data_6I81 # _model_server_result.job_id xrUgB6JM0gnjKQhg9PRFVQ _model_server_result.datetime_utc '2024-11-14 10:18:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i81 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6I81 # _exptl.entry_id 6I81 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I81 _cell.length_a 127.297 _cell.length_b 127.297 _cell.length_c 40.594 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I81 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6I81 _atom_sites.fract_transf_matrix[1][1] 0.007856 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007856 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024634 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MES A 1 501 1 MES MES . C 3 EDO A 1 502 1 EDO EDO . D 4 H7E A 1 503 1 H7E DRG . E 5 HOH A 1 601 44 HOH HOH . E 5 HOH A 2 602 3 HOH HOH . E 5 HOH A 3 603 123 HOH HOH . E 5 HOH A 4 604 5 HOH HOH . E 5 HOH A 5 605 102 HOH HOH . E 5 HOH A 6 606 36 HOH HOH . E 5 HOH A 7 607 81 HOH HOH . E 5 HOH A 8 608 9 HOH HOH . E 5 HOH A 9 609 32 HOH HOH . E 5 HOH A 10 610 120 HOH HOH . E 5 HOH A 11 611 7 HOH HOH . E 5 HOH A 12 612 15 HOH HOH . E 5 HOH A 13 613 114 HOH HOH . E 5 HOH A 14 614 18 HOH HOH . E 5 HOH A 15 615 110 HOH HOH . E 5 HOH A 16 616 16 HOH HOH . E 5 HOH A 17 617 118 HOH HOH . E 5 HOH A 18 618 98 HOH HOH . E 5 HOH A 19 619 54 HOH HOH . E 5 HOH A 20 620 13 HOH HOH . E 5 HOH A 21 621 2 HOH HOH . E 5 HOH A 22 622 25 HOH HOH . E 5 HOH A 23 623 23 HOH HOH . E 5 HOH A 24 624 79 HOH HOH . E 5 HOH A 25 625 17 HOH HOH . E 5 HOH A 26 626 52 HOH HOH . E 5 HOH A 27 627 82 HOH HOH . E 5 HOH A 28 628 61 HOH HOH . E 5 HOH A 29 629 1 HOH HOH . E 5 HOH A 30 630 24 HOH HOH . E 5 HOH A 31 631 117 HOH HOH . E 5 HOH A 32 632 111 HOH HOH . E 5 HOH A 33 633 116 HOH HOH . E 5 HOH A 34 634 130 HOH HOH . E 5 HOH A 35 635 26 HOH HOH . E 5 HOH A 36 636 29 HOH HOH . E 5 HOH A 37 637 70 HOH HOH . E 5 HOH A 38 638 95 HOH HOH . E 5 HOH A 39 639 93 HOH HOH . E 5 HOH A 40 640 104 HOH HOH . E 5 HOH A 41 641 14 HOH HOH . E 5 HOH A 42 642 38 HOH HOH . E 5 HOH A 43 643 37 HOH HOH . E 5 HOH A 44 644 33 HOH HOH . E 5 HOH A 45 645 12 HOH HOH . E 5 HOH A 46 646 22 HOH HOH . E 5 HOH A 47 647 8 HOH HOH . E 5 HOH A 48 648 28 HOH HOH . E 5 HOH A 49 649 21 HOH HOH . E 5 HOH A 50 650 65 HOH HOH . E 5 HOH A 51 651 43 HOH HOH . E 5 HOH A 52 652 20 HOH HOH . E 5 HOH A 53 653 132 HOH HOH . E 5 HOH A 54 654 10 HOH HOH . E 5 HOH A 55 655 27 HOH HOH . E 5 HOH A 56 656 64 HOH HOH . E 5 HOH A 57 657 84 HOH HOH . E 5 HOH A 58 658 128 HOH HOH . E 5 HOH A 59 659 41 HOH HOH . E 5 HOH A 60 660 6 HOH HOH . E 5 HOH A 61 661 131 HOH HOH . E 5 HOH A 62 662 101 HOH HOH . E 5 HOH A 63 663 99 HOH HOH . E 5 HOH A 64 664 103 HOH HOH . E 5 HOH A 65 665 34 HOH HOH . E 5 HOH A 66 666 113 HOH HOH . E 5 HOH A 67 667 78 HOH HOH . E 5 HOH A 68 668 86 HOH HOH . E 5 HOH A 69 669 83 HOH HOH . E 5 HOH A 70 670 75 HOH HOH . E 5 HOH A 71 671 126 HOH HOH . E 5 HOH A 72 672 42 HOH HOH . E 5 HOH A 73 673 85 HOH HOH . E 5 HOH A 74 674 68 HOH HOH . E 5 HOH A 75 675 67 HOH HOH . E 5 HOH A 76 676 96 HOH HOH . E 5 HOH A 77 677 122 HOH HOH . E 5 HOH A 78 678 19 HOH HOH . E 5 HOH A 79 679 129 HOH HOH . E 5 HOH A 80 680 60 HOH HOH . E 5 HOH A 81 681 112 HOH HOH . E 5 HOH A 82 682 100 HOH HOH . E 5 HOH A 83 683 73 HOH HOH . E 5 HOH A 84 684 133 HOH HOH . E 5 HOH A 85 685 66 HOH HOH . E 5 HOH A 86 686 76 HOH HOH . E 5 HOH A 87 687 119 HOH HOH . E 5 HOH A 88 688 51 HOH HOH . E 5 HOH A 89 689 121 HOH HOH . E 5 HOH A 90 690 125 HOH HOH . E 5 HOH A 91 691 109 HOH HOH . E 5 HOH A 92 692 74 HOH HOH . E 5 HOH A 93 693 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 7.146 7.703 18.17 1 31.33 ? C1 EDO 502 A 1 HETATM 2 O O1 EDO . . . C 3 6.457 8.711 18.92 1 25.97 ? O1 EDO 502 A 1 HETATM 3 C C2 EDO . . . C 3 8.545 8.189 17.801 1 33.88 ? C2 EDO 502 A 1 HETATM 4 O O2 EDO . . . C 3 9.246 8.711 18.942 1 30.66 ? O2 EDO 502 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #