data_6I7I # _model_server_result.job_id 26_VnKT4BcHB4OyBb1f8wQ _model_server_result.datetime_utc '2024-11-04 23:41:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i7i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 6I7I # _exptl.entry_id 6I7I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 326.383 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I7I _cell.length_a 41.902 _cell.length_b 73.983 _cell.length_c 134.039 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I7I _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -73.983 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 265 A ASP 367 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc2 B MG MG . A MG 501 1_555 C O2A ATP . A ATP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc3 B MG MG . A MG 501 1_555 C O2B ATP . A ATP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc4 B MG MG . A MG 501 1_555 E O HOH . A HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? metalc ? metalc5 B MG MG . A MG 501 1_555 E O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc6 B MG MG . A MG 501 1_555 E O HOH . A HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? # _chem_comp.formula 'C14 H30 O8' _chem_comp.formula_weight 326.383 _chem_comp.id P33 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HEPTAETHYLENE GLYCOL;PEG330' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C21 P33 sing 286 n n O22 H22 P33 sing 287 n n C21 C20 P33 sing 288 n n C21 H211 P33 sing 289 n n C21 H212 P33 sing 290 n n C20 O19 P33 sing 291 n n C20 H201 P33 sing 292 n n C20 H202 P33 sing 293 n n O19 C18 P33 sing 294 n n C18 C17 P33 sing 295 n n C18 H181 P33 sing 296 n n C18 H182 P33 sing 297 n n C17 O16 P33 sing 298 n n C17 H171 P33 sing 299 n n C17 H172 P33 sing 300 n n O16 C15 P33 sing 301 n n C15 C14 P33 sing 302 n n C15 H151 P33 sing 303 n n C15 H152 P33 sing 304 n n C14 O13 P33 sing 305 n n C14 H141 P33 sing 306 n n C14 H142 P33 sing 307 n n O13 C12 P33 sing 308 n n C12 C11 P33 sing 309 n n C12 H121 P33 sing 310 n n C12 H122 P33 sing 311 n n C11 O10 P33 sing 312 n n C11 H111 P33 sing 313 n n C11 H112 P33 sing 314 n n O10 C9 P33 sing 315 n n C9 C8 P33 sing 316 n n C9 H91 P33 sing 317 n n C9 H92 P33 sing 318 n n C8 O7 P33 sing 319 n n C8 H81 P33 sing 320 n n C8 H82 P33 sing 321 n n O7 C6 P33 sing 322 n n C6 C5 P33 sing 323 n n C6 H61 P33 sing 324 n n C6 H62 P33 sing 325 n n C5 O4 P33 sing 326 n n C5 H51 P33 sing 327 n n C5 H52 P33 sing 328 n n O4 C3 P33 sing 329 n n C3 C2 P33 sing 330 n n C3 H31 P33 sing 331 n n C3 H32 P33 sing 332 n n C2 O1 P33 sing 333 n n C2 H21 P33 sing 334 n n C2 H22A P33 sing 335 n n O1 HO1 P33 sing 336 n n # _atom_sites.entry_id 6I7I _atom_sites.fract_transf_matrix[1][1] 0.023865 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007461 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 501 MG MG . C 3 ATP A 1 502 502 ATP ATP . D 4 P33 A 1 503 503 P33 P33 . E 5 HOH A 1 601 514 HOH HOH . E 5 HOH A 2 602 521 HOH HOH . E 5 HOH A 3 603 519 HOH HOH . E 5 HOH A 4 604 520 HOH HOH . E 5 HOH A 5 605 506 HOH HOH . E 5 HOH A 6 606 518 HOH HOH . E 5 HOH A 7 607 548 HOH HOH . E 5 HOH A 8 608 531 HOH HOH . E 5 HOH A 9 609 535 HOH HOH . E 5 HOH A 10 610 539 HOH HOH . E 5 HOH A 11 611 567 HOH HOH . E 5 HOH A 12 612 510 HOH HOH . E 5 HOH A 13 613 561 HOH HOH . E 5 HOH A 14 614 556 HOH HOH . E 5 HOH A 15 615 522 HOH HOH . E 5 HOH A 16 616 529 HOH HOH . E 5 HOH A 17 617 505 HOH HOH . E 5 HOH A 18 618 563 HOH HOH . E 5 HOH A 19 619 512 HOH HOH . E 5 HOH A 20 620 508 HOH HOH . E 5 HOH A 21 621 555 HOH HOH . E 5 HOH A 22 622 532 HOH HOH . E 5 HOH A 23 623 538 HOH HOH . E 5 HOH A 24 624 541 HOH HOH . E 5 HOH A 25 625 537 HOH HOH . E 5 HOH A 26 626 527 HOH HOH . E 5 HOH A 27 627 534 HOH HOH . E 5 HOH A 28 628 558 HOH HOH . E 5 HOH A 29 629 568 HOH HOH . E 5 HOH A 30 630 557 HOH HOH . E 5 HOH A 31 631 528 HOH HOH . E 5 HOH A 32 632 544 HOH HOH . E 5 HOH A 33 633 547 HOH HOH . E 5 HOH A 34 634 545 HOH HOH . E 5 HOH A 35 635 524 HOH HOH . E 5 HOH A 36 636 562 HOH HOH . E 5 HOH A 37 637 517 HOH HOH . E 5 HOH A 38 638 554 HOH HOH . E 5 HOH A 39 639 546 HOH HOH . E 5 HOH A 40 640 536 HOH HOH . E 5 HOH A 41 641 549 HOH HOH . E 5 HOH A 42 642 540 HOH HOH . E 5 HOH A 43 643 552 HOH HOH . E 5 HOH A 44 644 566 HOH HOH . E 5 HOH A 45 645 542 HOH HOH . E 5 HOH A 46 646 513 HOH HOH . E 5 HOH A 47 647 526 HOH HOH . E 5 HOH A 48 648 515 HOH HOH . E 5 HOH A 49 649 525 HOH HOH . E 5 HOH A 50 650 553 HOH HOH . E 5 HOH A 51 651 516 HOH HOH . E 5 HOH A 52 652 523 HOH HOH . E 5 HOH A 53 653 530 HOH HOH . E 5 HOH A 54 654 550 HOH HOH . E 5 HOH A 55 655 564 HOH HOH . E 5 HOH A 56 656 551 HOH HOH . E 5 HOH A 57 657 559 HOH HOH . E 5 HOH A 58 658 543 HOH HOH . E 5 HOH A 59 659 565 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 P33 . . . D 4 -32.954 -24.632 21.738 1 56.79 ? O22 P33 503 A 1 HETATM 2 C C21 P33 . . . D 4 -32.828 -26.046 21.564 1 56.3 ? C21 P33 503 A 1 HETATM 3 C C20 P33 . . . D 4 -31.353 -26.422 21.557 1 55.98 ? C20 P33 503 A 1 HETATM 4 O O19 P33 . . . D 4 -31.035 -27.105 22.766 1 56.51 ? O19 P33 503 A 1 HETATM 5 C C18 P33 . . . D 4 -29.639 -27.339 22.939 1 57.38 ? C18 P33 503 A 1 HETATM 6 C C17 P33 . . . D 4 -29.3 -27.275 24.423 1 57.9 ? C17 P33 503 A 1 HETATM 7 O O16 P33 . . . D 4 -29.509 -25.959 24.937 1 58.87 ? O16 P33 503 A 1 HETATM 8 C C15 P33 . . . D 4 -28.821 -25.778 26.174 1 59.97 ? C15 P33 503 A 1 HETATM 9 C C14 P33 . . . D 4 -29.183 -24.446 26.819 1 60.51 ? C14 P33 503 A 1 HETATM 10 O O13 P33 . . . D 4 -28.391 -23.395 26.261 1 61.64 ? O13 P33 503 A 1 HETATM 11 C C12 P33 . . . D 4 -28.395 -22.194 27.042 1 62 ? C12 P33 503 A 1 HETATM 12 C C11 P33 . . . D 4 -29.155 -21.084 26.326 1 62.33 ? C11 P33 503 A 1 HETATM 13 O O10 P33 . . . D 4 -30.544 -21.398 26.255 1 62.86 ? O10 P33 503 A 1 HETATM 14 C C9 P33 . . . D 4 -31.297 -20.322 25.699 1 63.65 ? C9 P33 503 A 1 HETATM 15 C C8 P33 . . . D 4 -32.735 -20.762 25.453 1 64.45 ? C8 P33 503 A 1 HETATM 16 O O7 P33 . . . D 4 -32.745 -21.973 24.688 1 65.64 ? O7 P33 503 A 1 HETATM 17 C C6 P33 . . . D 4 -33.625 -21.985 23.557 1 66.01 ? C6 P33 503 A 1 HETATM 18 C C5 P33 . . . D 4 -34.651 -23.106 23.69 1 66.09 ? C5 P33 503 A 1 HETATM 19 O O4 P33 . . . D 4 -34.018 -24.292 24.177 1 66.6 ? O4 P33 503 A 1 HETATM 20 C C3 P33 . . . D 4 -34.583 -24.79 25.392 1 66.41 ? C3 P33 503 A 1 HETATM 21 C C2 P33 . . . D 4 -33.657 -25.843 25.992 1 65.96 ? C2 P33 503 A 1 HETATM 22 O O1 P33 . . . D 4 -32.603 -25.215 26.731 1 65.6 ? O1 P33 503 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 22 #