data_6I5K
#
_model_server_result.job_id            D1fFPCKnWOF49YbjWatZhw 
_model_server_result.datetime_utc      '2024-10-13 11:22:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6i5k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":502}' 
#
_entry.id    6I5K 
#
_exptl.entry_id    6I5K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.08 
_cell.angle_gamma         90 
_cell.entry_id            6I5K 
_cell.length_a            57.089 
_cell.length_b            117.79 
_cell.length_c            92.42 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6I5K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,O 1 1 
B,G,H,I,J,P 2 1 
C,K,L,M,N,Q 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 L N N 
? 2 M N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6I5K 
_atom_sites.fract_transf_matrix[1][1]    0.017517 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002799 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00849 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010958 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 GOL A 1 501 2 GOL GOL . 
E 2 GOL A 1 502 6 GOL GOL . 
F 3 H3H A 1 503 1 H3H XXX . 
G 2 GOL B 1 501 1 GOL GOL . 
H 2 GOL B 1 502 3 GOL GOL . 
I 2 GOL B 1 503 5 GOL GOL . 
J 3 H3H B 1 504 2 H3H XXX . 
K 4 PO4 C 1 501 1 PO4 PO4 . 
L 2 GOL C 1 502 4 GOL GOL . 
M 2 GOL C 1 503 7 GOL GOL . 
N 3 H3H C 1 504 3 H3H XXX . 
O 5 HOH A 1 601 41 HOH HOH . 
O 5 HOH A 2 602 123 HOH HOH . 
O 5 HOH A 3 603 86 HOH HOH . 
O 5 HOH A 4 604 162 HOH HOH . 
O 5 HOH A 5 605 114 HOH HOH . 
O 5 HOH A 6 606 165 HOH HOH . 
O 5 HOH A 7 607 127 HOH HOH . 
O 5 HOH A 8 608 77 HOH HOH . 
O 5 HOH A 9 609 172 HOH HOH . 
O 5 HOH A 10 610 75 HOH HOH . 
O 5 HOH A 11 611 33 HOH HOH . 
O 5 HOH A 12 612 113 HOH HOH . 
O 5 HOH A 13 613 94 HOH HOH . 
O 5 HOH A 14 614 6 HOH HOH . 
O 5 HOH A 15 615 90 HOH HOH . 
O 5 HOH A 16 616 65 HOH HOH . 
O 5 HOH A 17 617 160 HOH HOH . 
O 5 HOH A 18 618 131 HOH HOH . 
O 5 HOH A 19 619 156 HOH HOH . 
O 5 HOH A 20 620 36 HOH HOH . 
O 5 HOH A 21 621 42 HOH HOH . 
O 5 HOH A 22 622 102 HOH HOH . 
O 5 HOH A 23 623 51 HOH HOH . 
O 5 HOH A 24 624 87 HOH HOH . 
O 5 HOH A 25 625 191 HOH HOH . 
O 5 HOH A 26 626 16 HOH HOH . 
O 5 HOH A 27 627 111 HOH HOH . 
O 5 HOH A 28 628 83 HOH HOH . 
O 5 HOH A 29 629 186 HOH HOH . 
O 5 HOH A 30 630 185 HOH HOH . 
O 5 HOH A 31 631 30 HOH HOH . 
O 5 HOH A 32 632 178 HOH HOH . 
O 5 HOH A 33 633 133 HOH HOH . 
O 5 HOH A 34 634 49 HOH HOH . 
O 5 HOH A 35 635 187 HOH HOH . 
O 5 HOH A 36 636 28 HOH HOH . 
O 5 HOH A 37 637 24 HOH HOH . 
O 5 HOH A 38 638 175 HOH HOH . 
O 5 HOH A 39 639 121 HOH HOH . 
O 5 HOH A 40 640 104 HOH HOH . 
O 5 HOH A 41 641 45 HOH HOH . 
O 5 HOH A 42 642 171 HOH HOH . 
O 5 HOH A 43 643 18 HOH HOH . 
O 5 HOH A 44 644 1 HOH HOH . 
O 5 HOH A 45 645 119 HOH HOH . 
O 5 HOH A 46 646 188 HOH HOH . 
O 5 HOH A 47 647 25 HOH HOH . 
O 5 HOH A 48 648 179 HOH HOH . 
O 5 HOH A 49 649 9 HOH HOH . 
O 5 HOH A 50 650 67 HOH HOH . 
O 5 HOH A 51 651 170 HOH HOH . 
O 5 HOH A 52 652 97 HOH HOH . 
O 5 HOH A 53 653 189 HOH HOH . 
O 5 HOH A 54 654 105 HOH HOH . 
O 5 HOH A 55 655 161 HOH HOH . 
O 5 HOH A 56 656 181 HOH HOH . 
O 5 HOH A 57 657 168 HOH HOH . 
O 5 HOH A 58 658 120 HOH HOH . 
O 5 HOH A 59 659 8 HOH HOH . 
O 5 HOH A 60 660 192 HOH HOH . 
O 5 HOH A 61 661 99 HOH HOH . 
O 5 HOH A 62 662 117 HOH HOH . 
O 5 HOH A 63 663 163 HOH HOH . 
O 5 HOH A 64 664 166 HOH HOH . 
O 5 HOH A 65 665 266 HOH HOH . 
O 5 HOH A 66 666 174 HOH HOH . 
O 5 HOH A 67 667 183 HOH HOH . 
O 5 HOH A 68 668 157 HOH HOH . 
O 5 HOH A 69 669 182 HOH HOH . 
O 5 HOH A 70 670 169 HOH HOH . 
O 5 HOH A 71 671 167 HOH HOH . 
O 5 HOH A 72 672 177 HOH HOH . 
O 5 HOH A 73 673 176 HOH HOH . 
O 5 HOH A 74 674 148 HOH HOH . 
O 5 HOH A 75 675 173 HOH HOH . 
O 5 HOH A 76 676 184 HOH HOH . 
O 5 HOH A 77 677 147 HOH HOH . 
O 5 HOH A 78 678 152 HOH HOH . 
P 5 HOH B 1 601 237 HOH HOH . 
P 5 HOH B 2 602 180 HOH HOH . 
P 5 HOH B 3 603 27 HOH HOH . 
P 5 HOH B 4 604 212 HOH HOH . 
P 5 HOH B 5 605 43 HOH HOH . 
P 5 HOH B 6 606 216 HOH HOH . 
P 5 HOH B 7 607 50 HOH HOH . 
P 5 HOH B 8 608 201 HOH HOH . 
P 5 HOH B 9 609 7 HOH HOH . 
P 5 HOH B 10 610 101 HOH HOH . 
P 5 HOH B 11 611 209 HOH HOH . 
P 5 HOH B 12 612 203 HOH HOH . 
P 5 HOH B 13 613 29 HOH HOH . 
P 5 HOH B 14 614 202 HOH HOH . 
P 5 HOH B 15 615 219 HOH HOH . 
P 5 HOH B 16 616 110 HOH HOH . 
P 5 HOH B 17 617 59 HOH HOH . 
P 5 HOH B 18 618 32 HOH HOH . 
P 5 HOH B 19 619 91 HOH HOH . 
P 5 HOH B 20 620 214 HOH HOH . 
P 5 HOH B 21 621 207 HOH HOH . 
P 5 HOH B 22 622 200 HOH HOH . 
P 5 HOH B 23 623 21 HOH HOH . 
P 5 HOH B 24 624 269 HOH HOH . 
P 5 HOH B 25 625 190 HOH HOH . 
P 5 HOH B 26 626 205 HOH HOH . 
P 5 HOH B 27 627 52 HOH HOH . 
P 5 HOH B 28 628 20 HOH HOH . 
P 5 HOH B 29 629 208 HOH HOH . 
P 5 HOH B 30 630 100 HOH HOH . 
P 5 HOH B 31 631 220 HOH HOH . 
P 5 HOH B 32 632 118 HOH HOH . 
P 5 HOH B 33 633 46 HOH HOH . 
P 5 HOH B 34 634 135 HOH HOH . 
P 5 HOH B 35 635 15 HOH HOH . 
P 5 HOH B 36 636 122 HOH HOH . 
P 5 HOH B 37 637 126 HOH HOH . 
P 5 HOH B 38 638 26 HOH HOH . 
P 5 HOH B 39 639 89 HOH HOH . 
P 5 HOH B 40 640 95 HOH HOH . 
P 5 HOH B 41 641 63 HOH HOH . 
P 5 HOH B 42 642 218 HOH HOH . 
P 5 HOH B 43 643 84 HOH HOH . 
P 5 HOH B 44 644 217 HOH HOH . 
P 5 HOH B 45 645 199 HOH HOH . 
P 5 HOH B 46 646 22 HOH HOH . 
P 5 HOH B 47 647 57 HOH HOH . 
P 5 HOH B 48 648 197 HOH HOH . 
P 5 HOH B 49 649 196 HOH HOH . 
P 5 HOH B 50 650 223 HOH HOH . 
P 5 HOH B 51 651 211 HOH HOH . 
P 5 HOH B 52 652 215 HOH HOH . 
P 5 HOH B 53 653 17 HOH HOH . 
P 5 HOH B 54 654 195 HOH HOH . 
P 5 HOH B 55 655 79 HOH HOH . 
P 5 HOH B 56 656 198 HOH HOH . 
P 5 HOH B 57 657 213 HOH HOH . 
P 5 HOH B 58 658 206 HOH HOH . 
P 5 HOH B 59 659 96 HOH HOH . 
P 5 HOH B 60 660 204 HOH HOH . 
P 5 HOH B 61 661 71 HOH HOH . 
P 5 HOH B 62 662 193 HOH HOH . 
P 5 HOH B 63 663 210 HOH HOH . 
P 5 HOH B 64 664 136 HOH HOH . 
P 5 HOH B 65 665 53 HOH HOH . 
P 5 HOH B 66 666 231 HOH HOH . 
P 5 HOH B 67 667 129 HOH HOH . 
P 5 HOH B 68 668 58 HOH HOH . 
P 5 HOH B 69 669 47 HOH HOH . 
Q 5 HOH C 1 601 260 HOH HOH . 
Q 5 HOH C 2 602 222 HOH HOH . 
Q 5 HOH C 3 603 235 HOH HOH . 
Q 5 HOH C 4 604 232 HOH HOH . 
Q 5 HOH C 5 605 259 HOH HOH . 
Q 5 HOH C 6 606 262 HOH HOH . 
Q 5 HOH C 7 607 40 HOH HOH . 
Q 5 HOH C 8 608 112 HOH HOH . 
Q 5 HOH C 9 609 142 HOH HOH . 
Q 5 HOH C 10 610 265 HOH HOH . 
Q 5 HOH C 11 611 238 HOH HOH . 
Q 5 HOH C 12 612 134 HOH HOH . 
Q 5 HOH C 13 613 68 HOH HOH . 
Q 5 HOH C 14 614 228 HOH HOH . 
Q 5 HOH C 15 615 239 HOH HOH . 
Q 5 HOH C 16 616 225 HOH HOH . 
Q 5 HOH C 17 617 85 HOH HOH . 
Q 5 HOH C 18 618 12 HOH HOH . 
Q 5 HOH C 19 619 224 HOH HOH . 
Q 5 HOH C 20 620 35 HOH HOH . 
Q 5 HOH C 21 621 234 HOH HOH . 
Q 5 HOH C 22 622 10 HOH HOH . 
Q 5 HOH C 23 623 109 HOH HOH . 
Q 5 HOH C 24 624 11 HOH HOH . 
Q 5 HOH C 25 625 229 HOH HOH . 
Q 5 HOH C 26 626 154 HOH HOH . 
Q 5 HOH C 27 627 82 HOH HOH . 
Q 5 HOH C 28 628 106 HOH HOH . 
Q 5 HOH C 29 629 19 HOH HOH . 
Q 5 HOH C 30 630 261 HOH HOH . 
Q 5 HOH C 31 631 257 HOH HOH . 
Q 5 HOH C 32 632 256 HOH HOH . 
Q 5 HOH C 33 633 116 HOH HOH . 
Q 5 HOH C 34 634 246 HOH HOH . 
Q 5 HOH C 35 635 55 HOH HOH . 
Q 5 HOH C 36 636 227 HOH HOH . 
Q 5 HOH C 37 637 264 HOH HOH . 
Q 5 HOH C 38 638 64 HOH HOH . 
Q 5 HOH C 39 639 251 HOH HOH . 
Q 5 HOH C 40 640 155 HOH HOH . 
Q 5 HOH C 41 641 247 HOH HOH . 
Q 5 HOH C 42 642 252 HOH HOH . 
Q 5 HOH C 43 643 230 HOH HOH . 
Q 5 HOH C 44 644 73 HOH HOH . 
Q 5 HOH C 45 645 115 HOH HOH . 
Q 5 HOH C 46 646 240 HOH HOH . 
Q 5 HOH C 47 647 254 HOH HOH . 
Q 5 HOH C 48 648 31 HOH HOH . 
Q 5 HOH C 49 649 88 HOH HOH . 
Q 5 HOH C 50 650 241 HOH HOH . 
Q 5 HOH C 51 651 72 HOH HOH . 
Q 5 HOH C 52 652 243 HOH HOH . 
Q 5 HOH C 53 653 125 HOH HOH . 
Q 5 HOH C 54 654 76 HOH HOH . 
Q 5 HOH C 55 655 253 HOH HOH . 
Q 5 HOH C 56 656 245 HOH HOH . 
Q 5 HOH C 57 657 263 HOH HOH . 
Q 5 HOH C 58 658 3 HOH HOH . 
Q 5 HOH C 59 659 48 HOH HOH . 
Q 5 HOH C 60 660 242 HOH HOH . 
Q 5 HOH C 61 661 108 HOH HOH . 
Q 5 HOH C 62 662 258 HOH HOH . 
Q 5 HOH C 63 663 250 HOH HOH . 
Q 5 HOH C 64 664 233 HOH HOH . 
Q 5 HOH C 65 665 249 HOH HOH . 
Q 5 HOH C 66 666 244 HOH HOH . 
Q 5 HOH C 67 667 221 HOH HOH . 
Q 5 HOH C 68 668 267 HOH HOH . 
Q 5 HOH C 69 669 153 HOH HOH . 
Q 5 HOH C 70 670 226 HOH HOH . 
Q 5 HOH C 71 671 268 HOH HOH . 
Q 5 HOH C 72 672 143 HOH HOH . 
Q 5 HOH C 73 673 146 HOH HOH . 
Q 5 HOH C 74 674 255 HOH HOH . 
Q 5 HOH C 75 675 248 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 2 28.772 7.967 33.361 1 64.91 ? C1 GOL 502 A 1 
HETATM 2 O O1 GOL . . . E 2 28.809 6.553 33.125 1 54.95 ? O1 GOL 502 A 1 
HETATM 3 C C2 GOL . . . E 2 27.68 8.317 34.38 1 68.19 ? C2 GOL 502 A 1 
HETATM 4 O O2 GOL . . . E 2 26.933 9.445 33.912 1 68.04 ? O2 GOL 502 A 1 
HETATM 5 C C3 GOL . . . E 2 28.264 8.666 35.754 1 72.55 ? C3 GOL 502 A 1 
HETATM 6 O O3 GOL . . . E 2 27.288 8.443 36.787 1 76.94 ? O3 GOL 502 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#