data_6I98
#
_model_server_result.job_id            EJEZQ4rPLPpCQwjHUqLwsA 
_model_server_result.datetime_utc      '2024-11-21 23:34:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6i98 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":901}' 
#
_entry.id    6I98 
#
_exptl.entry_id    6I98 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6I98 
_cell.length_a            174.554 
_cell.length_b            174.554 
_cell.length_c            180.245 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6I98 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 655 A CYS 798 1_555 A SG CYS 661 A CYS 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc1 A O LYS 120 A LYS 263 1_555 AA NA NA . A NA 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? 
metalc ? metalc2 A OD2 ASP 263 A ASP 406 1_555 B NI NI . A NI 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
metalc ? metalc3 A OE2 GLU 485 A GLU 628 1_555 AA NA NA . A NA 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6I98 
_atom_sites.fract_transf_matrix[1][1]    0.005729 
_atom_sites.fract_transf_matrix[1][2]    0.003308 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006615 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005548 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI A 1 901 1 NI NI . 
C 3 GOL A 1 902 1 GOL GOL . 
D 3 GOL A 1 903 2 GOL GOL . 
E 3 GOL A 1 904 3 GOL GOL . 
F 3 GOL A 1 905 4 GOL GOL . 
G 4 C8E A 1 906 1 C8E C8E . 
H 4 C8E A 1 907 2 C8E C8E . 
I 4 C8E A 1 908 3 C8E C8E . 
J 4 C8E A 1 909 4 C8E C8E . 
K 5 FTT A 1 910 1 FTT FTT . 
L 5 FTT A 1 911 2 FTT FTT . 
M 5 FTT A 1 912 3 FTT FTT . 
N 6 SO4 A 1 913 1 SO4 SO4 . 
O 6 SO4 A 1 914 2 SO4 SO4 . 
P 6 SO4 A 1 915 3 SO4 SO4 . 
Q 6 SO4 A 1 916 4 SO4 SO4 . 
R 6 SO4 A 1 917 5 SO4 SO4 . 
S 6 SO4 A 1 918 6 SO4 SO4 . 
T 6 SO4 A 1 919 7 SO4 SO4 . 
U 6 SO4 A 1 920 8 SO4 SO4 . 
V 6 SO4 A 1 921 9 SO4 SO4 . 
W 6 SO4 A 1 922 10 SO4 SO4 . 
X 6 SO4 A 1 923 12 SO4 SO4 . 
Y 6 SO4 A 1 924 14 SO4 SO4 . 
Z 7 NA A 1 925 1 NA NA . 
AA 7 NA A 1 926 2 NA NA . 
BA 8 HOH A 1 1001 10 HOH HOH . 
BA 8 HOH A 2 1002 1 HOH HOH . 
BA 8 HOH A 3 1003 2 HOH HOH . 
BA 8 HOH A 4 1004 6 HOH HOH . 
BA 8 HOH A 5 1005 4 HOH HOH . 
BA 8 HOH A 6 1006 14 HOH HOH . 
BA 8 HOH A 7 1007 12 HOH HOH . 
BA 8 HOH A 8 1008 17 HOH HOH . 
BA 8 HOH A 9 1009 15 HOH HOH . 
BA 8 HOH A 10 1010 11 HOH HOH . 
BA 8 HOH A 11 1011 8 HOH HOH . 
BA 8 HOH A 12 1012 13 HOH HOH . 
BA 8 HOH A 13 1013 16 HOH HOH . 
BA 8 HOH A 14 1014 9 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -25.296 
_atom_site.Cartn_y               -83.243 
_atom_site.Cartn_z               -22.341 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        99.69 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           901 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#