data_6I6C
#
_model_server_result.job_id            U64U1pIp_dR67fElbYhZ8g 
_model_server_result.datetime_utc      '2024-11-24 21:46:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6i6c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":304}' 
#
_entry.id    6I6C 
#
_exptl.entry_id    6I6C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6I6C 
_cell.length_a            113.913 
_cell.length_b            77.321 
_cell.length_c            59.214 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6I6C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6I6C 
_atom_sites.fract_transf_matrix[1][1]    0.008779 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012933 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016888 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 301 301 NAP NAP . 
D 3 H4H A 1 302 1 H4H INX . 
E 4 EDO A 1 303 1 EDO EDO . 
F 4 EDO A 1 304 3 EDO EDO . 
G 4 EDO A 1 305 5 EDO EDO . 
H 2 NAP B 1 301 301 NAP NAP . 
I 3 H4H B 1 302 2 H4H INX . 
J 4 EDO B 1 303 2 EDO EDO . 
K 4 EDO B 1 304 4 EDO EDO . 
L 4 EDO B 1 305 6 EDO EDO . 
M 4 EDO B 1 306 7 EDO EDO . 
N 5 HOH A 1 401 238 HOH HOH . 
N 5 HOH A 2 402 106 HOH HOH . 
N 5 HOH A 3 403 32 HOH HOH . 
N 5 HOH A 4 404 166 HOH HOH . 
N 5 HOH A 5 405 89 HOH HOH . 
N 5 HOH A 6 406 68 HOH HOH . 
N 5 HOH A 7 407 35 HOH HOH . 
N 5 HOH A 8 408 131 HOH HOH . 
N 5 HOH A 9 409 272 HOH HOH . 
N 5 HOH A 10 410 55 HOH HOH . 
N 5 HOH A 11 411 90 HOH HOH . 
N 5 HOH A 12 412 171 HOH HOH . 
N 5 HOH A 13 413 72 HOH HOH . 
N 5 HOH A 14 414 163 HOH HOH . 
N 5 HOH A 15 415 266 HOH HOH . 
N 5 HOH A 16 416 83 HOH HOH . 
N 5 HOH A 17 417 169 HOH HOH . 
N 5 HOH A 18 418 260 HOH HOH . 
N 5 HOH A 19 419 45 HOH HOH . 
N 5 HOH A 20 420 64 HOH HOH . 
N 5 HOH A 21 421 144 HOH HOH . 
N 5 HOH A 22 422 192 HOH HOH . 
N 5 HOH A 23 423 49 HOH HOH . 
N 5 HOH A 24 424 165 HOH HOH . 
N 5 HOH A 25 425 74 HOH HOH . 
N 5 HOH A 26 426 249 HOH HOH . 
N 5 HOH A 27 427 232 HOH HOH . 
N 5 HOH A 28 428 226 HOH HOH . 
N 5 HOH A 29 429 235 HOH HOH . 
N 5 HOH A 30 430 94 HOH HOH . 
N 5 HOH A 31 431 1 HOH HOH . 
N 5 HOH A 32 432 162 HOH HOH . 
N 5 HOH A 33 433 122 HOH HOH . 
N 5 HOH A 34 434 96 HOH HOH . 
N 5 HOH A 35 435 103 HOH HOH . 
N 5 HOH A 36 436 199 HOH HOH . 
N 5 HOH A 37 437 57 HOH HOH . 
N 5 HOH A 38 438 180 HOH HOH . 
N 5 HOH A 39 439 267 HOH HOH . 
N 5 HOH A 40 440 140 HOH HOH . 
N 5 HOH A 41 441 93 HOH HOH . 
N 5 HOH A 42 442 73 HOH HOH . 
N 5 HOH A 43 443 239 HOH HOH . 
N 5 HOH A 44 444 120 HOH HOH . 
N 5 HOH A 45 445 189 HOH HOH . 
N 5 HOH A 46 446 246 HOH HOH . 
N 5 HOH A 47 447 248 HOH HOH . 
N 5 HOH A 48 448 2 HOH HOH . 
N 5 HOH A 49 449 147 HOH HOH . 
N 5 HOH A 50 450 139 HOH HOH . 
N 5 HOH A 51 451 9 HOH HOH . 
N 5 HOH A 52 452 138 HOH HOH . 
N 5 HOH A 53 453 34 HOH HOH . 
N 5 HOH A 54 454 77 HOH HOH . 
N 5 HOH A 55 455 7 HOH HOH . 
N 5 HOH A 56 456 28 HOH HOH . 
N 5 HOH A 57 457 135 HOH HOH . 
N 5 HOH A 58 458 204 HOH HOH . 
N 5 HOH A 59 459 43 HOH HOH . 
N 5 HOH A 60 460 277 HOH HOH . 
N 5 HOH A 61 461 177 HOH HOH . 
N 5 HOH A 62 462 213 HOH HOH . 
N 5 HOH A 63 463 38 HOH HOH . 
N 5 HOH A 64 464 86 HOH HOH . 
N 5 HOH A 65 465 52 HOH HOH . 
N 5 HOH A 66 466 69 HOH HOH . 
N 5 HOH A 67 467 255 HOH HOH . 
N 5 HOH A 68 468 195 HOH HOH . 
N 5 HOH A 69 469 225 HOH HOH . 
N 5 HOH A 70 470 233 HOH HOH . 
N 5 HOH A 71 471 8 HOH HOH . 
N 5 HOH A 72 472 211 HOH HOH . 
N 5 HOH A 73 473 143 HOH HOH . 
N 5 HOH A 74 474 44 HOH HOH . 
N 5 HOH A 75 475 201 HOH HOH . 
N 5 HOH A 76 476 41 HOH HOH . 
N 5 HOH A 77 477 208 HOH HOH . 
N 5 HOH A 78 478 46 HOH HOH . 
N 5 HOH A 79 479 76 HOH HOH . 
N 5 HOH A 80 480 15 HOH HOH . 
N 5 HOH A 81 481 105 HOH HOH . 
N 5 HOH A 82 482 187 HOH HOH . 
N 5 HOH A 83 483 123 HOH HOH . 
N 5 HOH A 84 484 58 HOH HOH . 
N 5 HOH A 85 485 190 HOH HOH . 
N 5 HOH A 86 486 216 HOH HOH . 
N 5 HOH A 87 487 172 HOH HOH . 
N 5 HOH A 88 488 104 HOH HOH . 
N 5 HOH A 89 489 19 HOH HOH . 
N 5 HOH A 90 490 61 HOH HOH . 
N 5 HOH A 91 491 115 HOH HOH . 
N 5 HOH A 92 492 99 HOH HOH . 
N 5 HOH A 93 493 203 HOH HOH . 
N 5 HOH A 94 494 62 HOH HOH . 
N 5 HOH A 95 495 152 HOH HOH . 
N 5 HOH A 96 496 137 HOH HOH . 
N 5 HOH A 97 497 198 HOH HOH . 
N 5 HOH A 98 498 50 HOH HOH . 
N 5 HOH A 99 499 48 HOH HOH . 
N 5 HOH A 100 500 268 HOH HOH . 
N 5 HOH A 101 501 197 HOH HOH . 
N 5 HOH A 102 502 113 HOH HOH . 
N 5 HOH A 103 503 247 HOH HOH . 
N 5 HOH A 104 504 259 HOH HOH . 
N 5 HOH A 105 505 214 HOH HOH . 
N 5 HOH A 106 506 39 HOH HOH . 
N 5 HOH A 107 507 222 HOH HOH . 
N 5 HOH A 108 508 264 HOH HOH . 
N 5 HOH A 109 509 241 HOH HOH . 
N 5 HOH A 110 510 269 HOH HOH . 
N 5 HOH A 111 511 206 HOH HOH . 
N 5 HOH A 112 512 218 HOH HOH . 
N 5 HOH A 113 513 128 HOH HOH . 
N 5 HOH A 114 514 117 HOH HOH . 
N 5 HOH A 115 515 158 HOH HOH . 
N 5 HOH A 116 516 219 HOH HOH . 
N 5 HOH A 117 517 75 HOH HOH . 
N 5 HOH A 118 518 188 HOH HOH . 
N 5 HOH A 119 519 119 HOH HOH . 
N 5 HOH A 120 520 159 HOH HOH . 
O 5 HOH B 1 401 108 HOH HOH . 
O 5 HOH B 2 402 31 HOH HOH . 
O 5 HOH B 3 403 270 HOH HOH . 
O 5 HOH B 4 404 24 HOH HOH . 
O 5 HOH B 5 405 182 HOH HOH . 
O 5 HOH B 6 406 230 HOH HOH . 
O 5 HOH B 7 407 136 HOH HOH . 
O 5 HOH B 8 408 194 HOH HOH . 
O 5 HOH B 9 409 231 HOH HOH . 
O 5 HOH B 10 410 107 HOH HOH . 
O 5 HOH B 11 411 125 HOH HOH . 
O 5 HOH B 12 412 18 HOH HOH . 
O 5 HOH B 13 413 242 HOH HOH . 
O 5 HOH B 14 414 36 HOH HOH . 
O 5 HOH B 15 415 134 HOH HOH . 
O 5 HOH B 16 416 181 HOH HOH . 
O 5 HOH B 17 417 116 HOH HOH . 
O 5 HOH B 18 418 196 HOH HOH . 
O 5 HOH B 19 419 215 HOH HOH . 
O 5 HOH B 20 420 29 HOH HOH . 
O 5 HOH B 21 421 26 HOH HOH . 
O 5 HOH B 22 422 236 HOH HOH . 
O 5 HOH B 23 423 155 HOH HOH . 
O 5 HOH B 24 424 12 HOH HOH . 
O 5 HOH B 25 425 80 HOH HOH . 
O 5 HOH B 26 426 191 HOH HOH . 
O 5 HOH B 27 427 56 HOH HOH . 
O 5 HOH B 28 428 141 HOH HOH . 
O 5 HOH B 29 429 200 HOH HOH . 
O 5 HOH B 30 430 3 HOH HOH . 
O 5 HOH B 31 431 271 HOH HOH . 
O 5 HOH B 32 432 42 HOH HOH . 
O 5 HOH B 33 433 110 HOH HOH . 
O 5 HOH B 34 434 5 HOH HOH . 
O 5 HOH B 35 435 121 HOH HOH . 
O 5 HOH B 36 436 78 HOH HOH . 
O 5 HOH B 37 437 253 HOH HOH . 
O 5 HOH B 38 438 40 HOH HOH . 
O 5 HOH B 39 439 112 HOH HOH . 
O 5 HOH B 40 440 98 HOH HOH . 
O 5 HOH B 41 441 179 HOH HOH . 
O 5 HOH B 42 442 185 HOH HOH . 
O 5 HOH B 43 443 118 HOH HOH . 
O 5 HOH B 44 444 82 HOH HOH . 
O 5 HOH B 45 445 161 HOH HOH . 
O 5 HOH B 46 446 202 HOH HOH . 
O 5 HOH B 47 447 212 HOH HOH . 
O 5 HOH B 48 448 10 HOH HOH . 
O 5 HOH B 49 449 168 HOH HOH . 
O 5 HOH B 50 450 273 HOH HOH . 
O 5 HOH B 51 451 97 HOH HOH . 
O 5 HOH B 52 452 178 HOH HOH . 
O 5 HOH B 53 453 67 HOH HOH . 
O 5 HOH B 54 454 234 HOH HOH . 
O 5 HOH B 55 455 124 HOH HOH . 
O 5 HOH B 56 456 127 HOH HOH . 
O 5 HOH B 57 457 70 HOH HOH . 
O 5 HOH B 58 458 240 HOH HOH . 
O 5 HOH B 59 459 186 HOH HOH . 
O 5 HOH B 60 460 160 HOH HOH . 
O 5 HOH B 61 461 79 HOH HOH . 
O 5 HOH B 62 462 258 HOH HOH . 
O 5 HOH B 63 463 184 HOH HOH . 
O 5 HOH B 64 464 223 HOH HOH . 
O 5 HOH B 65 465 81 HOH HOH . 
O 5 HOH B 66 466 22 HOH HOH . 
O 5 HOH B 67 467 252 HOH HOH . 
O 5 HOH B 68 468 244 HOH HOH . 
O 5 HOH B 69 469 257 HOH HOH . 
O 5 HOH B 70 470 175 HOH HOH . 
O 5 HOH B 71 471 245 HOH HOH . 
O 5 HOH B 72 472 21 HOH HOH . 
O 5 HOH B 73 473 174 HOH HOH . 
O 5 HOH B 74 474 227 HOH HOH . 
O 5 HOH B 75 475 66 HOH HOH . 
O 5 HOH B 76 476 14 HOH HOH . 
O 5 HOH B 77 477 205 HOH HOH . 
O 5 HOH B 78 478 37 HOH HOH . 
O 5 HOH B 79 479 59 HOH HOH . 
O 5 HOH B 80 480 87 HOH HOH . 
O 5 HOH B 81 481 63 HOH HOH . 
O 5 HOH B 82 482 51 HOH HOH . 
O 5 HOH B 83 483 84 HOH HOH . 
O 5 HOH B 84 484 157 HOH HOH . 
O 5 HOH B 85 485 47 HOH HOH . 
O 5 HOH B 86 486 85 HOH HOH . 
O 5 HOH B 87 487 11 HOH HOH . 
O 5 HOH B 88 488 92 HOH HOH . 
O 5 HOH B 89 489 91 HOH HOH . 
O 5 HOH B 90 490 224 HOH HOH . 
O 5 HOH B 91 491 27 HOH HOH . 
O 5 HOH B 92 492 207 HOH HOH . 
O 5 HOH B 93 493 261 HOH HOH . 
O 5 HOH B 94 494 153 HOH HOH . 
O 5 HOH B 95 495 237 HOH HOH . 
O 5 HOH B 96 496 95 HOH HOH . 
O 5 HOH B 97 497 256 HOH HOH . 
O 5 HOH B 98 498 30 HOH HOH . 
O 5 HOH B 99 499 176 HOH HOH . 
O 5 HOH B 100 500 209 HOH HOH . 
O 5 HOH B 101 501 54 HOH HOH . 
O 5 HOH B 102 502 193 HOH HOH . 
O 5 HOH B 103 503 53 HOH HOH . 
O 5 HOH B 104 504 173 HOH HOH . 
O 5 HOH B 105 505 109 HOH HOH . 
O 5 HOH B 106 506 250 HOH HOH . 
O 5 HOH B 107 507 129 HOH HOH . 
O 5 HOH B 108 508 221 HOH HOH . 
O 5 HOH B 109 509 263 HOH HOH . 
O 5 HOH B 110 510 274 HOH HOH . 
O 5 HOH B 111 511 145 HOH HOH . 
O 5 HOH B 112 512 146 HOH HOH . 
O 5 HOH B 113 513 142 HOH HOH . 
O 5 HOH B 114 514 265 HOH HOH . 
O 5 HOH B 115 515 275 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . K 4 -3.802 21.86 -14.695 1 28.1 ? C1 EDO 304 B 1 
HETATM 2 O O1 EDO . . . K 4 -4.8 22.686 -14.064 1 25.7 ? O1 EDO 304 B 1 
HETATM 3 C C2 EDO . . . K 4 -4.432 20.558 -15.195 1 29.98 ? C2 EDO 304 B 1 
HETATM 4 O O2 EDO . . . K 4 -4.528 19.508 -14.213 1 24.1 ? O2 EDO 304 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           228 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#