data_6I6T # _model_server_result.job_id 7UY4LtmdagTlm3Mki4Qc9w _model_server_result.datetime_utc '2024-11-24 22:58:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i6t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6I6T # _exptl.entry_id 6I6T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 267.075 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-bromanyl-1-oxidanyl-naphthalene-2-carboxylic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I6T _cell.length_a 108.115 _cell.length_b 83.925 _cell.length_c 59.098 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I6T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'C11 H7 Br O3' _chem_comp.formula_weight 267.075 _chem_comp.id H5B _chem_comp.mon_nstd_flag . _chem_comp.name '4-bromanyl-1-oxidanyl-naphthalene-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C2 H5B doub 138 n n O15 C14 H5B sing 139 n n C2 O1 H5B sing 140 n n C2 C4 H5B sing 141 n n C14 C4 H5B doub 142 n y C14 C13 H5B sing 143 n y C4 C5 H5B sing 144 n y C12 C13 H5B doub 145 n y C12 C11 H5B sing 146 n y C13 C8 H5B sing 147 n y C5 C6 H5B doub 148 n y C11 C10 H5B doub 149 n y C8 C6 H5B sing 150 n y C8 C9 H5B doub 151 n y C6 BR7 H5B sing 152 n n C10 C9 H5B sing 153 n y C5 H1 H5B sing 154 n n C11 H2 H5B sing 155 n n C12 H3 H5B sing 156 n n O1 H4 H5B sing 157 n n C9 H5 H5B sing 158 n n C10 H6 H5B sing 159 n n O15 H7 H5B sing 160 n n # _atom_sites.entry_id 6I6T _atom_sites.fract_transf_matrix[1][1] 0.009249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016921 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 301 301 NAP NAP . D 3 H5B A 1 302 1 H5B INX . E 3 H5B A 1 303 4 H5B INX . F 4 EDO A 1 304 2 EDO EDO . G 2 NAP B 1 301 301 NAP NAP . H 3 H5B B 1 302 2 H5B INX . I 3 H5B B 1 303 3 H5B INX . J 4 EDO B 1 304 3 EDO EDO . K 5 HOH A 1 401 249 HOH HOH . K 5 HOH A 2 402 293 HOH HOH . K 5 HOH A 3 403 6 HOH HOH . K 5 HOH A 4 404 252 HOH HOH . K 5 HOH A 5 405 148 HOH HOH . K 5 HOH A 6 406 115 HOH HOH . K 5 HOH A 7 407 113 HOH HOH . K 5 HOH A 8 408 254 HOH HOH . K 5 HOH A 9 409 85 HOH HOH . K 5 HOH A 10 410 80 HOH HOH . K 5 HOH A 11 411 270 HOH HOH . K 5 HOH A 12 412 290 HOH HOH . K 5 HOH A 13 413 2 HOH HOH . K 5 HOH A 14 414 127 HOH HOH . K 5 HOH A 15 415 70 HOH HOH . K 5 HOH A 16 416 11 HOH HOH . K 5 HOH A 17 417 94 HOH HOH . K 5 HOH A 18 418 157 HOH HOH . K 5 HOH A 19 419 59 HOH HOH . K 5 HOH A 20 420 149 HOH HOH . K 5 HOH A 21 421 26 HOH HOH . K 5 HOH A 22 422 226 HOH HOH . K 5 HOH A 23 423 78 HOH HOH . K 5 HOH A 24 424 17 HOH HOH . K 5 HOH A 25 425 12 HOH HOH . K 5 HOH A 26 426 87 HOH HOH . K 5 HOH A 27 427 163 HOH HOH . K 5 HOH A 28 428 14 HOH HOH . K 5 HOH A 29 429 151 HOH HOH . K 5 HOH A 30 430 51 HOH HOH . K 5 HOH A 31 431 278 HOH HOH . K 5 HOH A 32 432 73 HOH HOH . K 5 HOH A 33 433 156 HOH HOH . K 5 HOH A 34 434 68 HOH HOH . K 5 HOH A 35 435 50 HOH HOH . K 5 HOH A 36 436 121 HOH HOH . K 5 HOH A 37 437 162 HOH HOH . K 5 HOH A 38 438 139 HOH HOH . K 5 HOH A 39 439 269 HOH HOH . K 5 HOH A 40 440 22 HOH HOH . K 5 HOH A 41 441 256 HOH HOH . K 5 HOH A 42 442 95 HOH HOH . K 5 HOH A 43 443 131 HOH HOH . K 5 HOH A 44 444 158 HOH HOH . K 5 HOH A 45 445 180 HOH HOH . K 5 HOH A 46 446 82 HOH HOH . K 5 HOH A 47 447 152 HOH HOH . K 5 HOH A 48 448 219 HOH HOH . K 5 HOH A 49 449 97 HOH HOH . K 5 HOH A 50 450 57 HOH HOH . K 5 HOH A 51 451 276 HOH HOH . K 5 HOH A 52 452 186 HOH HOH . K 5 HOH A 53 453 18 HOH HOH . K 5 HOH A 54 454 13 HOH HOH . K 5 HOH A 55 455 142 HOH HOH . K 5 HOH A 56 456 277 HOH HOH . K 5 HOH A 57 457 294 HOH HOH . K 5 HOH A 58 458 7 HOH HOH . K 5 HOH A 59 459 4 HOH HOH . K 5 HOH A 60 460 170 HOH HOH . K 5 HOH A 61 461 101 HOH HOH . K 5 HOH A 62 462 173 HOH HOH . K 5 HOH A 63 463 60 HOH HOH . K 5 HOH A 64 464 107 HOH HOH . K 5 HOH A 65 465 289 HOH HOH . K 5 HOH A 66 466 34 HOH HOH . K 5 HOH A 67 467 132 HOH HOH . K 5 HOH A 68 468 110 HOH HOH . K 5 HOH A 69 469 75 HOH HOH . K 5 HOH A 70 470 272 HOH HOH . K 5 HOH A 71 471 64 HOH HOH . K 5 HOH A 72 472 231 HOH HOH . K 5 HOH A 73 473 111 HOH HOH . K 5 HOH A 74 474 8 HOH HOH . K 5 HOH A 75 475 48 HOH HOH . K 5 HOH A 76 476 63 HOH HOH . K 5 HOH A 77 477 53 HOH HOH . K 5 HOH A 78 478 250 HOH HOH . K 5 HOH A 79 479 257 HOH HOH . K 5 HOH A 80 480 251 HOH HOH . K 5 HOH A 81 481 43 HOH HOH . K 5 HOH A 82 482 292 HOH HOH . K 5 HOH A 83 483 259 HOH HOH . K 5 HOH A 84 484 54 HOH HOH . K 5 HOH A 85 485 52 HOH HOH . K 5 HOH A 86 486 114 HOH HOH . K 5 HOH A 87 487 274 HOH HOH . K 5 HOH A 88 488 267 HOH HOH . K 5 HOH A 89 489 164 HOH HOH . K 5 HOH A 90 490 273 HOH HOH . K 5 HOH A 91 491 225 HOH HOH . K 5 HOH A 92 492 118 HOH HOH . K 5 HOH A 93 493 261 HOH HOH . K 5 HOH A 94 494 268 HOH HOH . L 5 HOH B 1 401 124 HOH HOH . L 5 HOH B 2 402 19 HOH HOH . L 5 HOH B 3 403 136 HOH HOH . L 5 HOH B 4 404 24 HOH HOH . L 5 HOH B 5 405 77 HOH HOH . L 5 HOH B 6 406 41 HOH HOH . L 5 HOH B 7 407 93 HOH HOH . L 5 HOH B 8 408 129 HOH HOH . L 5 HOH B 9 409 253 HOH HOH . L 5 HOH B 10 410 298 HOH HOH . L 5 HOH B 11 411 260 HOH HOH . L 5 HOH B 12 412 258 HOH HOH . L 5 HOH B 13 413 27 HOH HOH . L 5 HOH B 14 414 29 HOH HOH . L 5 HOH B 15 415 172 HOH HOH . L 5 HOH B 16 416 175 HOH HOH . L 5 HOH B 17 417 39 HOH HOH . L 5 HOH B 18 418 123 HOH HOH . L 5 HOH B 19 419 33 HOH HOH . L 5 HOH B 20 420 1 HOH HOH . L 5 HOH B 21 421 69 HOH HOH . L 5 HOH B 22 422 61 HOH HOH . L 5 HOH B 23 423 5 HOH HOH . L 5 HOH B 24 424 71 HOH HOH . L 5 HOH B 25 425 234 HOH HOH . L 5 HOH B 26 426 30 HOH HOH . L 5 HOH B 27 427 189 HOH HOH . L 5 HOH B 28 428 126 HOH HOH . L 5 HOH B 29 429 105 HOH HOH . L 5 HOH B 30 430 134 HOH HOH . L 5 HOH B 31 431 297 HOH HOH . L 5 HOH B 32 432 58 HOH HOH . L 5 HOH B 33 433 16 HOH HOH . L 5 HOH B 34 434 106 HOH HOH . L 5 HOH B 35 435 264 HOH HOH . L 5 HOH B 36 436 96 HOH HOH . L 5 HOH B 37 437 271 HOH HOH . L 5 HOH B 38 438 92 HOH HOH . L 5 HOH B 39 439 282 HOH HOH . L 5 HOH B 40 440 193 HOH HOH . L 5 HOH B 41 441 98 HOH HOH . L 5 HOH B 42 442 9 HOH HOH . L 5 HOH B 43 443 145 HOH HOH . L 5 HOH B 44 444 275 HOH HOH . L 5 HOH B 45 445 10 HOH HOH . L 5 HOH B 46 446 45 HOH HOH . L 5 HOH B 47 447 138 HOH HOH . L 5 HOH B 48 448 25 HOH HOH . L 5 HOH B 49 449 76 HOH HOH . L 5 HOH B 50 450 15 HOH HOH . L 5 HOH B 51 451 89 HOH HOH . L 5 HOH B 52 452 102 HOH HOH . L 5 HOH B 53 453 104 HOH HOH . L 5 HOH B 54 454 40 HOH HOH . L 5 HOH B 55 455 55 HOH HOH . L 5 HOH B 56 456 233 HOH HOH . L 5 HOH B 57 457 47 HOH HOH . L 5 HOH B 58 458 283 HOH HOH . L 5 HOH B 59 459 153 HOH HOH . L 5 HOH B 60 460 56 HOH HOH . L 5 HOH B 61 461 3 HOH HOH . L 5 HOH B 62 462 79 HOH HOH . L 5 HOH B 63 463 159 HOH HOH . L 5 HOH B 64 464 81 HOH HOH . L 5 HOH B 65 465 67 HOH HOH . L 5 HOH B 66 466 37 HOH HOH . L 5 HOH B 67 467 65 HOH HOH . L 5 HOH B 68 468 295 HOH HOH . L 5 HOH B 69 469 284 HOH HOH . L 5 HOH B 70 470 204 HOH HOH . L 5 HOH B 71 471 23 HOH HOH . L 5 HOH B 72 472 108 HOH HOH . L 5 HOH B 73 473 49 HOH HOH . L 5 HOH B 74 474 109 HOH HOH . L 5 HOH B 75 475 38 HOH HOH . L 5 HOH B 76 476 91 HOH HOH . L 5 HOH B 77 477 232 HOH HOH . L 5 HOH B 78 478 28 HOH HOH . L 5 HOH B 79 479 62 HOH HOH . L 5 HOH B 80 480 230 HOH HOH . L 5 HOH B 81 481 100 HOH HOH . L 5 HOH B 82 482 168 HOH HOH . L 5 HOH B 83 483 141 HOH HOH . L 5 HOH B 84 484 206 HOH HOH . L 5 HOH B 85 485 35 HOH HOH . L 5 HOH B 86 486 72 HOH HOH . L 5 HOH B 87 487 198 HOH HOH . L 5 HOH B 88 488 248 HOH HOH . L 5 HOH B 89 489 183 HOH HOH . L 5 HOH B 90 490 120 HOH HOH . L 5 HOH B 91 491 279 HOH HOH . L 5 HOH B 92 492 266 HOH HOH . L 5 HOH B 93 493 263 HOH HOH . L 5 HOH B 94 494 165 HOH HOH . L 5 HOH B 95 495 262 HOH HOH . L 5 HOH B 96 496 90 HOH HOH . L 5 HOH B 97 497 119 HOH HOH . L 5 HOH B 98 498 86 HOH HOH . L 5 HOH B 99 499 216 HOH HOH . L 5 HOH B 100 500 154 HOH HOH . L 5 HOH B 101 501 238 HOH HOH . L 5 HOH B 102 502 116 HOH HOH . L 5 HOH B 103 503 291 HOH HOH . L 5 HOH B 104 504 117 HOH HOH . L 5 HOH B 105 505 265 HOH HOH . L 5 HOH B 106 506 286 HOH HOH . L 5 HOH B 107 507 146 HOH HOH . L 5 HOH B 108 508 281 HOH HOH . L 5 HOH B 109 509 280 HOH HOH . L 5 HOH B 110 510 296 HOH HOH . L 5 HOH B 111 511 285 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 H5B . . . D 3 23.226 12.189 11.225 1 37.55 ? C2 H5B 302 A 1 HETATM 2 C C4 H5B . . . D 3 24.119 12.796 12.247 1 37.48 ? C4 H5B 302 A 1 HETATM 3 C C5 H5B . . . D 3 23.554 13.362 13.429 1 34.74 ? C5 H5B 302 A 1 HETATM 4 C C6 H5B . . . D 3 24.319 13.936 14.405 1 41.6 ? C6 H5B 302 A 1 HETATM 5 C C8 H5B . . . D 3 25.738 13.995 14.27 1 42.24 ? C8 H5B 302 A 1 HETATM 6 C C11 H5B . . . D 3 28.524 14.078 13.932 1 45.15 ? C11 H5B 302 A 1 HETATM 7 C C12 H5B . . . D 3 27.763 13.492 12.951 1 48.72 ? C12 H5B 302 A 1 HETATM 8 O O1 H5B . . . D 3 22.026 12.17 11.379 1 34.92 ? O1 H5B 302 A 1 HETATM 9 O O3 H5B . . . D 3 23.712 11.653 10.087 1 44.51 ? O3 H5B 302 A 1 HETATM 10 BR BR7 H5B . . . D 3 23.393 14.639 15.901 1 46.49 ? BR7 H5B 302 A 1 HETATM 11 C C9 H5B . . . D 3 26.577 14.584 15.26 1 44.07 ? C9 H5B 302 A 1 HETATM 12 C C10 H5B . . . D 3 27.933 14.616 15.082 1 43.84 ? C10 H5B 302 A 1 HETATM 13 C C13 H5B . . . D 3 26.348 13.432 13.081 1 46.11 ? C13 H5B 302 A 1 HETATM 14 C C14 H5B . . . D 3 25.525 12.833 12.07 1 41.41 ? C14 H5B 302 A 1 HETATM 15 O O15 H5B . . . D 3 26.094 12.301 10.958 1 47.09 ? O15 H5B 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #