data_6I7F # _model_server_result.job_id 25itBYAfXPF3hOeNC1lkig _model_server_result.datetime_utc '2024-11-29 04:58:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i7f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 6I7F # _exptl.entry_id 6I7F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.001 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,4-dichlorophenol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I7F _cell.length_a 60.94 _cell.length_b 67.15 _cell.length_c 68.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I7F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 G FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? # _chem_comp.formula 'C6 H4 Cl2 O' _chem_comp.formula_weight 163.001 _chem_comp.id 5JC _chem_comp.mon_nstd_flag . _chem_comp.name 2,4-dichlorophenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 CAI 5JC sing 1 n n OAA CAG 5JC sing 2 n n CAI CAG 5JC doub 3 n y CAI CAF 5JC sing 4 n y CAG CAD 5JC sing 5 n y CAF CAH 5JC doub 6 n y CAD CAE 5JC doub 7 n y CAH CAE 5JC sing 8 n y CAH CL2 5JC sing 9 n n CAF H1 5JC sing 10 n n CAE H2 5JC sing 11 n n CAD H3 5JC sing 12 n n OAA H4 5JC sing 13 n n # _atom_sites.entry_id 6I7F _atom_sites.fract_transf_matrix[1][1] 0.01641 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014552 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 201 201 HEM HEM . D 3 5JC A 1 202 301 5JC 5JC . E 4 SO4 A 1 203 1 SO4 SO4 . F 4 SO4 A 1 204 2 SO4 SO4 . G 2 HEM B 1 201 201 HEM HEM . H 3 5JC B 1 202 301 5JC 5JC . I 5 HOH A 1 301 109 HOH HOH . I 5 HOH A 2 302 12 HOH HOH . I 5 HOH A 3 303 33 HOH HOH . I 5 HOH A 4 304 9 HOH HOH . I 5 HOH A 5 305 96 HOH HOH . I 5 HOH A 6 306 22 HOH HOH . I 5 HOH A 7 307 71 HOH HOH . I 5 HOH A 8 308 62 HOH HOH . I 5 HOH A 9 309 1 HOH HOH . I 5 HOH A 10 310 4 HOH HOH . I 5 HOH A 11 311 37 HOH HOH . I 5 HOH A 12 312 58 HOH HOH . I 5 HOH A 13 313 34 HOH HOH . I 5 HOH A 14 314 18 HOH HOH . I 5 HOH A 15 315 69 HOH HOH . I 5 HOH A 16 316 66 HOH HOH . I 5 HOH A 17 317 32 HOH HOH . I 5 HOH A 18 318 25 HOH HOH . I 5 HOH A 19 319 6 HOH HOH . I 5 HOH A 20 320 64 HOH HOH . I 5 HOH A 21 321 92 HOH HOH . I 5 HOH A 22 322 19 HOH HOH . I 5 HOH A 23 323 36 HOH HOH . I 5 HOH A 24 324 56 HOH HOH . I 5 HOH A 25 325 8 HOH HOH . I 5 HOH A 26 326 79 HOH HOH . I 5 HOH A 27 327 85 HOH HOH . I 5 HOH A 28 328 55 HOH HOH . I 5 HOH A 29 329 63 HOH HOH . I 5 HOH A 30 330 50 HOH HOH . I 5 HOH A 31 331 93 HOH HOH . I 5 HOH A 32 332 54 HOH HOH . I 5 HOH A 33 333 83 HOH HOH . I 5 HOH A 34 334 24 HOH HOH . I 5 HOH A 35 335 20 HOH HOH . I 5 HOH A 36 336 57 HOH HOH . I 5 HOH A 37 337 11 HOH HOH . I 5 HOH A 38 338 39 HOH HOH . I 5 HOH A 39 339 78 HOH HOH . I 5 HOH A 40 340 13 HOH HOH . I 5 HOH A 41 341 17 HOH HOH . I 5 HOH A 42 342 15 HOH HOH . I 5 HOH A 43 343 68 HOH HOH . I 5 HOH A 44 344 75 HOH HOH . J 5 HOH B 1 301 65 HOH HOH . J 5 HOH B 2 302 51 HOH HOH . J 5 HOH B 3 303 2 HOH HOH . J 5 HOH B 4 304 40 HOH HOH . J 5 HOH B 5 305 90 HOH HOH . J 5 HOH B 6 306 38 HOH HOH . J 5 HOH B 7 307 14 HOH HOH . J 5 HOH B 8 308 60 HOH HOH . J 5 HOH B 9 309 16 HOH HOH . J 5 HOH B 10 310 73 HOH HOH . J 5 HOH B 11 311 7 HOH HOH . J 5 HOH B 12 312 44 HOH HOH . J 5 HOH B 13 313 29 HOH HOH . J 5 HOH B 14 314 5 HOH HOH . J 5 HOH B 15 315 30 HOH HOH . J 5 HOH B 16 316 49 HOH HOH . J 5 HOH B 17 317 27 HOH HOH . J 5 HOH B 18 318 23 HOH HOH . J 5 HOH B 19 319 47 HOH HOH . J 5 HOH B 20 320 74 HOH HOH . J 5 HOH B 21 321 43 HOH HOH . J 5 HOH B 22 322 52 HOH HOH . J 5 HOH B 23 323 28 HOH HOH . J 5 HOH B 24 324 10 HOH HOH . J 5 HOH B 25 325 26 HOH HOH . J 5 HOH B 26 326 31 HOH HOH . J 5 HOH B 27 327 77 HOH HOH . J 5 HOH B 28 328 105 HOH HOH . J 5 HOH B 29 329 82 HOH HOH . J 5 HOH B 30 330 80 HOH HOH . J 5 HOH B 31 331 46 HOH HOH . J 5 HOH B 32 332 61 HOH HOH . J 5 HOH B 33 333 53 HOH HOH . J 5 HOH B 34 334 48 HOH HOH . J 5 HOH B 35 335 59 HOH HOH . J 5 HOH B 36 336 76 HOH HOH . J 5 HOH B 37 337 21 HOH HOH . J 5 HOH B 38 338 35 HOH HOH . J 5 HOH B 39 339 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL1 5JC . . . D 3 7.892 2.081 -17.073 0.59 51.09 ? CL1 5JC 202 A 1 HETATM 2 C CAI 5JC . . . D 3 6.31 1.471 -17.171 0.59 48.15 ? CAI 5JC 202 A 1 HETATM 3 C CAF 5JC . . . D 3 5.7 1.062 -18.356 0.59 46.8 ? CAF 5JC 202 A 1 HETATM 4 C CAH 5JC . . . D 3 4.39 0.577 -18.305 0.59 47.08 ? CAH 5JC 202 A 1 HETATM 5 CL CL2 5JC . . . D 3 3.593 0.067 -19.747 0.59 42.6 ? CL2 5JC 202 A 1 HETATM 6 C CAE 5JC . . . D 3 3.714 0.497 -17.086 0.59 46.66 ? CAE 5JC 202 A 1 HETATM 7 C CAD 5JC . . . D 3 4.345 0.902 -15.913 0.59 48.55 ? CAD 5JC 202 A 1 HETATM 8 C CAG 5JC . . . D 3 5.64 1.396 -15.974 0.59 48.94 ? CAG 5JC 202 A 1 HETATM 9 O OAA 5JC . . . D 3 6.358 1.81 -14.879 0.59 50.95 ? OAA 5JC 202 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #