data_6I8T # _model_server_result.job_id ENtzZpT4PnhHF5NwR4na3A _model_server_result.datetime_utc '2024-10-20 20:09:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i8t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6I8T # _exptl.entry_id 6I8T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.474 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1~{R})-2-(1-cyclohexylpiperidin-4-yl)-1-methyl-3-oxidanylidene-1~{H}-isoindole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I8T _cell.length_a 58.181 _cell.length_b 63.965 _cell.length_c 97.678 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I8T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H29 N3 O2' _chem_comp.formula_weight 355.474 _chem_comp.id H7Z _chem_comp.mon_nstd_flag . _chem_comp.name (1~{R})-2-(1-cyclohexylpiperidin-4-yl)-1-methyl-3-oxidanylidene-1~{H}-isoindole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C26 H7Z sing 129 n n C24 C23 H7Z sing 130 n n C26 C25 H7Z sing 131 n n C25 C22 H7Z sing 132 n n C23 C16 H7Z sing 133 n n C16 C22 H7Z sing 134 n n C16 N7 H7Z sing 135 n n C14 N7 H7Z sing 136 n n C14 C12 H7Z sing 137 n n N7 C13 H7Z sing 138 n n C13 C11 H7Z sing 139 n n C12 C9 H7Z sing 140 n n O10 C1 H7Z doub 141 n n C9 C11 H7Z sing 142 n n C9 N2 H7Z sing 143 n n N17 C8 H7Z sing 144 n n C1 N2 H7Z sing 145 n n C1 C3 H7Z sing 146 n n N2 C4 H7Z sing 147 n n C8 O15 H7Z doub 148 n n C8 C6 H7Z sing 149 n n C3 C6 H7Z doub 150 n y C3 C5 H7Z sing 151 n y C4 C5 H7Z sing 152 n n C4 C19 H7Z sing 153 n n C6 C20 H7Z sing 154 n y C5 C18 H7Z doub 155 n y C20 C21 H7Z doub 156 n y C18 C21 H7Z sing 157 n y C9 H1 H7Z sing 158 n n C11 H2 H7Z sing 159 n n C11 H3 H7Z sing 160 n n C12 H4 H7Z sing 161 n n C12 H5 H7Z sing 162 n n C13 H6 H7Z sing 163 n n C13 H7 H7Z sing 164 n n C14 H8 H7Z sing 165 n n C14 H9 H7Z sing 166 n n C4 H11 H7Z sing 167 n n N17 H12 H7Z sing 168 n n N17 H13 H7Z sing 169 n n C18 H14 H7Z sing 170 n n C19 H15 H7Z sing 171 n n C19 H16 H7Z sing 172 n n C19 H17 H7Z sing 173 n n C20 H18 H7Z sing 174 n n C21 H19 H7Z sing 175 n n C22 H20 H7Z sing 176 n n C22 H21 H7Z sing 177 n n C24 H22 H7Z sing 178 n n C24 H23 H7Z sing 179 n n C25 H24 H7Z sing 180 n n C25 H25 H7Z sing 181 n n C26 H26 H7Z sing 182 n n C26 H27 H7Z sing 183 n n C23 H28 H7Z sing 184 n n C23 H29 H7Z sing 185 n n C16 H30 H7Z sing 186 n n # _atom_sites.entry_id 6I8T _atom_sites.fract_transf_matrix[1][1] 0.017188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H7Z A 1 1101 1 H7Z 516 . C 3 HOH A 1 1201 25 HOH HOH . C 3 HOH A 2 1202 36 HOH HOH . C 3 HOH A 3 1203 44 HOH HOH . C 3 HOH A 4 1204 43 HOH HOH . C 3 HOH A 5 1205 46 HOH HOH . C 3 HOH A 6 1206 32 HOH HOH . C 3 HOH A 7 1207 6 HOH HOH . C 3 HOH A 8 1208 33 HOH HOH . C 3 HOH A 9 1209 37 HOH HOH . C 3 HOH A 10 1210 11 HOH HOH . C 3 HOH A 11 1211 29 HOH HOH . C 3 HOH A 12 1212 26 HOH HOH . C 3 HOH A 13 1213 10 HOH HOH . C 3 HOH A 14 1214 15 HOH HOH . C 3 HOH A 15 1215 12 HOH HOH . C 3 HOH A 16 1216 9 HOH HOH . C 3 HOH A 17 1217 48 HOH HOH . C 3 HOH A 18 1218 47 HOH HOH . C 3 HOH A 19 1219 21 HOH HOH . C 3 HOH A 20 1220 20 HOH HOH . C 3 HOH A 21 1221 14 HOH HOH . C 3 HOH A 22 1222 42 HOH HOH . C 3 HOH A 23 1223 16 HOH HOH . C 3 HOH A 24 1224 24 HOH HOH . C 3 HOH A 25 1225 2 HOH HOH . C 3 HOH A 26 1226 7 HOH HOH . C 3 HOH A 27 1227 4 HOH HOH . C 3 HOH A 28 1228 40 HOH HOH . C 3 HOH A 29 1229 31 HOH HOH . C 3 HOH A 30 1230 13 HOH HOH . C 3 HOH A 31 1231 28 HOH HOH . C 3 HOH A 32 1232 3 HOH HOH . C 3 HOH A 33 1233 19 HOH HOH . C 3 HOH A 34 1234 17 HOH HOH . C 3 HOH A 35 1235 8 HOH HOH . C 3 HOH A 36 1236 22 HOH HOH . C 3 HOH A 37 1237 30 HOH HOH . C 3 HOH A 38 1238 45 HOH HOH . C 3 HOH A 39 1239 39 HOH HOH . C 3 HOH A 40 1240 35 HOH HOH . C 3 HOH A 41 1241 38 HOH HOH . C 3 HOH A 42 1242 5 HOH HOH . C 3 HOH A 43 1243 41 HOH HOH . C 3 HOH A 44 1244 18 HOH HOH . C 3 HOH A 45 1245 1 HOH HOH . C 3 HOH A 46 1246 34 HOH HOH . C 3 HOH A 47 1247 27 HOH HOH . C 3 HOH A 48 1248 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 H7Z . . . B 2 12.453 23.528 21.224 1 36.86 ? C8 H7Z 1101 A 1 HETATM 2 C C9 H7Z . . . B 2 7.312 21.733 19.536 1 69.32 ? C9 H7Z 1101 A 1 HETATM 3 C C11 H7Z . . . B 2 6.274 22.862 19.711 1 76.61 ? C11 H7Z 1101 A 1 HETATM 4 C C12 H7Z . . . B 2 6.646 20.349 19.249 1 77 ? C12 H7Z 1101 A 1 HETATM 5 C C13 H7Z . . . B 2 5.424 22.935 18.485 1 83.05 ? C13 H7Z 1101 A 1 HETATM 6 C C14 H7Z . . . B 2 5.626 20.477 18.072 1 78.28 ? C14 H7Z 1101 A 1 HETATM 7 N N7 H7Z . . . B 2 4.72 21.656 18.253 1 91.98 ? N7 H7Z 1101 A 1 HETATM 8 C C5 H7Z . . . B 2 9.378 21.853 22.696 1 50.5 ? C5 H7Z 1101 A 1 HETATM 9 C C3 H7Z . . . B 2 10.198 22.43 21.76 1 45.28 ? C3 H7Z 1101 A 1 HETATM 10 C C4 H7Z . . . B 2 8.182 21.396 22.08 1 52.04 ? C4 H7Z 1101 A 1 HETATM 11 N N2 H7Z . . . B 2 8.287 21.825 20.714 1 63.57 ? N2 H7Z 1101 A 1 HETATM 12 C C1 H7Z . . . B 2 9.509 22.364 20.611 1 53.51 ? C1 H7Z 1101 A 1 HETATM 13 N N17 H7Z . . . B 2 12.125 24.007 19.993 1 32.62 ? N17 H7Z 1101 A 1 HETATM 14 C C18 H7Z . . . B 2 9.763 21.746 23.979 1 45.11 ? C18 H7Z 1101 A 1 HETATM 15 C C19 H7Z . . . B 2 6.84 21.755 22.72 1 54.01 ? C19 H7Z 1101 A 1 HETATM 16 C C20 H7Z . . . B 2 11.828 22.835 23.446 1 40.96 ? C20 H7Z 1101 A 1 HETATM 17 C C21 H7Z . . . B 2 10.989 22.24 24.387 1 41.26 ? C21 H7Z 1101 A 1 HETATM 18 C C22 H7Z . . . B 2 2.315 21.384 17.749 1 101.94 ? C22 H7Z 1101 A 1 HETATM 19 C C24 H7Z . . . B 2 2.523 23.518 15.676 1 99.38 ? C24 H7Z 1101 A 1 HETATM 20 C C25 H7Z . . . B 2 1.193 21.626 16.696 1 110.79 ? C25 H7Z 1101 A 1 HETATM 21 C C26 H7Z . . . B 2 1.14 23.097 16.206 1 102.34 ? C26 H7Z 1101 A 1 HETATM 22 C C23 H7Z . . . B 2 3.561 23.341 16.792 1 99.21 ? C23 H7Z 1101 A 1 HETATM 23 C C16 H7Z . . . B 2 3.672 21.856 17.231 1 94.14 ? C16 H7Z 1101 A 1 HETATM 24 O O10 H7Z . . . B 2 9.891 22.814 19.536 1 48.31 ? O10 H7Z 1101 A 1 HETATM 25 C C6 H7Z . . . B 2 11.451 22.946 22.095 1 42.22 ? C6 H7Z 1101 A 1 HETATM 26 O O15 H7Z . . . B 2 13.641 23.528 21.572 1 39.38 ? O15 H7Z 1101 A 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 26 #