data_6I66 # _model_server_result.job_id uQMPw9aAYOPcaeiogQt4Iw _model_server_result.datetime_utc '2024-10-12 12:23:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i66 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 6I66 # _exptl.entry_id 6I66 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I66 _cell.length_a 64.35 _cell.length_b 64.35 _cell.length_c 135.792 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I66 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -67.896 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6I66 _atom_sites.fract_transf_matrix[1][1] 0.01554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007364 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H4Q A 1 501 1 H4Q DRG . C 3 GOL A 1 502 1 GOL GOL . D 3 GOL A 1 503 2 GOL GOL . E 4 HOH A 1 601 324 HOH HOH . E 4 HOH A 2 602 228 HOH HOH . E 4 HOH A 3 603 75 HOH HOH . E 4 HOH A 4 604 311 HOH HOH . E 4 HOH A 5 605 65 HOH HOH . E 4 HOH A 6 606 98 HOH HOH . E 4 HOH A 7 607 248 HOH HOH . E 4 HOH A 8 608 179 HOH HOH . E 4 HOH A 9 609 207 HOH HOH . E 4 HOH A 10 610 108 HOH HOH . E 4 HOH A 11 611 294 HOH HOH . E 4 HOH A 12 612 327 HOH HOH . E 4 HOH A 13 613 132 HOH HOH . E 4 HOH A 14 614 189 HOH HOH . E 4 HOH A 15 615 134 HOH HOH . E 4 HOH A 16 616 16 HOH HOH . E 4 HOH A 17 617 194 HOH HOH . E 4 HOH A 18 618 158 HOH HOH . E 4 HOH A 19 619 53 HOH HOH . E 4 HOH A 20 620 199 HOH HOH . E 4 HOH A 21 621 197 HOH HOH . E 4 HOH A 22 622 70 HOH HOH . E 4 HOH A 23 623 56 HOH HOH . E 4 HOH A 24 624 325 HOH HOH . E 4 HOH A 25 625 34 HOH HOH . E 4 HOH A 26 626 297 HOH HOH . E 4 HOH A 27 627 217 HOH HOH . E 4 HOH A 28 628 29 HOH HOH . E 4 HOH A 29 629 321 HOH HOH . E 4 HOH A 30 630 36 HOH HOH . E 4 HOH A 31 631 20 HOH HOH . E 4 HOH A 32 632 150 HOH HOH . E 4 HOH A 33 633 88 HOH HOH . E 4 HOH A 34 634 77 HOH HOH . E 4 HOH A 35 635 168 HOH HOH . E 4 HOH A 36 636 115 HOH HOH . E 4 HOH A 37 637 289 HOH HOH . E 4 HOH A 38 638 144 HOH HOH . E 4 HOH A 39 639 87 HOH HOH . E 4 HOH A 40 640 156 HOH HOH . E 4 HOH A 41 641 314 HOH HOH . E 4 HOH A 42 642 5 HOH HOH . E 4 HOH A 43 643 109 HOH HOH . E 4 HOH A 44 644 226 HOH HOH . E 4 HOH A 45 645 63 HOH HOH . E 4 HOH A 46 646 93 HOH HOH . E 4 HOH A 47 647 17 HOH HOH . E 4 HOH A 48 648 41 HOH HOH . E 4 HOH A 49 649 219 HOH HOH . E 4 HOH A 50 650 81 HOH HOH . E 4 HOH A 51 651 62 HOH HOH . E 4 HOH A 52 652 112 HOH HOH . E 4 HOH A 53 653 42 HOH HOH . E 4 HOH A 54 654 97 HOH HOH . E 4 HOH A 55 655 83 HOH HOH . E 4 HOH A 56 656 119 HOH HOH . E 4 HOH A 57 657 90 HOH HOH . E 4 HOH A 58 658 214 HOH HOH . E 4 HOH A 59 659 59 HOH HOH . E 4 HOH A 60 660 124 HOH HOH . E 4 HOH A 61 661 233 HOH HOH . E 4 HOH A 62 662 1 HOH HOH . E 4 HOH A 63 663 9 HOH HOH . E 4 HOH A 64 664 24 HOH HOH . E 4 HOH A 65 665 7 HOH HOH . E 4 HOH A 66 666 100 HOH HOH . E 4 HOH A 67 667 6 HOH HOH . E 4 HOH A 68 668 237 HOH HOH . E 4 HOH A 69 669 45 HOH HOH . E 4 HOH A 70 670 155 HOH HOH . E 4 HOH A 71 671 52 HOH HOH . E 4 HOH A 72 672 130 HOH HOH . E 4 HOH A 73 673 216 HOH HOH . E 4 HOH A 74 674 142 HOH HOH . E 4 HOH A 75 675 185 HOH HOH . E 4 HOH A 76 676 222 HOH HOH . E 4 HOH A 77 677 141 HOH HOH . E 4 HOH A 78 678 204 HOH HOH . E 4 HOH A 79 679 3 HOH HOH . E 4 HOH A 80 680 58 HOH HOH . E 4 HOH A 81 681 131 HOH HOH . E 4 HOH A 82 682 319 HOH HOH . E 4 HOH A 83 683 305 HOH HOH . E 4 HOH A 84 684 79 HOH HOH . E 4 HOH A 85 685 72 HOH HOH . E 4 HOH A 86 686 89 HOH HOH . E 4 HOH A 87 687 198 HOH HOH . E 4 HOH A 88 688 210 HOH HOH . E 4 HOH A 89 689 50 HOH HOH . E 4 HOH A 90 690 15 HOH HOH . E 4 HOH A 91 691 47 HOH HOH . E 4 HOH A 92 692 136 HOH HOH . E 4 HOH A 93 693 69 HOH HOH . E 4 HOH A 94 694 46 HOH HOH . E 4 HOH A 95 695 23 HOH HOH . E 4 HOH A 96 696 304 HOH HOH . E 4 HOH A 97 697 202 HOH HOH . E 4 HOH A 98 698 315 HOH HOH . E 4 HOH A 99 699 12 HOH HOH . E 4 HOH A 100 700 48 HOH HOH . E 4 HOH A 101 701 140 HOH HOH . E 4 HOH A 102 702 241 HOH HOH . E 4 HOH A 103 703 287 HOH HOH . E 4 HOH A 104 704 227 HOH HOH . E 4 HOH A 105 705 295 HOH HOH . E 4 HOH A 106 706 149 HOH HOH . E 4 HOH A 107 707 2 HOH HOH . E 4 HOH A 108 708 232 HOH HOH . E 4 HOH A 109 709 38 HOH HOH . E 4 HOH A 110 710 26 HOH HOH . E 4 HOH A 111 711 37 HOH HOH . E 4 HOH A 112 712 206 HOH HOH . E 4 HOH A 113 713 244 HOH HOH . E 4 HOH A 114 714 66 HOH HOH . E 4 HOH A 115 715 298 HOH HOH . E 4 HOH A 116 716 118 HOH HOH . E 4 HOH A 117 717 13 HOH HOH . E 4 HOH A 118 718 238 HOH HOH . E 4 HOH A 119 719 64 HOH HOH . E 4 HOH A 120 720 196 HOH HOH . E 4 HOH A 121 721 39 HOH HOH . E 4 HOH A 122 722 121 HOH HOH . E 4 HOH A 123 723 257 HOH HOH . E 4 HOH A 124 724 146 HOH HOH . E 4 HOH A 125 725 80 HOH HOH . E 4 HOH A 126 726 8 HOH HOH . E 4 HOH A 127 727 14 HOH HOH . E 4 HOH A 128 728 128 HOH HOH . E 4 HOH A 129 729 78 HOH HOH . E 4 HOH A 130 730 94 HOH HOH . E 4 HOH A 131 731 106 HOH HOH . E 4 HOH A 132 732 277 HOH HOH . E 4 HOH A 133 733 230 HOH HOH . E 4 HOH A 134 734 21 HOH HOH . E 4 HOH A 135 735 113 HOH HOH . E 4 HOH A 136 736 40 HOH HOH . E 4 HOH A 137 737 135 HOH HOH . E 4 HOH A 138 738 33 HOH HOH . E 4 HOH A 139 739 60 HOH HOH . E 4 HOH A 140 740 35 HOH HOH . E 4 HOH A 141 741 18 HOH HOH . E 4 HOH A 142 742 171 HOH HOH . E 4 HOH A 143 743 148 HOH HOH . E 4 HOH A 144 744 31 HOH HOH . E 4 HOH A 145 745 193 HOH HOH . E 4 HOH A 146 746 102 HOH HOH . E 4 HOH A 147 747 61 HOH HOH . E 4 HOH A 148 748 49 HOH HOH . E 4 HOH A 149 749 28 HOH HOH . E 4 HOH A 150 750 101 HOH HOH . E 4 HOH A 151 751 221 HOH HOH . E 4 HOH A 152 752 284 HOH HOH . E 4 HOH A 153 753 110 HOH HOH . E 4 HOH A 154 754 236 HOH HOH . E 4 HOH A 155 755 54 HOH HOH . E 4 HOH A 156 756 105 HOH HOH . E 4 HOH A 157 757 44 HOH HOH . E 4 HOH A 158 758 71 HOH HOH . E 4 HOH A 159 759 84 HOH HOH . E 4 HOH A 160 760 231 HOH HOH . E 4 HOH A 161 761 85 HOH HOH . E 4 HOH A 162 762 55 HOH HOH . E 4 HOH A 163 763 30 HOH HOH . E 4 HOH A 164 764 116 HOH HOH . E 4 HOH A 165 765 11 HOH HOH . E 4 HOH A 166 766 211 HOH HOH . E 4 HOH A 167 767 19 HOH HOH . E 4 HOH A 168 768 86 HOH HOH . E 4 HOH A 169 769 157 HOH HOH . E 4 HOH A 170 770 129 HOH HOH . E 4 HOH A 171 771 10 HOH HOH . E 4 HOH A 172 772 32 HOH HOH . E 4 HOH A 173 773 191 HOH HOH . E 4 HOH A 174 774 122 HOH HOH . E 4 HOH A 175 775 215 HOH HOH . E 4 HOH A 176 776 76 HOH HOH . E 4 HOH A 177 777 111 HOH HOH . E 4 HOH A 178 778 235 HOH HOH . E 4 HOH A 179 779 169 HOH HOH . E 4 HOH A 180 780 186 HOH HOH . E 4 HOH A 181 781 208 HOH HOH . E 4 HOH A 182 782 27 HOH HOH . E 4 HOH A 183 783 99 HOH HOH . E 4 HOH A 184 784 326 HOH HOH . E 4 HOH A 185 785 205 HOH HOH . E 4 HOH A 186 786 160 HOH HOH . E 4 HOH A 187 787 308 HOH HOH . E 4 HOH A 188 788 212 HOH HOH . E 4 HOH A 189 789 114 HOH HOH . E 4 HOH A 190 790 245 HOH HOH . E 4 HOH A 191 791 209 HOH HOH . E 4 HOH A 192 792 269 HOH HOH . E 4 HOH A 193 793 303 HOH HOH . E 4 HOH A 194 794 184 HOH HOH . E 4 HOH A 195 795 286 HOH HOH . E 4 HOH A 196 796 43 HOH HOH . E 4 HOH A 197 797 328 HOH HOH . E 4 HOH A 198 798 143 HOH HOH . E 4 HOH A 199 799 154 HOH HOH . E 4 HOH A 200 800 82 HOH HOH . E 4 HOH A 201 801 182 HOH HOH . E 4 HOH A 202 802 162 HOH HOH . E 4 HOH A 203 803 292 HOH HOH . E 4 HOH A 204 804 273 HOH HOH . E 4 HOH A 205 805 92 HOH HOH . E 4 HOH A 206 806 95 HOH HOH . E 4 HOH A 207 807 147 HOH HOH . E 4 HOH A 208 808 152 HOH HOH . E 4 HOH A 209 809 173 HOH HOH . E 4 HOH A 210 810 243 HOH HOH . E 4 HOH A 211 811 163 HOH HOH . E 4 HOH A 212 812 200 HOH HOH . E 4 HOH A 213 813 188 HOH HOH . E 4 HOH A 214 814 300 HOH HOH . E 4 HOH A 215 815 123 HOH HOH . E 4 HOH A 216 816 268 HOH HOH . E 4 HOH A 217 817 137 HOH HOH . E 4 HOH A 218 818 322 HOH HOH . E 4 HOH A 219 819 174 HOH HOH . E 4 HOH A 220 820 301 HOH HOH . E 4 HOH A 221 821 307 HOH HOH . E 4 HOH A 222 822 266 HOH HOH . E 4 HOH A 223 823 291 HOH HOH . E 4 HOH A 224 824 127 HOH HOH . E 4 HOH A 225 825 246 HOH HOH . E 4 HOH A 226 826 51 HOH HOH . E 4 HOH A 227 827 280 HOH HOH . E 4 HOH A 228 828 267 HOH HOH . E 4 HOH A 229 829 272 HOH HOH . E 4 HOH A 230 830 274 HOH HOH . E 4 HOH A 231 831 309 HOH HOH . E 4 HOH A 232 832 242 HOH HOH . E 4 HOH A 233 833 190 HOH HOH . E 4 HOH A 234 834 282 HOH HOH . E 4 HOH A 235 835 264 HOH HOH . E 4 HOH A 236 836 265 HOH HOH . E 4 HOH A 237 837 279 HOH HOH . E 4 HOH A 238 838 281 HOH HOH . E 4 HOH A 239 839 73 HOH HOH . E 4 HOH A 240 840 285 HOH HOH . E 4 HOH A 241 841 316 HOH HOH . E 4 HOH A 242 842 74 HOH HOH . E 4 HOH A 243 843 120 HOH HOH . E 4 HOH A 244 844 151 HOH HOH . E 4 HOH A 245 845 117 HOH HOH . E 4 HOH A 246 846 278 HOH HOH . E 4 HOH A 247 847 323 HOH HOH . E 4 HOH A 248 848 275 HOH HOH . E 4 HOH A 249 849 290 HOH HOH . E 4 HOH A 250 850 276 HOH HOH . E 4 HOH A 251 851 139 HOH HOH . E 4 HOH A 252 852 180 HOH HOH . E 4 HOH A 253 853 317 HOH HOH . E 4 HOH A 254 854 271 HOH HOH . E 4 HOH A 255 855 103 HOH HOH . E 4 HOH A 256 856 178 HOH HOH . E 4 HOH A 257 857 176 HOH HOH . E 4 HOH A 258 858 302 HOH HOH . E 4 HOH A 259 859 175 HOH HOH . E 4 HOH A 260 860 296 HOH HOH . E 4 HOH A 261 861 201 HOH HOH . E 4 HOH A 262 862 91 HOH HOH . E 4 HOH A 263 863 159 HOH HOH . E 4 HOH A 264 864 125 HOH HOH . E 4 HOH A 265 865 67 HOH HOH . E 4 HOH A 266 866 153 HOH HOH . E 4 HOH A 267 867 170 HOH HOH . E 4 HOH A 268 868 312 HOH HOH . E 4 HOH A 269 869 288 HOH HOH . E 4 HOH A 270 870 177 HOH HOH . E 4 HOH A 271 871 310 HOH HOH . E 4 HOH A 272 872 181 HOH HOH . E 4 HOH A 273 873 107 HOH HOH . E 4 HOH A 274 874 187 HOH HOH . E 4 HOH A 275 875 313 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 -11.46 -15.961 -26.22 1 39.76 ? C1 GOL 503 A 1 HETATM 2 O O1 GOL . . . D 3 -12.264 -15.184 -25.357 1 35.13 ? O1 GOL 503 A 1 HETATM 3 C C2 GOL . . . D 3 -11.686 -17.439 -25.917 1 39.01 ? C2 GOL 503 A 1 HETATM 4 O O2 GOL . . . D 3 -11.973 -18.185 -27.074 1 46.28 ? O2 GOL 503 A 1 HETATM 5 C C3 GOL . . . D 3 -10.451 -18.015 -25.255 1 41.59 ? C3 GOL 503 A 1 HETATM 6 O O3 GOL . . . D 3 -10.802 -18.378 -23.943 1 37.69 ? O3 GOL 503 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #