data_6I6J # _model_server_result.job_id FqKWl7qMJ53Md1ZUwBLh2Q _model_server_result.datetime_utc '2024-10-19 08:32:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6I6J # _exptl.entry_id 6I6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I6J _cell.length_a 50.4 _cell.length_b 52.976 _cell.length_c 133.062 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 22 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 23 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 96 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 97 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.05 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 237 n n C10 C9 OLC doub 238 n n C10 C11 OLC sing 239 n n C9 C8 OLC sing 240 n n C17 C16 OLC sing 241 z n C11 C12 OLC sing 242 n n C8 C7 OLC sing 243 n n C24 C22 OLC sing 244 n n C24 O25 OLC sing 245 n n C16 C15 OLC sing 246 n n C12 C13 OLC sing 247 n n C7 C6 OLC sing 248 n n C15 C14 OLC sing 249 n n C13 C14 OLC sing 250 n n C6 C5 OLC sing 251 n n C5 C4 OLC sing 252 n n C4 C3 OLC sing 253 n n C3 C2 OLC sing 254 n n C2 C1 OLC sing 255 n n C21 C22 OLC sing 256 n n C21 O20 OLC sing 257 n n C1 O19 OLC doub 258 n n C1 O20 OLC sing 259 n n C22 O23 OLC sing 260 n n C18 H18 OLC sing 261 n n C18 H18A OLC sing 262 n n C18 H18B OLC sing 263 n n C10 H10 OLC sing 264 n n C9 H9 OLC sing 265 n n C17 H17 OLC sing 266 n n C17 H17A OLC sing 267 n n C11 H11 OLC sing 268 n n C11 H11A OLC sing 269 n n C8 H8 OLC sing 270 n n C8 H8A OLC sing 271 n n C24 H24 OLC sing 272 n n C24 H24A OLC sing 273 n n C16 H16 OLC sing 274 n n C16 H16A OLC sing 275 n n C12 H12 OLC sing 276 n n C12 H12A OLC sing 277 n n C7 H7 OLC sing 278 n n C7 H7A OLC sing 279 n n C15 H15 OLC sing 280 n n C15 H15A OLC sing 281 n n C13 H13 OLC sing 282 n n C13 H13A OLC sing 283 n n C6 H6 OLC sing 284 n n C6 H6A OLC sing 285 n n C14 H14 OLC sing 286 n n C14 H14A OLC sing 287 n n C5 H5 OLC sing 288 n n C5 H5A OLC sing 289 n n C4 H4 OLC sing 290 n n C4 H4A OLC sing 291 n n C3 H3 OLC sing 292 n n C3 H3A OLC sing 293 n n C2 H2 OLC sing 294 n n C2 H2A OLC sing 295 n n C21 H21 OLC sing 296 n n C21 H21A OLC sing 297 n n C22 H22 OLC sing 298 n n O25 HO25 OLC sing 299 n n O23 HO23 OLC sing 300 n n # _atom_sites.entry_id 6I6J _atom_sites.fract_transf_matrix[1][1] 0.019841 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018877 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 OLC A 1 401 401 OLC OLC . D 3 OLC C 1 201 201 OLC OLC . E 4 HOH A 1 501 74 HOH HOH . E 4 HOH A 2 502 7 HOH HOH . E 4 HOH A 3 503 38 HOH HOH . E 4 HOH A 4 504 2 HOH HOH . E 4 HOH A 5 505 66 HOH HOH . E 4 HOH A 6 506 76 HOH HOH . E 4 HOH A 7 507 18 HOH HOH . E 4 HOH A 8 508 1 HOH HOH . E 4 HOH A 9 509 12 HOH HOH . E 4 HOH A 10 510 16 HOH HOH . E 4 HOH A 11 511 33 HOH HOH . E 4 HOH A 12 512 78 HOH HOH . E 4 HOH A 13 513 24 HOH HOH . E 4 HOH A 14 514 34 HOH HOH . E 4 HOH A 15 515 3 HOH HOH . E 4 HOH A 16 516 30 HOH HOH . E 4 HOH A 17 517 21 HOH HOH . E 4 HOH A 18 518 17 HOH HOH . E 4 HOH A 19 519 75 HOH HOH . E 4 HOH A 20 520 28 HOH HOH . E 4 HOH A 21 521 10 HOH HOH . E 4 HOH A 22 522 48 HOH HOH . E 4 HOH A 23 523 36 HOH HOH . E 4 HOH A 24 524 49 HOH HOH . E 4 HOH A 25 525 6 HOH HOH . E 4 HOH A 26 526 50 HOH HOH . E 4 HOH A 27 527 19 HOH HOH . E 4 HOH A 28 528 8 HOH HOH . E 4 HOH A 29 529 45 HOH HOH . E 4 HOH A 30 530 23 HOH HOH . E 4 HOH A 31 531 54 HOH HOH . E 4 HOH A 32 532 22 HOH HOH . E 4 HOH A 33 533 68 HOH HOH . E 4 HOH A 34 534 25 HOH HOH . E 4 HOH A 35 535 52 HOH HOH . E 4 HOH A 36 536 44 HOH HOH . E 4 HOH A 37 537 61 HOH HOH . E 4 HOH A 38 538 62 HOH HOH . E 4 HOH A 39 539 77 HOH HOH . E 4 HOH A 40 540 55 HOH HOH . E 4 HOH A 41 541 69 HOH HOH . E 4 HOH A 42 542 43 HOH HOH . E 4 HOH A 43 543 60 HOH HOH . E 4 HOH A 44 544 15 HOH HOH . E 4 HOH A 45 545 31 HOH HOH . E 4 HOH A 46 546 59 HOH HOH . E 4 HOH A 47 547 67 HOH HOH . E 4 HOH A 48 548 64 HOH HOH . E 4 HOH A 49 549 41 HOH HOH . E 4 HOH A 50 550 42 HOH HOH . E 4 HOH A 51 551 70 HOH HOH . E 4 HOH A 52 552 35 HOH HOH . F 4 HOH C 1 301 63 HOH HOH . F 4 HOH C 2 302 27 HOH HOH . F 4 HOH C 3 303 20 HOH HOH . F 4 HOH C 4 304 37 HOH HOH . F 4 HOH C 5 305 46 HOH HOH . F 4 HOH C 6 306 13 HOH HOH . F 4 HOH C 7 307 51 HOH HOH . F 4 HOH C 8 308 29 HOH HOH . F 4 HOH C 9 309 9 HOH HOH . F 4 HOH C 10 310 14 HOH HOH . F 4 HOH C 11 311 5 HOH HOH . F 4 HOH C 12 312 40 HOH HOH . F 4 HOH C 13 313 53 HOH HOH . F 4 HOH C 14 314 26 HOH HOH . F 4 HOH C 15 315 32 HOH HOH . F 4 HOH C 16 316 72 HOH HOH . F 4 HOH C 17 317 4 HOH HOH . F 4 HOH C 18 318 58 HOH HOH . F 4 HOH C 19 319 47 HOH HOH . F 4 HOH C 20 320 65 HOH HOH . F 4 HOH C 21 321 73 HOH HOH . F 4 HOH C 22 322 11 HOH HOH . F 4 HOH C 23 323 56 HOH HOH . F 4 HOH C 24 324 39 HOH HOH . F 4 HOH C 25 325 79 HOH HOH . F 4 HOH C 26 326 57 HOH HOH . F 4 HOH C 27 327 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . C 3 2.076 0.109 -3.216 1 71.62 ? C18 OLC 401 A 1 HETATM 2 C C10 OLC . . . C 3 -0.757 5.25 3.502 1 52.96 ? C10 OLC 401 A 1 HETATM 3 C C9 OLC . . . C 3 -0.747 5.643 4.782 1 55.24 ? C9 OLC 401 A 1 HETATM 4 C C17 OLC . . . C 3 1.49 0.251 -1.811 1 70.3 ? C17 OLC 401 A 1 HETATM 5 C C11 OLC . . . C 3 -1.987 5.216 2.653 1 52.5 ? C11 OLC 401 A 1 HETATM 6 C C8 OLC . . . C 3 0.472 5.681 5.643 1 53.22 ? C8 OLC 401 A 1 HETATM 7 C C24 OLC . . . C 3 2.038 3.864 17.436 1 108.73 ? C24 OLC 401 A 1 HETATM 8 C C16 OLC . . . C 3 0.547 1.455 -1.751 1 67.3 ? C16 OLC 401 A 1 HETATM 9 C C12 OLC . . . C 3 -1.652 4.806 1.217 1 48.58 ? C12 OLC 401 A 1 HETATM 10 C C7 OLC . . . C 3 0.057 5.919 7.094 1 57.59 ? C7 OLC 401 A 1 HETATM 11 C C15 OLC . . . C 3 0.037 1.682 -0.322 1 61.19 ? C15 OLC 401 A 1 HETATM 12 C C13 OLC . . . C 3 -1.164 3.349 1.159 1 43.46 ? C13 OLC 401 A 1 HETATM 13 C C6 OLC . . . C 3 0.184 7.393 7.474 1 59.49 ? C6 OLC 401 A 1 HETATM 14 C C14 OLC . . . C 3 -0.703 3.023 -0.259 1 52.56 ? C14 OLC 401 A 1 HETATM 15 C C5 OLC . . . C 3 -0.224 7.572 8.937 1 58.03 ? C5 OLC 401 A 1 HETATM 16 C C4 OLC . . . C 3 0.614 6.679 9.849 1 59.28 ? C4 OLC 401 A 1 HETATM 17 C C3 OLC . . . C 3 0.154 6.842 11.305 1 64.49 ? C3 OLC 401 A 1 HETATM 18 C C2 OLC . . . C 3 0.819 5.775 12.172 1 70.36 ? C2 OLC 401 A 1 HETATM 19 C C21 OLC . . . C 3 0.444 4.71 15.681 1 100.09 ? C21 OLC 401 A 1 HETATM 20 C C1 OLC . . . C 3 0.407 5.899 13.612 1 88.18 ? C1 OLC 401 A 1 HETATM 21 C C22 OLC . . . C 3 1.244 3.465 16.159 1 107.71 ? C22 OLC 401 A 1 HETATM 22 O O19 OLC . . . C 3 -0.152 6.826 14.175 1 99.79 ? O19 OLC 401 A 1 HETATM 23 O O25 OLC . . . C 3 2.773 2.719 17.764 1 109.72 ? O25 OLC 401 A 1 HETATM 24 O O23 OLC . . . C 3 0.403 2.39 16.388 1 113.28 ? O23 OLC 401 A 1 HETATM 25 O O20 OLC . . . C 3 0.746 4.774 14.302 1 93.72 ? O20 OLC 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #