401 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #