data_6I60 # _model_server_result.job_id jZ1VE7yQzhNE1QXJXE9pjg _model_server_result.datetime_utc '2024-11-23 12:22:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1003}' # _entry.id 6I60 # _exptl.entry_id 6I60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 132.14 _cell.angle_gamma 90 _cell.entry_id 6I60 _cell.length_a 173.22 _cell.length_b 161.53 _cell.length_c 124.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,S 1 1 B,M,N,O,P,Q,R,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 O N N ? 2 P N N ? 2 Q N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 259 n n C1 C2 PGE sing 260 n n C1 H1 PGE sing 261 n n C1 H12 PGE sing 262 n n O1 HO1 PGE sing 263 n n C2 O2 PGE sing 264 n n C2 H2 PGE sing 265 n n C2 H22 PGE sing 266 n n O2 C3 PGE sing 267 n n C3 C4 PGE sing 268 n n C3 H3 PGE sing 269 n n C3 H32 PGE sing 270 n n C4 O3 PGE sing 271 n n C4 H4 PGE sing 272 n n C4 H42 PGE sing 273 n n O4 C6 PGE sing 274 n n O4 HO4 PGE sing 275 n n C6 C5 PGE sing 276 n n C6 H6 PGE sing 277 n n C6 H62 PGE sing 278 n n C5 O3 PGE sing 279 n n C5 H5 PGE sing 280 n n C5 H52 PGE sing 281 n n # _atom_sites.entry_id 6I60 _atom_sites.fract_transf_matrix[1][1] 0.005773 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005224 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006191 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 1001 4 PGE PGE . D 2 PGE A 1 1002 7 PGE PGE . E 2 PGE A 1 1003 8 PGE PGE . F 2 PGE A 1 1004 9 PGE PGE . G 3 AE3 A 1 1005 11 AE3 PGE . H 3 AE3 A 1 1006 13 AE3 PGE . I 2 PGE A 1 1007 15 PGE PGE . J 2 PGE A 1 1008 17 PGE PGE . K 2 PGE A 1 1009 18 PGE PGE . L 2 PGE A 1 1010 19 PGE PGE . M 3 AE3 B 1 1001 3 AE3 PGE . N 3 AE3 B 1 1002 5 AE3 PGE . O 2 PGE B 1 1003 6 PGE PGE . P 2 PGE B 1 1004 10 PGE PGE . Q 2 PGE B 1 1005 12 PGE PGE . R 3 AE3 B 1 1006 16 AE3 PGE . S 4 HOH A 1 1101 245 HOH HOH . S 4 HOH A 2 1102 244 HOH HOH . S 4 HOH A 3 1103 210 HOH HOH . S 4 HOH A 4 1104 108 HOH HOH . S 4 HOH A 5 1105 246 HOH HOH . S 4 HOH A 6 1106 247 HOH HOH . S 4 HOH A 7 1107 141 HOH HOH . S 4 HOH A 8 1108 7 HOH HOH . S 4 HOH A 9 1109 198 HOH HOH . S 4 HOH A 10 1110 111 HOH HOH . S 4 HOH A 11 1111 235 HOH HOH . S 4 HOH A 12 1112 50 HOH HOH . S 4 HOH A 13 1113 38 HOH HOH . S 4 HOH A 14 1114 234 HOH HOH . S 4 HOH A 15 1115 178 HOH HOH . S 4 HOH A 16 1116 194 HOH HOH . S 4 HOH A 17 1117 211 HOH HOH . S 4 HOH A 18 1118 237 HOH HOH . S 4 HOH A 19 1119 43 HOH HOH . S 4 HOH A 20 1120 157 HOH HOH . S 4 HOH A 21 1121 144 HOH HOH . S 4 HOH A 22 1122 120 HOH HOH . S 4 HOH A 23 1123 55 HOH HOH . S 4 HOH A 24 1124 46 HOH HOH . S 4 HOH A 25 1125 192 HOH HOH . S 4 HOH A 26 1126 187 HOH HOH . S 4 HOH A 27 1127 5 HOH HOH . S 4 HOH A 28 1128 15 HOH HOH . S 4 HOH A 29 1129 199 HOH HOH . S 4 HOH A 30 1130 17 HOH HOH . S 4 HOH A 31 1131 165 HOH HOH . S 4 HOH A 32 1132 229 HOH HOH . S 4 HOH A 33 1133 238 HOH HOH . S 4 HOH A 34 1134 105 HOH HOH . S 4 HOH A 35 1135 209 HOH HOH . S 4 HOH A 36 1136 160 HOH HOH . S 4 HOH A 37 1137 248 HOH HOH . S 4 HOH A 38 1138 227 HOH HOH . S 4 HOH A 39 1139 206 HOH HOH . S 4 HOH A 40 1140 213 HOH HOH . S 4 HOH A 41 1141 101 HOH HOH . S 4 HOH A 42 1142 21 HOH HOH . S 4 HOH A 43 1143 92 HOH HOH . S 4 HOH A 44 1144 11 HOH HOH . S 4 HOH A 45 1145 221 HOH HOH . S 4 HOH A 46 1146 63 HOH HOH . S 4 HOH A 47 1147 212 HOH HOH . S 4 HOH A 48 1148 42 HOH HOH . S 4 HOH A 49 1149 95 HOH HOH . S 4 HOH A 50 1150 167 HOH HOH . S 4 HOH A 51 1151 58 HOH HOH . S 4 HOH A 52 1152 18 HOH HOH . S 4 HOH A 53 1153 197 HOH HOH . S 4 HOH A 54 1154 94 HOH HOH . S 4 HOH A 55 1155 57 HOH HOH . S 4 HOH A 56 1156 78 HOH HOH . S 4 HOH A 57 1157 155 HOH HOH . S 4 HOH A 58 1158 79 HOH HOH . S 4 HOH A 59 1159 195 HOH HOH . S 4 HOH A 60 1160 186 HOH HOH . S 4 HOH A 61 1161 200 HOH HOH . S 4 HOH A 62 1162 170 HOH HOH . S 4 HOH A 63 1163 236 HOH HOH . S 4 HOH A 64 1164 239 HOH HOH . S 4 HOH A 65 1165 98 HOH HOH . S 4 HOH A 66 1166 222 HOH HOH . S 4 HOH A 67 1167 184 HOH HOH . S 4 HOH A 68 1168 175 HOH HOH . S 4 HOH A 69 1169 177 HOH HOH . S 4 HOH A 70 1170 140 HOH HOH . S 4 HOH A 71 1171 163 HOH HOH . S 4 HOH A 72 1172 154 HOH HOH . S 4 HOH A 73 1173 114 HOH HOH . S 4 HOH A 74 1174 89 HOH HOH . S 4 HOH A 75 1175 69 HOH HOH . S 4 HOH A 76 1176 158 HOH HOH . S 4 HOH A 77 1177 226 HOH HOH . S 4 HOH A 78 1178 242 HOH HOH . S 4 HOH A 79 1179 142 HOH HOH . S 4 HOH A 80 1180 135 HOH HOH . S 4 HOH A 81 1181 126 HOH HOH . T 4 HOH B 1 1101 228 HOH HOH . T 4 HOH B 2 1102 218 HOH HOH . T 4 HOH B 3 1103 14 HOH HOH . T 4 HOH B 4 1104 223 HOH HOH . T 4 HOH B 5 1105 85 HOH HOH . T 4 HOH B 6 1106 230 HOH HOH . T 4 HOH B 7 1107 173 HOH HOH . T 4 HOH B 8 1108 219 HOH HOH . T 4 HOH B 9 1109 119 HOH HOH . T 4 HOH B 10 1110 225 HOH HOH . T 4 HOH B 11 1111 193 HOH HOH . T 4 HOH B 12 1112 145 HOH HOH . T 4 HOH B 13 1113 220 HOH HOH . T 4 HOH B 14 1114 4 HOH HOH . T 4 HOH B 15 1115 65 HOH HOH . T 4 HOH B 16 1116 23 HOH HOH . T 4 HOH B 17 1117 64 HOH HOH . T 4 HOH B 18 1118 132 HOH HOH . T 4 HOH B 19 1119 196 HOH HOH . T 4 HOH B 20 1120 189 HOH HOH . T 4 HOH B 21 1121 93 HOH HOH . T 4 HOH B 22 1122 31 HOH HOH . T 4 HOH B 23 1123 250 HOH HOH . T 4 HOH B 24 1124 240 HOH HOH . T 4 HOH B 25 1125 138 HOH HOH . T 4 HOH B 26 1126 129 HOH HOH . T 4 HOH B 27 1127 9 HOH HOH . T 4 HOH B 28 1128 241 HOH HOH . T 4 HOH B 29 1129 62 HOH HOH . T 4 HOH B 30 1130 30 HOH HOH . T 4 HOH B 31 1131 70 HOH HOH . T 4 HOH B 32 1132 208 HOH HOH . T 4 HOH B 33 1133 159 HOH HOH . T 4 HOH B 34 1134 90 HOH HOH . T 4 HOH B 35 1135 156 HOH HOH . T 4 HOH B 36 1136 10 HOH HOH . T 4 HOH B 37 1137 40 HOH HOH . T 4 HOH B 38 1138 216 HOH HOH . T 4 HOH B 39 1139 28 HOH HOH . T 4 HOH B 40 1140 22 HOH HOH . T 4 HOH B 41 1141 84 HOH HOH . T 4 HOH B 42 1142 8 HOH HOH . T 4 HOH B 43 1143 59 HOH HOH . T 4 HOH B 44 1144 81 HOH HOH . T 4 HOH B 45 1145 190 HOH HOH . T 4 HOH B 46 1146 3 HOH HOH . T 4 HOH B 47 1147 215 HOH HOH . T 4 HOH B 48 1148 32 HOH HOH . T 4 HOH B 49 1149 35 HOH HOH . T 4 HOH B 50 1150 249 HOH HOH . T 4 HOH B 51 1151 41 HOH HOH . T 4 HOH B 52 1152 67 HOH HOH . T 4 HOH B 53 1153 146 HOH HOH . T 4 HOH B 54 1154 179 HOH HOH . T 4 HOH B 55 1155 150 HOH HOH . T 4 HOH B 56 1156 73 HOH HOH . T 4 HOH B 57 1157 243 HOH HOH . T 4 HOH B 58 1158 137 HOH HOH . T 4 HOH B 59 1159 66 HOH HOH . T 4 HOH B 60 1160 102 HOH HOH . T 4 HOH B 61 1161 232 HOH HOH . T 4 HOH B 62 1162 87 HOH HOH . T 4 HOH B 63 1163 60 HOH HOH . T 4 HOH B 64 1164 68 HOH HOH . T 4 HOH B 65 1165 37 HOH HOH . T 4 HOH B 66 1166 231 HOH HOH . T 4 HOH B 67 1167 61 HOH HOH . T 4 HOH B 68 1168 143 HOH HOH . T 4 HOH B 69 1169 147 HOH HOH . T 4 HOH B 70 1170 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . O 2 -41.908 -71.381 -42.74 1 69.21 ? C1 PGE 1003 B 1 HETATM 2 O O1 PGE . . . O 2 -41.439 -72.151 -43.839 1 74.56 ? O1 PGE 1003 B 1 HETATM 3 C C2 PGE . . . O 2 -42.36 -70.023 -43.239 1 66.94 ? C2 PGE 1003 B 1 HETATM 4 O O2 PGE . . . O 2 -41.306 -69.401 -43.946 1 68.78 ? O2 PGE 1003 B 1 HETATM 5 C C3 PGE . . . O 2 -41.574 -68.051 -44.271 1 73.43 ? C3 PGE 1003 B 1 HETATM 6 C C4 PGE . . . O 2 -40.522 -67.55 -45.243 1 75.31 ? C4 PGE 1003 B 1 HETATM 7 O O4 PGE . . . O 2 -38.479 -69.125 -49.105 1 69.57 ? O4 PGE 1003 B 1 HETATM 8 C C6 PGE . . . O 2 -39.781 -68.864 -48.595 1 87.13 ? C6 PGE 1003 B 1 HETATM 9 C C5 PGE . . . O 2 -39.676 -67.904 -47.425 1 86.92 ? C5 PGE 1003 B 1 HETATM 10 O O3 PGE . . . O 2 -40.716 -68.163 -46.502 1 84.64 ? O3 PGE 1003 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #