data_6I8B
#
_model_server_result.job_id            ytZdYODpQfRWp80eW-m3Cw 
_model_server_result.datetime_utc      '2024-11-16 00:40:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6i8b 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
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_entry.id    6I8B 
#
_exptl.entry_id    6I8B 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6I8B 
_cell.length_a            111.875 
_cell.length_b            118.583 
_cell.length_c            43.808 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6I8B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,M 1 1 
B,I,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 K N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6I8B 
_atom_sites.fract_transf_matrix[1][1]    0.008939 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008433 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022827 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 H7T B 1 301 1 H7T LIG . 
D 3 DMS B 1 302 3 DMS DMS . 
E 3 DMS B 1 303 6 DMS DMS . 
F 3 DMS B 1 304 7 DMS DMS . 
G 3 DMS B 1 305 8 DMS DMS . 
H 4 GLY B 1 306 6 GLY GLY . 
I 5 PO4 E 1 301 2 PO4 PO4 . 
J 2 H7T E 1 302 2 H7T LIG . 
K 3 DMS E 1 303 1 DMS DMS . 
L 4 GLY E 1 304 8 GLY GLY . 
M 6 HOH B 1 401 91 HOH HOH . 
M 6 HOH B 2 402 137 HOH HOH . 
M 6 HOH B 3 403 120 HOH HOH . 
M 6 HOH B 4 404 28 HOH HOH . 
M 6 HOH B 5 405 76 HOH HOH . 
M 6 HOH B 6 406 1 HOH HOH . 
M 6 HOH B 7 407 32 HOH HOH . 
M 6 HOH B 8 408 82 HOH HOH . 
M 6 HOH B 9 409 10 HOH HOH . 
M 6 HOH B 10 410 6 HOH HOH . 
M 6 HOH B 11 411 112 HOH HOH . 
M 6 HOH B 12 412 3 HOH HOH . 
M 6 HOH B 13 413 19 HOH HOH . 
M 6 HOH B 14 414 48 HOH HOH . 
M 6 HOH B 15 415 50 HOH HOH . 
M 6 HOH B 16 416 39 HOH HOH . 
M 6 HOH B 17 417 4 HOH HOH . 
M 6 HOH B 18 418 86 HOH HOH . 
M 6 HOH B 19 419 165 HOH HOH . 
M 6 HOH B 20 420 5 HOH HOH . 
M 6 HOH B 21 421 124 HOH HOH . 
M 6 HOH B 22 422 62 HOH HOH . 
M 6 HOH B 23 423 13 HOH HOH . 
M 6 HOH B 24 424 233 HOH HOH . 
M 6 HOH B 25 425 168 HOH HOH . 
M 6 HOH B 26 426 51 HOH HOH . 
M 6 HOH B 27 427 49 HOH HOH . 
M 6 HOH B 28 428 15 HOH HOH . 
M 6 HOH B 29 429 34 HOH HOH . 
M 6 HOH B 30 430 89 HOH HOH . 
M 6 HOH B 31 431 253 HOH HOH . 
M 6 HOH B 32 432 269 HOH HOH . 
M 6 HOH B 33 433 31 HOH HOH . 
M 6 HOH B 34 434 78 HOH HOH . 
M 6 HOH B 35 435 42 HOH HOH . 
M 6 HOH B 36 436 45 HOH HOH . 
M 6 HOH B 37 437 20 HOH HOH . 
M 6 HOH B 38 438 229 HOH HOH . 
M 6 HOH B 39 439 122 HOH HOH . 
M 6 HOH B 40 440 254 HOH HOH . 
M 6 HOH B 41 441 64 HOH HOH . 
M 6 HOH B 42 442 83 HOH HOH . 
M 6 HOH B 43 443 266 HOH HOH . 
M 6 HOH B 44 444 14 HOH HOH . 
M 6 HOH B 45 445 35 HOH HOH . 
M 6 HOH B 46 446 61 HOH HOH . 
M 6 HOH B 47 447 103 HOH HOH . 
M 6 HOH B 48 448 177 HOH HOH . 
M 6 HOH B 49 449 185 HOH HOH . 
M 6 HOH B 50 450 46 HOH HOH . 
M 6 HOH B 51 451 43 HOH HOH . 
M 6 HOH B 52 452 108 HOH HOH . 
N 6 HOH E 1 401 80 HOH HOH . 
N 6 HOH E 2 402 164 HOH HOH . 
N 6 HOH E 3 403 17 HOH HOH . 
N 6 HOH E 4 404 73 HOH HOH . 
N 6 HOH E 5 405 126 HOH HOH . 
N 6 HOH E 6 406 249 HOH HOH . 
N 6 HOH E 7 407 22 HOH HOH . 
N 6 HOH E 8 408 7 HOH HOH . 
N 6 HOH E 9 409 30 HOH HOH . 
N 6 HOH E 10 410 44 HOH HOH . 
N 6 HOH E 11 411 16 HOH HOH . 
N 6 HOH E 12 412 24 HOH HOH . 
N 6 HOH E 13 413 134 HOH HOH . 
N 6 HOH E 14 414 77 HOH HOH . 
N 6 HOH E 15 415 66 HOH HOH . 
N 6 HOH E 16 416 36 HOH HOH . 
N 6 HOH E 17 417 68 HOH HOH . 
N 6 HOH E 18 418 2 HOH HOH . 
N 6 HOH E 19 419 23 HOH HOH . 
N 6 HOH E 20 420 12 HOH HOH . 
N 6 HOH E 21 421 157 HOH HOH . 
N 6 HOH E 22 422 37 HOH HOH . 
N 6 HOH E 23 423 29 HOH HOH . 
N 6 HOH E 24 424 248 HOH HOH . 
N 6 HOH E 25 425 9 HOH HOH . 
N 6 HOH E 26 426 119 HOH HOH . 
N 6 HOH E 27 427 26 HOH HOH . 
N 6 HOH E 28 428 70 HOH HOH . 
N 6 HOH E 29 429 55 HOH HOH . 
N 6 HOH E 30 430 60 HOH HOH . 
N 6 HOH E 31 431 58 HOH HOH . 
N 6 HOH E 32 432 11 HOH HOH . 
N 6 HOH E 33 433 259 HOH HOH . 
N 6 HOH E 34 434 162 HOH HOH . 
N 6 HOH E 35 435 18 HOH HOH . 
N 6 HOH E 36 436 33 HOH HOH . 
N 6 HOH E 37 437 131 HOH HOH . 
N 6 HOH E 38 438 118 HOH HOH . 
N 6 HOH E 39 439 8 HOH HOH . 
N 6 HOH E 40 440 21 HOH HOH . 
N 6 HOH E 41 441 267 HOH HOH . 
N 6 HOH E 42 442 228 HOH HOH . 
N 6 HOH E 43 443 232 HOH HOH . 
N 6 HOH E 44 444 250 HOH HOH . 
N 6 HOH E 45 445 79 HOH HOH . 
N 6 HOH E 46 446 84 HOH HOH . 
N 6 HOH E 47 447 40 HOH HOH . 
N 6 HOH E 48 448 130 HOH HOH . 
N 6 HOH E 49 449 57 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 27.373 31.252 64.117 1 77.49 ? S DMS 302 B 1 
HETATM 2 O O DMS . . . D 3 26.99 29.819 64.321 1 76.8 ? O DMS 302 B 1 
HETATM 3 C C1 DMS . . . D 3 26.294 32.321 65.108 1 76.25 ? C1 DMS 302 B 1 
HETATM 4 C C2 DMS . . . D 3 28.976 31.585 64.901 1 77.18 ? C2 DMS 302 B 1 
HETATM 5 H H11 DMS . . . D 3 25.3 32.247 64.752 1 91.57 ? H11 DMS 302 B 1 
HETATM 6 H H12 DMS . . . D 3 26.623 33.325 65.03 1 91.57 ? H12 DMS 302 B 1 
HETATM 7 H H13 DMS . . . D 3 26.329 32.016 66.122 1 91.57 ? H13 DMS 302 B 1 
HETATM 8 H H21 DMS . . . D 3 29.198 32.618 64.828 1 92.69 ? H21 DMS 302 B 1 
HETATM 9 H H22 DMS . . . D 3 28.936 31.304 65.921 1 92.69 ? H22 DMS 302 B 1 
HETATM 10 H H23 DMS . . . D 3 29.732 31.027 64.412 1 92.69 ? H23 DMS 302 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          20 
_model_server_stats.element_count           10 
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