data_6I5G # _model_server_result.job_id 8GTkdpFnq40pkNR8gqyDtg _model_server_result.datetime_utc '2024-11-02 05:27:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i5g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":603}' # _entry.id 6I5G # _exptl.entry_id 6I5G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.78 _cell.angle_gamma 90 _cell.entry_id 6I5G _cell.length_a 89.49 _cell.length_b 79.992 _cell.length_c 104.544 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I5G _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6I5G _atom_sites.fract_transf_matrix[1][1] 0.011174 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001328 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 601 2 EDO EDO . D 2 EDO A 1 602 4 EDO EDO . E 2 EDO A 1 603 5 EDO EDO . F 2 EDO A 1 604 6 EDO EDO . G 2 EDO A 1 605 9 EDO EDO . H 2 EDO A 1 606 11 EDO EDO . I 3 PTG A 1 607 1 PTG 15d . J 2 EDO B 1 601 1 EDO EDO . K 2 EDO B 1 602 3 EDO EDO . L 2 EDO B 1 603 7 EDO EDO . M 2 EDO B 1 604 8 EDO EDO . N 2 EDO B 1 605 10 EDO EDO . O 2 EDO B 1 606 12 EDO EDO . P 3 PTG B 1 607 2 PTG 15d . Q 4 HOH A 1 701 25 HOH HOH . Q 4 HOH A 2 702 208 HOH HOH . Q 4 HOH A 3 703 126 HOH HOH . Q 4 HOH A 4 704 204 HOH HOH . Q 4 HOH A 5 705 76 HOH HOH . Q 4 HOH A 6 706 26 HOH HOH . Q 4 HOH A 7 707 141 HOH HOH . Q 4 HOH A 8 708 224 HOH HOH . Q 4 HOH A 9 709 116 HOH HOH . Q 4 HOH A 10 710 222 HOH HOH . Q 4 HOH A 11 711 5 HOH HOH . Q 4 HOH A 12 712 142 HOH HOH . Q 4 HOH A 13 713 195 HOH HOH . Q 4 HOH A 14 714 46 HOH HOH . Q 4 HOH A 15 715 4 HOH HOH . Q 4 HOH A 16 716 118 HOH HOH . Q 4 HOH A 17 717 40 HOH HOH . Q 4 HOH A 18 718 220 HOH HOH . Q 4 HOH A 19 719 168 HOH HOH . Q 4 HOH A 20 720 136 HOH HOH . Q 4 HOH A 21 721 11 HOH HOH . Q 4 HOH A 22 722 221 HOH HOH . Q 4 HOH A 23 723 35 HOH HOH . Q 4 HOH A 24 724 148 HOH HOH . Q 4 HOH A 25 725 218 HOH HOH . Q 4 HOH A 26 726 72 HOH HOH . Q 4 HOH A 27 727 16 HOH HOH . Q 4 HOH A 28 728 10 HOH HOH . Q 4 HOH A 29 729 61 HOH HOH . Q 4 HOH A 30 730 90 HOH HOH . Q 4 HOH A 31 731 128 HOH HOH . Q 4 HOH A 32 732 156 HOH HOH . Q 4 HOH A 33 733 188 HOH HOH . Q 4 HOH A 34 734 152 HOH HOH . Q 4 HOH A 35 735 73 HOH HOH . Q 4 HOH A 36 736 184 HOH HOH . Q 4 HOH A 37 737 28 HOH HOH . Q 4 HOH A 38 738 111 HOH HOH . Q 4 HOH A 39 739 151 HOH HOH . Q 4 HOH A 40 740 178 HOH HOH . Q 4 HOH A 41 741 13 HOH HOH . Q 4 HOH A 42 742 12 HOH HOH . Q 4 HOH A 43 743 24 HOH HOH . Q 4 HOH A 44 744 54 HOH HOH . Q 4 HOH A 45 745 138 HOH HOH . Q 4 HOH A 46 746 100 HOH HOH . Q 4 HOH A 47 747 89 HOH HOH . Q 4 HOH A 48 748 6 HOH HOH . Q 4 HOH A 49 749 29 HOH HOH . Q 4 HOH A 50 750 115 HOH HOH . Q 4 HOH A 51 751 78 HOH HOH . Q 4 HOH A 52 752 94 HOH HOH . Q 4 HOH A 53 753 143 HOH HOH . Q 4 HOH A 54 754 123 HOH HOH . Q 4 HOH A 55 755 18 HOH HOH . Q 4 HOH A 56 756 102 HOH HOH . Q 4 HOH A 57 757 37 HOH HOH . Q 4 HOH A 58 758 199 HOH HOH . Q 4 HOH A 59 759 140 HOH HOH . Q 4 HOH A 60 760 68 HOH HOH . Q 4 HOH A 61 761 193 HOH HOH . Q 4 HOH A 62 762 164 HOH HOH . Q 4 HOH A 63 763 59 HOH HOH . Q 4 HOH A 64 764 194 HOH HOH . Q 4 HOH A 65 765 109 HOH HOH . Q 4 HOH A 66 766 200 HOH HOH . Q 4 HOH A 67 767 51 HOH HOH . Q 4 HOH A 68 768 58 HOH HOH . Q 4 HOH A 69 769 33 HOH HOH . Q 4 HOH A 70 770 207 HOH HOH . Q 4 HOH A 71 771 210 HOH HOH . Q 4 HOH A 72 772 170 HOH HOH . Q 4 HOH A 73 773 77 HOH HOH . Q 4 HOH A 74 774 52 HOH HOH . Q 4 HOH A 75 775 74 HOH HOH . Q 4 HOH A 76 776 172 HOH HOH . Q 4 HOH A 77 777 157 HOH HOH . Q 4 HOH A 78 778 124 HOH HOH . Q 4 HOH A 79 779 62 HOH HOH . Q 4 HOH A 80 780 174 HOH HOH . Q 4 HOH A 81 781 165 HOH HOH . Q 4 HOH A 82 782 9 HOH HOH . Q 4 HOH A 83 783 98 HOH HOH . Q 4 HOH A 84 784 163 HOH HOH . Q 4 HOH A 85 785 176 HOH HOH . Q 4 HOH A 86 786 92 HOH HOH . Q 4 HOH A 87 787 192 HOH HOH . Q 4 HOH A 88 788 66 HOH HOH . Q 4 HOH A 89 789 81 HOH HOH . Q 4 HOH A 90 790 206 HOH HOH . Q 4 HOH A 91 791 166 HOH HOH . Q 4 HOH A 92 792 180 HOH HOH . Q 4 HOH A 93 793 216 HOH HOH . Q 4 HOH A 94 794 55 HOH HOH . Q 4 HOH A 95 795 214 HOH HOH . Q 4 HOH A 96 796 201 HOH HOH . Q 4 HOH A 97 797 205 HOH HOH . Q 4 HOH A 98 798 169 HOH HOH . Q 4 HOH A 99 799 120 HOH HOH . Q 4 HOH A 100 800 179 HOH HOH . Q 4 HOH A 101 801 217 HOH HOH . Q 4 HOH A 102 802 177 HOH HOH . Q 4 HOH A 103 803 137 HOH HOH . Q 4 HOH A 104 804 161 HOH HOH . Q 4 HOH A 105 805 190 HOH HOH . Q 4 HOH A 106 806 223 HOH HOH . Q 4 HOH A 107 807 108 HOH HOH . Q 4 HOH A 108 808 159 HOH HOH . R 4 HOH B 1 701 215 HOH HOH . R 4 HOH B 2 702 69 HOH HOH . R 4 HOH B 3 703 209 HOH HOH . R 4 HOH B 4 704 63 HOH HOH . R 4 HOH B 5 705 70 HOH HOH . R 4 HOH B 6 706 127 HOH HOH . R 4 HOH B 7 707 45 HOH HOH . R 4 HOH B 8 708 185 HOH HOH . R 4 HOH B 9 709 183 HOH HOH . R 4 HOH B 10 710 158 HOH HOH . R 4 HOH B 11 711 213 HOH HOH . R 4 HOH B 12 712 107 HOH HOH . R 4 HOH B 13 713 36 HOH HOH . R 4 HOH B 14 714 106 HOH HOH . R 4 HOH B 15 715 191 HOH HOH . R 4 HOH B 16 716 53 HOH HOH . R 4 HOH B 17 717 80 HOH HOH . R 4 HOH B 18 718 42 HOH HOH . R 4 HOH B 19 719 186 HOH HOH . R 4 HOH B 20 720 133 HOH HOH . R 4 HOH B 21 721 19 HOH HOH . R 4 HOH B 22 722 181 HOH HOH . R 4 HOH B 23 723 15 HOH HOH . R 4 HOH B 24 724 50 HOH HOH . R 4 HOH B 25 725 139 HOH HOH . R 4 HOH B 26 726 95 HOH HOH . R 4 HOH B 27 727 229 HOH HOH . R 4 HOH B 28 728 105 HOH HOH . R 4 HOH B 29 729 8 HOH HOH . R 4 HOH B 30 730 101 HOH HOH . R 4 HOH B 31 731 71 HOH HOH . R 4 HOH B 32 732 202 HOH HOH . R 4 HOH B 33 733 31 HOH HOH . R 4 HOH B 34 734 162 HOH HOH . R 4 HOH B 35 735 22 HOH HOH . R 4 HOH B 36 736 212 HOH HOH . R 4 HOH B 37 737 47 HOH HOH . R 4 HOH B 38 738 23 HOH HOH . R 4 HOH B 39 739 14 HOH HOH . R 4 HOH B 40 740 44 HOH HOH . R 4 HOH B 41 741 75 HOH HOH . R 4 HOH B 42 742 175 HOH HOH . R 4 HOH B 43 743 86 HOH HOH . R 4 HOH B 44 744 167 HOH HOH . R 4 HOH B 45 745 39 HOH HOH . R 4 HOH B 46 746 125 HOH HOH . R 4 HOH B 47 747 49 HOH HOH . R 4 HOH B 48 748 82 HOH HOH . R 4 HOH B 49 749 48 HOH HOH . R 4 HOH B 50 750 83 HOH HOH . R 4 HOH B 51 751 96 HOH HOH . R 4 HOH B 52 752 154 HOH HOH . R 4 HOH B 53 753 3 HOH HOH . R 4 HOH B 54 754 67 HOH HOH . R 4 HOH B 55 755 27 HOH HOH . R 4 HOH B 56 756 34 HOH HOH . R 4 HOH B 57 757 112 HOH HOH . R 4 HOH B 58 758 134 HOH HOH . R 4 HOH B 59 759 104 HOH HOH . R 4 HOH B 60 760 150 HOH HOH . R 4 HOH B 61 761 43 HOH HOH . R 4 HOH B 62 762 32 HOH HOH . R 4 HOH B 63 763 196 HOH HOH . R 4 HOH B 64 764 85 HOH HOH . R 4 HOH B 65 765 103 HOH HOH . R 4 HOH B 66 766 79 HOH HOH . R 4 HOH B 67 767 7 HOH HOH . R 4 HOH B 68 768 20 HOH HOH . R 4 HOH B 69 769 198 HOH HOH . R 4 HOH B 70 770 197 HOH HOH . R 4 HOH B 71 771 147 HOH HOH . R 4 HOH B 72 772 93 HOH HOH . R 4 HOH B 73 773 91 HOH HOH . R 4 HOH B 74 774 110 HOH HOH . R 4 HOH B 75 775 41 HOH HOH . R 4 HOH B 76 776 122 HOH HOH . R 4 HOH B 77 777 153 HOH HOH . R 4 HOH B 78 778 113 HOH HOH . R 4 HOH B 79 779 187 HOH HOH . R 4 HOH B 80 780 226 HOH HOH . R 4 HOH B 81 781 88 HOH HOH . R 4 HOH B 82 782 65 HOH HOH . R 4 HOH B 83 783 121 HOH HOH . R 4 HOH B 84 784 2 HOH HOH . R 4 HOH B 85 785 189 HOH HOH . R 4 HOH B 86 786 87 HOH HOH . R 4 HOH B 87 787 119 HOH HOH . R 4 HOH B 88 788 117 HOH HOH . R 4 HOH B 89 789 203 HOH HOH . R 4 HOH B 90 790 17 HOH HOH . R 4 HOH B 91 791 57 HOH HOH . R 4 HOH B 92 792 129 HOH HOH . R 4 HOH B 93 793 56 HOH HOH . R 4 HOH B 94 794 171 HOH HOH . R 4 HOH B 95 795 131 HOH HOH . R 4 HOH B 96 796 21 HOH HOH . R 4 HOH B 97 797 130 HOH HOH . R 4 HOH B 98 798 155 HOH HOH . R 4 HOH B 99 799 60 HOH HOH . R 4 HOH B 100 800 64 HOH HOH . R 4 HOH B 101 801 145 HOH HOH . R 4 HOH B 102 802 211 HOH HOH . R 4 HOH B 103 803 160 HOH HOH . R 4 HOH B 104 804 227 HOH HOH . R 4 HOH B 105 805 225 HOH HOH . R 4 HOH B 106 806 84 HOH HOH . R 4 HOH B 107 807 30 HOH HOH . R 4 HOH B 108 808 228 HOH HOH . R 4 HOH B 109 809 99 HOH HOH . R 4 HOH B 110 810 135 HOH HOH . R 4 HOH B 111 811 146 HOH HOH . R 4 HOH B 112 812 114 HOH HOH . R 4 HOH B 113 813 144 HOH HOH . R 4 HOH B 114 814 173 HOH HOH . R 4 HOH B 115 815 149 HOH HOH . R 4 HOH B 116 816 132 HOH HOH . R 4 HOH B 117 817 182 HOH HOH . R 4 HOH B 118 818 219 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . L 2 -27.689 35.184 33.714 1 49.67 ? C1 EDO 603 B 1 HETATM 2 O O1 EDO . . . L 2 -26.519 35.941 34.037 1 41.61 ? O1 EDO 603 B 1 HETATM 3 C C2 EDO . . . L 2 -28.182 35.06 32.221 1 51.96 ? C2 EDO 603 B 1 HETATM 4 O O2 EDO . . . L 2 -27.691 35.999 31.246 1 39.88 ? O2 EDO 603 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #