data_6I90 # _model_server_result.job_id z0dKWPkChRkh5UPYT-TEWw _model_server_result.datetime_utc '2024-12-01 21:19:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i90 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6I90 # _exptl.entry_id 6I90 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I90 _cell.length_a 56.073 _cell.length_b 96.77 _cell.length_c 128.704 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I90 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 83 A GLU 69 1_555 C MN MN3 . A MN3 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc2 A OE2 GLU 116 A GLU 102 1_555 C MN MN3 . A MN3 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc3 A OE1 GLU 116 A GLU 102 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc4 A ND1 HIS 119 A HIS 105 1_555 C MN MN3 . A MN3 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc5 A NE2 HIS 144 A HIS 130 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc6 A OE2 GLU 181 A GLU 167 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc7 A OE2 GLU 216 A GLU 202 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc8 A ND1 HIS 219 A HIS 205 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc9 B O1 PLM . A PLM 401 1_555 C MN MN3 . A MN3 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc10 B O2 PLM . A PLM 401 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc11 C MN MN3 . A MN3 402 1_555 F O HOH . A HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc12 C MN MN3 . A MN3 402 1_555 F O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc13 E FE FE . A FE 404 1_555 F O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 247 n n C1 O2 PLM doub 248 n n C1 C2 PLM sing 249 n n O1 H PLM sing 250 n n C2 C3 PLM sing 251 n n C2 H21 PLM sing 252 n n C2 H22 PLM sing 253 n n C3 C4 PLM sing 254 n n C3 H31 PLM sing 255 n n C3 H32 PLM sing 256 n n C4 C5 PLM sing 257 n n C4 H41 PLM sing 258 n n C4 H42 PLM sing 259 n n C5 C6 PLM sing 260 n n C5 H51 PLM sing 261 n n C5 H52 PLM sing 262 n n C6 C7 PLM sing 263 n n C6 H61 PLM sing 264 n n C6 H62 PLM sing 265 n n C7 C8 PLM sing 266 n n C7 H71 PLM sing 267 n n C7 H72 PLM sing 268 n n C8 C9 PLM sing 269 n n C8 H81 PLM sing 270 n n C8 H82 PLM sing 271 n n C9 CA PLM sing 272 n n C9 H91 PLM sing 273 n n C9 H92 PLM sing 274 n n CA CB PLM sing 275 n n CA HA1 PLM sing 276 n n CA HA2 PLM sing 277 n n CB CC PLM sing 278 n n CB HB1 PLM sing 279 n n CB HB2 PLM sing 280 n n CC CD PLM sing 281 n n CC HC1 PLM sing 282 n n CC HC2 PLM sing 283 n n CD CE PLM sing 284 n n CD HD1 PLM sing 285 n n CD HD2 PLM sing 286 n n CE CF PLM sing 287 n n CE HE1 PLM sing 288 n n CE HE2 PLM sing 289 n n CF CG PLM sing 290 n n CF HF1 PLM sing 291 n n CF HF2 PLM sing 292 n n CG HG1 PLM sing 293 n n CG HG2 PLM sing 294 n n CG HG3 PLM sing 295 n n # _atom_sites.entry_id 6I90 _atom_sites.fract_transf_matrix[1][1] 0.017834 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00777 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 401 1 PLM PLM . C 3 MN3 A 1 402 1 MN3 MN3 . D 4 MN A 1 403 2 MN MN . E 5 FE A 1 404 1 FE FE . F 6 HOH A 1 501 63 HOH HOH . F 6 HOH A 2 502 14 HOH HOH . F 6 HOH A 3 503 37 HOH HOH . F 6 HOH A 4 504 2 HOH HOH . F 6 HOH A 5 505 17 HOH HOH . F 6 HOH A 6 506 55 HOH HOH . F 6 HOH A 7 507 43 HOH HOH . F 6 HOH A 8 508 7 HOH HOH . F 6 HOH A 9 509 62 HOH HOH . F 6 HOH A 10 510 75 HOH HOH . F 6 HOH A 11 511 4 HOH HOH . F 6 HOH A 12 512 39 HOH HOH . F 6 HOH A 13 513 42 HOH HOH . F 6 HOH A 14 514 41 HOH HOH . F 6 HOH A 15 515 29 HOH HOH . F 6 HOH A 16 516 13 HOH HOH . F 6 HOH A 17 517 51 HOH HOH . F 6 HOH A 18 518 49 HOH HOH . F 6 HOH A 19 519 21 HOH HOH . F 6 HOH A 20 520 10 HOH HOH . F 6 HOH A 21 521 46 HOH HOH . F 6 HOH A 22 522 6 HOH HOH . F 6 HOH A 23 523 11 HOH HOH . F 6 HOH A 24 524 28 HOH HOH . F 6 HOH A 25 525 18 HOH HOH . F 6 HOH A 26 526 16 HOH HOH . F 6 HOH A 27 527 3 HOH HOH . F 6 HOH A 28 528 23 HOH HOH . F 6 HOH A 29 529 1 HOH HOH . F 6 HOH A 30 530 5 HOH HOH . F 6 HOH A 31 531 59 HOH HOH . F 6 HOH A 32 532 27 HOH HOH . F 6 HOH A 33 533 12 HOH HOH . F 6 HOH A 34 534 20 HOH HOH . F 6 HOH A 35 535 9 HOH HOH . F 6 HOH A 36 536 61 HOH HOH . F 6 HOH A 37 537 66 HOH HOH . F 6 HOH A 38 538 32 HOH HOH . F 6 HOH A 39 539 25 HOH HOH . F 6 HOH A 40 540 31 HOH HOH . F 6 HOH A 41 541 22 HOH HOH . F 6 HOH A 42 542 19 HOH HOH . F 6 HOH A 43 543 33 HOH HOH . F 6 HOH A 44 544 47 HOH HOH . F 6 HOH A 45 545 52 HOH HOH . F 6 HOH A 46 546 65 HOH HOH . F 6 HOH A 47 547 15 HOH HOH . F 6 HOH A 48 548 48 HOH HOH . F 6 HOH A 49 549 38 HOH HOH . F 6 HOH A 50 550 71 HOH HOH . F 6 HOH A 51 551 53 HOH HOH . F 6 HOH A 52 552 36 HOH HOH . F 6 HOH A 53 553 34 HOH HOH . F 6 HOH A 54 554 40 HOH HOH . F 6 HOH A 55 555 64 HOH HOH . F 6 HOH A 56 556 82 HOH HOH . F 6 HOH A 57 557 30 HOH HOH . F 6 HOH A 58 558 8 HOH HOH . F 6 HOH A 59 559 45 HOH HOH . F 6 HOH A 60 560 24 HOH HOH . F 6 HOH A 61 561 68 HOH HOH . F 6 HOH A 62 562 26 HOH HOH . F 6 HOH A 63 563 44 HOH HOH . F 6 HOH A 64 564 35 HOH HOH . F 6 HOH A 65 565 58 HOH HOH . F 6 HOH A 66 566 60 HOH HOH . F 6 HOH A 67 567 56 HOH HOH . F 6 HOH A 68 568 70 HOH HOH . F 6 HOH A 69 569 74 HOH HOH . F 6 HOH A 70 570 80 HOH HOH . F 6 HOH A 71 571 77 HOH HOH . F 6 HOH A 72 572 72 HOH HOH . F 6 HOH A 73 573 86 HOH HOH . F 6 HOH A 74 574 54 HOH HOH . F 6 HOH A 75 575 76 HOH HOH . F 6 HOH A 76 576 85 HOH HOH . F 6 HOH A 77 577 50 HOH HOH . F 6 HOH A 78 578 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . B 2 -7.91 12.167 20.768 1 47.09 ? C1 PLM 401 A 1 HETATM 2 O O1 PLM . . . B 2 -8.579 11.44 21.551 1 50.54 ? O1 PLM 401 A 1 HETATM 3 O O2 PLM . . . B 2 -6.611 12.201 20.627 1 45.15 ? O2 PLM 401 A 1 HETATM 4 C C2 PLM . . . B 2 -8.793 13.175 19.866 1 35.67 ? C2 PLM 401 A 1 HETATM 5 C C3 PLM . . . B 2 -10.171 13.554 20.421 1 43.61 ? C3 PLM 401 A 1 HETATM 6 C C4 PLM . . . B 2 -10.771 14.757 19.648 1 49.48 ? C4 PLM 401 A 1 HETATM 7 C C5 PLM . . . B 2 -12.171 15.19 20.099 1 49.24 ? C5 PLM 401 A 1 HETATM 8 C C6 PLM . . . B 2 -12.621 16.473 19.398 1 48.72 ? C6 PLM 401 A 1 HETATM 9 C C7 PLM . . . B 2 -14.094 16.795 19.574 1 47.91 ? C7 PLM 401 A 1 HETATM 10 C C8 PLM . . . B 2 -14.406 17.26 20.916 1 47.41 ? C8 PLM 401 A 1 HETATM 11 C C9 PLM . . . B 2 -15.328 18.463 20.922 1 52.39 ? C9 PLM 401 A 1 HETATM 12 C CA PLM . . . B 2 -14.649 19.818 20.75 1 51.62 ? CA PLM 401 A 1 HETATM 13 C CB PLM . . . B 2 -15.347 20.859 21.622 1 56.83 ? CB PLM 401 A 1 HETATM 14 C CC PLM . . . B 2 -14.865 22.301 21.476 1 52.65 ? CC PLM 401 A 1 HETATM 15 C CD PLM . . . B 2 -15.604 23.281 22.465 1 49.77 ? CD PLM 401 A 1 HETATM 16 C CE PLM . . . B 2 -16.664 24.161 21.789 1 49.19 ? CE PLM 401 A 1 HETATM 17 C CF PLM . . . B 2 -17.533 25.055 22.72 1 50.61 ? CF PLM 401 A 1 HETATM 18 C CG PLM . . . B 2 -18.975 24.535 22.933 1 51.28 ? CG PLM 401 A 1 HETATM 19 H H21 PLM . . . B 2 -8.892 12.72 18.869 1 42.8 ? H21 PLM 401 A 1 HETATM 20 H H22 PLM . . . B 2 -8.187 14.083 19.714 1 42.8 ? H22 PLM 401 A 1 HETATM 21 H H31 PLM . . . B 2 -10.08 13.792 21.489 1 52.34 ? H31 PLM 401 A 1 HETATM 22 H H32 PLM . . . B 2 -10.842 12.686 20.36 1 52.34 ? H32 PLM 401 A 1 HETATM 23 H H41 PLM . . . B 2 -10.805 14.517 18.573 1 59.37 ? H41 PLM 401 A 1 HETATM 24 H H42 PLM . . . B 2 -10.09 15.618 19.736 1 59.37 ? H42 PLM 401 A 1 HETATM 25 H H51 PLM . . . B 2 -12.175 15.343 21.189 1 59.09 ? H51 PLM 401 A 1 HETATM 26 H H52 PLM . . . B 2 -12.892 14.384 19.893 1 59.09 ? H52 PLM 401 A 1 HETATM 27 H H61 PLM . . . B 2 -12.394 16.397 18.324 1 58.46 ? H61 PLM 401 A 1 HETATM 28 H H62 PLM . . . B 2 -12.022 17.316 19.775 1 58.46 ? H62 PLM 401 A 1 HETATM 29 H H71 PLM . . . B 2 -14.693 15.899 19.349 1 57.5 ? H71 PLM 401 A 1 HETATM 30 H H72 PLM . . . B 2 -14.392 17.559 18.841 1 57.5 ? H72 PLM 401 A 1 HETATM 31 H H81 PLM . . . B 2 -13.473 17.512 21.442 1 56.9 ? H81 PLM 401 A 1 HETATM 32 H H82 PLM . . . B 2 -14.87 16.442 21.487 1 56.9 ? H82 PLM 401 A 1 HETATM 33 H H91 PLM . . . B 2 -15.895 18.469 21.864 1 62.87 ? H91 PLM 401 A 1 HETATM 34 H H92 PLM . . . B 2 -16.077 18.339 20.126 1 62.87 ? H92 PLM 401 A 1 HETATM 35 H HA1 PLM . . . B 2 -14.683 20.128 19.695 1 61.94 ? HA1 PLM 401 A 1 HETATM 36 H HA2 PLM . . . B 2 -13.588 19.745 21.031 1 61.94 ? HA2 PLM 401 A 1 HETATM 37 H HB1 PLM . . . B 2 -15.244 20.56 22.676 1 68.19 ? HB1 PLM 401 A 1 HETATM 38 H HB2 PLM . . . B 2 -16.427 20.825 21.412 1 68.19 ? HB2 PLM 401 A 1 HETATM 39 H HC1 PLM . . . B 2 -15.021 22.638 20.44 1 63.19 ? HC1 PLM 401 A 1 HETATM 40 H HC2 PLM . . . B 2 -13.781 22.345 21.657 1 63.19 ? HC2 PLM 401 A 1 HETATM 41 H HD1 PLM . . . B 2 -14.86 23.925 22.958 1 59.73 ? HD1 PLM 401 A 1 HETATM 42 H HD2 PLM . . . B 2 -16.078 22.695 23.266 1 59.73 ? HD2 PLM 401 A 1 HETATM 43 H HE1 PLM . . . B 2 -17.334 23.516 21.201 1 59.03 ? HE1 PLM 401 A 1 HETATM 44 H HE2 PLM . . . B 2 -16.164 24.809 21.052 1 59.03 ? HE2 PLM 401 A 1 HETATM 45 H HF1 PLM . . . B 2 -17.573 26.073 22.305 1 60.74 ? HF1 PLM 401 A 1 HETATM 46 H HF2 PLM . . . B 2 -17.033 25.147 23.696 1 60.74 ? HF2 PLM 401 A 1 HETATM 47 H HG1 PLM . . . B 2 -19.546 25.196 23.595 1 61.53 ? HG1 PLM 401 A 1 HETATM 48 H HG2 PLM . . . B 2 -18.973 23.535 23.384 1 61.53 ? HG2 PLM 401 A 1 HETATM 49 H HG3 PLM . . . B 2 -19.517 24.468 21.981 1 61.53 ? HG3 PLM 401 A 1 # _model_server_stats.io_time_ms 82 _model_server_stats.parse_time_ms 47 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 604 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 49 #