data_6I7E # _model_server_result.job_id JFeOtVmHegAmhmypUn31nw _model_server_result.datetime_utc '2024-11-08 15:53:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 6I7E # _exptl.entry_id 6I7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 114.939 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'VANADATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6I7E _cell.length_a 197.46 _cell.length_b 197.46 _cell.length_c 178.144 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 18 A VAL 18 1_555 A N SEP 19 A SEP 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale2 A C SEP 19 A SEP 19 1_555 A N ASN 20 A ASN 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? metalc ? metalc1 A OG1 THR 198 A THR 198 1_555 C MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc2 A OG SER 246 A SER 246 1_555 C MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc3 B O2B ADP . A ADP 801 1_555 D V VO4 . A VO4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? metalc ? metalc4 C MG MG . A MG 802 1_555 D O2 VO4 . A VO4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? # _chem_comp.formula 'O4 V -3' _chem_comp.formula_weight 114.939 _chem_comp.id VO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'VANADATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag V O1 VO4 doub 436 n n V O2 VO4 sing 437 n n V O3 VO4 sing 438 n n V O4 VO4 sing 439 n n # _atom_sites.entry_id 6I7E _atom_sites.fract_transf_matrix[1][1] 0.005064 _atom_sites.fract_transf_matrix[1][2] 0.002924 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005613 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 801 809 ADP ADP . C 3 MG A 1 802 810 MG MG . D 4 VO4 A 1 803 811 VO4 VO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 V V VO4 . . . D 4 7.023 58.939 20.645 1 145.13 ? V VO4 803 A 1 HETATM 2 O O1 VO4 . . . D 4 8.019 58.237 19.675 1 145.85 ? O1 VO4 803 A 1 HETATM 3 O O2 VO4 . . . D 4 5.569 58.58 20.212 1 144.7 ? O2 VO4 803 A 1 HETATM 4 O O3 VO4 . . . D 4 7.288 58.422 22.089 1 145.11 ? O3 VO4 803 A 1 HETATM 5 O O4 VO4 . . . D 4 7.266 60.462 20.563 1 144.98 ? O4 VO4 803 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #