data_6I8M # _model_server_result.job_id 18fL-mt9RdGv9Y8Ojkemcg _model_server_result.datetime_utc '2024-12-26 20:16:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i8m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6I8M # _exptl.entry_id 6I8M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.474 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1~{S})-2-(1-cyclohexylpiperidin-4-yl)-1-methyl-3-oxidanylidene-1~{H}-isoindole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I8M _cell.length_a 58.053 _cell.length_b 64.299 _cell.length_c 97.707 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H29 N3 O2' _chem_comp.formula_weight 355.474 _chem_comp.id H7W _chem_comp.mon_nstd_flag . _chem_comp.name (1~{S})-2-(1-cyclohexylpiperidin-4-yl)-1-methyl-3-oxidanylidene-1~{H}-isoindole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C26 H7W sing 129 n n C24 C23 H7W sing 130 n n C26 C25 H7W sing 131 n n C23 C16 H7W sing 132 n n C25 C22 H7W sing 133 n n C16 C22 H7W sing 134 n n C16 N7 H7W sing 135 n n C14 N7 H7W sing 136 n n C14 C12 H7W sing 137 n n N7 C13 H7W sing 138 n n C12 C9 H7W sing 139 n n C13 C11 H7W sing 140 n n O10 C1 H7W doub 141 n n N17 C8 H7W sing 142 n n C9 C11 H7W sing 143 n n C9 N2 H7W sing 144 n n C1 N2 H7W sing 145 n n C1 C3 H7W sing 146 n n N2 C4 H7W sing 147 n n C8 O15 H7W doub 148 n n C8 C6 H7W sing 149 n n C3 C6 H7W doub 150 n y C3 C5 H7W sing 151 n y C6 C20 H7W sing 152 n y C4 C19 H7W sing 153 n n C4 C5 H7W sing 154 n n C5 C18 H7W doub 155 n y C20 C21 H7W doub 156 n y C18 C21 H7W sing 157 n y C4 H1 H7W sing 158 n n C9 H2 H7W sing 159 n n C11 H3 H7W sing 160 n n C11 H4 H7W sing 161 n n C12 H5 H7W sing 162 n n C12 H6 H7W sing 163 n n C13 H7 H7W sing 164 n n C13 H8 H7W sing 165 n n C14 H9 H7W sing 166 n n C14 H10 H7W sing 167 n n C23 H11 H7W sing 168 n n C23 H12 H7W sing 169 n n C24 H13 H7W sing 170 n n C24 H14 H7W sing 171 n n C25 H15 H7W sing 172 n n C25 H16 H7W sing 173 n n C26 H17 H7W sing 174 n n C26 H18 H7W sing 175 n n C16 H19 H7W sing 176 n n C18 H20 H7W sing 177 n n C19 H21 H7W sing 178 n n C19 H22 H7W sing 179 n n C19 H23 H7W sing 180 n n C20 H24 H7W sing 181 n n C22 H25 H7W sing 182 n n C22 H26 H7W sing 183 n n C21 H28 H7W sing 184 n n N17 H29 H7W sing 185 n n N17 H30 H7W sing 186 n n # _atom_sites.entry_id 6I8M _atom_sites.fract_transf_matrix[1][1] 0.017226 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010235 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H7W A 1 1101 1 H7W 515 . C 3 HOH A 1 1201 25 HOH HOH . C 3 HOH A 2 1202 1 HOH HOH . C 3 HOH A 3 1203 4 HOH HOH . C 3 HOH A 4 1204 29 HOH HOH . C 3 HOH A 5 1205 15 HOH HOH . C 3 HOH A 6 1206 7 HOH HOH . C 3 HOH A 7 1207 21 HOH HOH . C 3 HOH A 8 1208 46 HOH HOH . C 3 HOH A 9 1209 20 HOH HOH . C 3 HOH A 10 1210 41 HOH HOH . C 3 HOH A 11 1211 30 HOH HOH . C 3 HOH A 12 1212 14 HOH HOH . C 3 HOH A 13 1213 8 HOH HOH . C 3 HOH A 14 1214 39 HOH HOH . C 3 HOH A 15 1215 3 HOH HOH . C 3 HOH A 16 1216 6 HOH HOH . C 3 HOH A 17 1217 32 HOH HOH . C 3 HOH A 18 1218 45 HOH HOH . C 3 HOH A 19 1219 24 HOH HOH . C 3 HOH A 20 1220 31 HOH HOH . C 3 HOH A 21 1221 34 HOH HOH . C 3 HOH A 22 1222 43 HOH HOH . C 3 HOH A 23 1223 42 HOH HOH . C 3 HOH A 24 1224 18 HOH HOH . C 3 HOH A 25 1225 48 HOH HOH . C 3 HOH A 26 1226 22 HOH HOH . C 3 HOH A 27 1227 5 HOH HOH . C 3 HOH A 28 1228 33 HOH HOH . C 3 HOH A 29 1229 47 HOH HOH . C 3 HOH A 30 1230 9 HOH HOH . C 3 HOH A 31 1231 19 HOH HOH . C 3 HOH A 32 1232 38 HOH HOH . C 3 HOH A 33 1233 13 HOH HOH . C 3 HOH A 34 1234 36 HOH HOH . C 3 HOH A 35 1235 16 HOH HOH . C 3 HOH A 36 1236 27 HOH HOH . C 3 HOH A 37 1237 11 HOH HOH . C 3 HOH A 38 1238 10 HOH HOH . C 3 HOH A 39 1239 23 HOH HOH . C 3 HOH A 40 1240 12 HOH HOH . C 3 HOH A 41 1241 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 H7W . . . B 2 9.251 22.942 20.952 1 37.31 ? C1 H7W 1101 A 1 HETATM 2 C C3 H7W . . . B 2 10.095 22.841 21.976 1 32.49 ? C3 H7W 1101 A 1 HETATM 3 C C4 H7W . . . B 2 7.982 22.045 22.57 1 40.92 ? C4 H7W 1101 A 1 HETATM 4 C C5 H7W . . . B 2 9.335 22.27 22.979 1 38.27 ? C5 H7W 1101 A 1 HETATM 5 C C6 H7W . . . B 2 11.449 23.176 22.167 1 32.79 ? C6 H7W 1101 A 1 HETATM 6 C C9 H7W . . . B 2 6.97 22.7 20.099 1 47.32 ? C9 H7W 1101 A 1 HETATM 7 C C11 H7W . . . B 2 5.634 23.284 20.576 1 47.3 ? C11 H7W 1101 A 1 HETATM 8 N N2 H7W . . . B 2 7.986 22.518 21.202 1 42.04 ? N2 H7W 1101 A 1 HETATM 9 C C12 H7W . . . B 2 6.808 21.45 19.225 1 43.68 ? C12 H7W 1101 A 1 HETATM 10 C C13 H7W . . . B 2 4.713 23.539 19.405 1 46.25 ? C13 H7W 1101 A 1 HETATM 11 C C14 H7W . . . B 2 5.806 21.696 18.101 1 43.49 ? C14 H7W 1101 A 1 HETATM 12 C C23 H7W . . . B 2 3.408 23.468 16.757 1 55.86 ? C23 H7W 1101 A 1 HETATM 13 C C8 H7W . . . B 2 12.422 23.738 21.23 1 32.43 ? C8 H7W 1101 A 1 HETATM 14 C C24 H7W . . . B 2 2.336 23.239 15.677 1 48.72 ? C24 H7W 1101 A 1 HETATM 15 C C25 H7W . . . B 2 0.893 22.048 17.31 1 57.9 ? C25 H7W 1101 A 1 HETATM 16 C C26 H7W . . . B 2 0.932 23.263 16.352 1 53.3 ? C26 H7W 1101 A 1 HETATM 17 O O10 H7W . . . B 2 9.57 23.438 19.876 1 34.38 ? O10 H7W 1101 A 1 HETATM 18 C C16 H7W . . . B 2 3.468 22.233 17.642 1 51.29 ? C16 H7W 1101 A 1 HETATM 19 C C18 H7W . . . B 2 9.881 22.028 24.193 1 33.61 ? C18 H7W 1101 A 1 HETATM 20 C C19 H7W . . . B 2 7.555 20.574 22.737 1 51.11 ? C19 H7W 1101 A 1 HETATM 21 C C20 H7W . . . B 2 11.997 22.916 23.47 1 32.39 ? C20 H7W 1101 A 1 HETATM 22 C C22 H7W . . . B 2 2.116 22.003 18.311 1 55.12 ? C22 H7W 1101 A 1 HETATM 23 N N7 H7W . . . B 2 4.566 22.292 18.628 1 52.11 ? N7 H7W 1101 A 1 HETATM 24 C C21 H7W . . . B 2 11.214 22.343 24.484 1 33.7 ? C21 H7W 1101 A 1 HETATM 25 O O15 H7W . . . B 2 13.655 23.772 21.532 1 29.98 ? O15 H7W 1101 A 1 HETATM 26 N N17 H7W . . . B 2 12.002 24.141 19.997 1 25.34 ? N17 H7W 1101 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 54 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 26 #