data_6I8V # _model_server_result.job_id pGp-_Eq54OkbytYSxjcdkg _model_server_result.datetime_utc '2024-10-20 00:31:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i8v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6I8V # _exptl.entry_id 6I8V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I8V _cell.length_a 84.155 _cell.length_b 84.155 _cell.length_c 83.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I8V _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 104 A TYR 104 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.958 ? metalc ? metalc2 A OH TYR 104 A TYR 104 1_555 D CA CA . A CA 303 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? metalc ? metalc3 A OE2 GLU 121 A GLU 121 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc4 A OE2 GLU 121 A GLU 121 1_555 C CA CA . A CA 302 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc5 B O3G ATP . A ATP 301 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc6 B O3G ATP . A ATP 301 1_555 C CA CA . A CA 302 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc7 C CA CA . A CA 302 1_555 G O HOH . A HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc8 C CA CA . A CA 302 1_555 G O HOH . A HOH 458 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6I8V _atom_sites.fract_transf_matrix[1][1] 0.011883 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011883 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011926 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 301 1 ATP ATP . C 3 CA A 1 302 2 CA CA . D 3 CA A 1 303 3 CA CA . E 4 BU1 A 1 304 1 BU1 BU1 . F 4 BU1 A 1 305 2 BU1 BU1 . G 5 HOH A 1 401 18 HOH HOH . G 5 HOH A 2 402 30 HOH HOH . G 5 HOH A 3 403 19 HOH HOH . G 5 HOH A 4 404 57 HOH HOH . G 5 HOH A 5 405 3 HOH HOH . G 5 HOH A 6 406 32 HOH HOH . G 5 HOH A 7 407 48 HOH HOH . G 5 HOH A 8 408 52 HOH HOH . G 5 HOH A 9 409 10 HOH HOH . G 5 HOH A 10 410 72 HOH HOH . G 5 HOH A 11 411 11 HOH HOH . G 5 HOH A 12 412 39 HOH HOH . G 5 HOH A 13 413 40 HOH HOH . G 5 HOH A 14 414 62 HOH HOH . G 5 HOH A 15 415 46 HOH HOH . G 5 HOH A 16 416 45 HOH HOH . G 5 HOH A 17 417 36 HOH HOH . G 5 HOH A 18 418 37 HOH HOH . G 5 HOH A 19 419 6 HOH HOH . G 5 HOH A 20 420 34 HOH HOH . G 5 HOH A 21 421 56 HOH HOH . G 5 HOH A 22 422 67 HOH HOH . G 5 HOH A 23 423 8 HOH HOH . G 5 HOH A 24 424 15 HOH HOH . G 5 HOH A 25 425 35 HOH HOH . G 5 HOH A 26 426 7 HOH HOH . G 5 HOH A 27 427 28 HOH HOH . G 5 HOH A 28 428 23 HOH HOH . G 5 HOH A 29 429 73 HOH HOH . G 5 HOH A 30 430 59 HOH HOH . G 5 HOH A 31 431 51 HOH HOH . G 5 HOH A 32 432 41 HOH HOH . G 5 HOH A 33 433 4 HOH HOH . G 5 HOH A 34 434 74 HOH HOH . G 5 HOH A 35 435 16 HOH HOH . G 5 HOH A 36 436 63 HOH HOH . G 5 HOH A 37 437 1 HOH HOH . G 5 HOH A 38 438 2 HOH HOH . G 5 HOH A 39 439 38 HOH HOH . G 5 HOH A 40 440 49 HOH HOH . G 5 HOH A 41 441 26 HOH HOH . G 5 HOH A 42 442 29 HOH HOH . G 5 HOH A 43 443 14 HOH HOH . G 5 HOH A 44 444 66 HOH HOH . G 5 HOH A 45 445 53 HOH HOH . G 5 HOH A 46 446 44 HOH HOH . G 5 HOH A 47 447 61 HOH HOH . G 5 HOH A 48 448 22 HOH HOH . G 5 HOH A 49 449 75 HOH HOH . G 5 HOH A 50 450 20 HOH HOH . G 5 HOH A 51 451 42 HOH HOH . G 5 HOH A 52 452 12 HOH HOH . G 5 HOH A 53 453 43 HOH HOH . G 5 HOH A 54 454 31 HOH HOH . G 5 HOH A 55 455 25 HOH HOH . G 5 HOH A 56 456 9 HOH HOH . G 5 HOH A 57 457 13 HOH HOH . G 5 HOH A 58 458 17 HOH HOH . G 5 HOH A 59 459 71 HOH HOH . G 5 HOH A 60 460 47 HOH HOH . G 5 HOH A 61 461 58 HOH HOH . G 5 HOH A 62 462 5 HOH HOH . G 5 HOH A 63 463 33 HOH HOH . G 5 HOH A 64 464 21 HOH HOH . G 5 HOH A 65 465 27 HOH HOH . G 5 HOH A 66 466 70 HOH HOH . G 5 HOH A 67 467 76 HOH HOH . G 5 HOH A 68 468 64 HOH HOH . G 5 HOH A 69 469 65 HOH HOH . G 5 HOH A 70 470 60 HOH HOH . G 5 HOH A 71 471 54 HOH HOH . G 5 HOH A 72 472 24 HOH HOH . G 5 HOH A 73 473 77 HOH HOH . G 5 HOH A 74 474 55 HOH HOH . G 5 HOH A 75 475 68 HOH HOH . G 5 HOH A 76 476 50 HOH HOH . G 5 HOH A 77 477 69 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 0 _atom_site.Cartn_y -21.367 _atom_site.Cartn_z 0 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 27.55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #