data_6I98 # _model_server_result.job_id KNfhlsAVCF1L7xL-xqXIWA _model_server_result.datetime_utc '2024-11-22 00:39:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i98 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":907}' # _entry.id 6I98 # _exptl.entry_id 6I98 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6I98 _cell.length_a 174.554 _cell.length_b 174.554 _cell.length_c 180.245 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 655 A CYS 798 1_555 A SG CYS 661 A CYS 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc1 A O LYS 120 A LYS 263 1_555 AA NA NA . A NA 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc2 A OD2 ASP 263 A ASP 406 1_555 B NI NI . A NI 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc3 A OE2 GLU 485 A GLU 628 1_555 AA NA NA . A NA 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 70 n n C1 H11 C8E sing 71 n n C1 H12 C8E sing 72 n n C1 H13 C8E sing 73 n n C2 C3 C8E sing 74 n n C2 H21 C8E sing 75 n n C2 H22 C8E sing 76 n n C3 C4 C8E sing 77 n n C3 H31 C8E sing 78 n n C3 H32 C8E sing 79 n n C4 C5 C8E sing 80 n n C4 H41 C8E sing 81 n n C4 H42 C8E sing 82 n n C5 C6 C8E sing 83 n n C5 H51 C8E sing 84 n n C5 H52 C8E sing 85 n n C6 C7 C8E sing 86 n n C6 H61 C8E sing 87 n n C6 H62 C8E sing 88 n n C7 C8 C8E sing 89 n n C7 H71 C8E sing 90 n n C7 H72 C8E sing 91 n n C8 O9 C8E sing 92 n n C8 H81 C8E sing 93 n n C8 H82 C8E sing 94 n n O9 C10 C8E sing 95 n n C10 C11 C8E sing 96 n n C10 H101 C8E sing 97 n n C10 H102 C8E sing 98 n n C11 O12 C8E sing 99 n n C11 H111 C8E sing 100 n n C11 H112 C8E sing 101 n n O12 C13 C8E sing 102 n n C13 C14 C8E sing 103 n n C13 H131 C8E sing 104 n n C13 H132 C8E sing 105 n n C14 O15 C8E sing 106 n n C14 H141 C8E sing 107 n n C14 H142 C8E sing 108 n n O15 C16 C8E sing 109 n n C16 C17 C8E sing 110 n n C16 H161 C8E sing 111 n n C16 H162 C8E sing 112 n n C17 O18 C8E sing 113 n n C17 H171 C8E sing 114 n n C17 H172 C8E sing 115 n n O18 C19 C8E sing 116 n n C19 C20 C8E sing 117 n n C19 H191 C8E sing 118 n n C19 H192 C8E sing 119 n n C20 O21 C8E sing 120 n n C20 H201 C8E sing 121 n n C20 H202 C8E sing 122 n n O21 HO2 C8E sing 123 n n # _atom_sites.entry_id 6I98 _atom_sites.fract_transf_matrix[1][1] 0.005729 _atom_sites.fract_transf_matrix[1][2] 0.003308 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006615 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005548 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 901 1 NI NI . C 3 GOL A 1 902 1 GOL GOL . D 3 GOL A 1 903 2 GOL GOL . E 3 GOL A 1 904 3 GOL GOL . F 3 GOL A 1 905 4 GOL GOL . G 4 C8E A 1 906 1 C8E C8E . H 4 C8E A 1 907 2 C8E C8E . I 4 C8E A 1 908 3 C8E C8E . J 4 C8E A 1 909 4 C8E C8E . K 5 FTT A 1 910 1 FTT FTT . L 5 FTT A 1 911 2 FTT FTT . M 5 FTT A 1 912 3 FTT FTT . N 6 SO4 A 1 913 1 SO4 SO4 . O 6 SO4 A 1 914 2 SO4 SO4 . P 6 SO4 A 1 915 3 SO4 SO4 . Q 6 SO4 A 1 916 4 SO4 SO4 . R 6 SO4 A 1 917 5 SO4 SO4 . S 6 SO4 A 1 918 6 SO4 SO4 . T 6 SO4 A 1 919 7 SO4 SO4 . U 6 SO4 A 1 920 8 SO4 SO4 . V 6 SO4 A 1 921 9 SO4 SO4 . W 6 SO4 A 1 922 10 SO4 SO4 . X 6 SO4 A 1 923 12 SO4 SO4 . Y 6 SO4 A 1 924 14 SO4 SO4 . Z 7 NA A 1 925 1 NA NA . AA 7 NA A 1 926 2 NA NA . BA 8 HOH A 1 1001 10 HOH HOH . BA 8 HOH A 2 1002 1 HOH HOH . BA 8 HOH A 3 1003 2 HOH HOH . BA 8 HOH A 4 1004 6 HOH HOH . BA 8 HOH A 5 1005 4 HOH HOH . BA 8 HOH A 6 1006 14 HOH HOH . BA 8 HOH A 7 1007 12 HOH HOH . BA 8 HOH A 8 1008 17 HOH HOH . BA 8 HOH A 9 1009 15 HOH HOH . BA 8 HOH A 10 1010 11 HOH HOH . BA 8 HOH A 11 1011 8 HOH HOH . BA 8 HOH A 12 1012 13 HOH HOH . BA 8 HOH A 13 1013 16 HOH HOH . BA 8 HOH A 14 1014 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . H 4 -2.624 -46.082 -9.162 1 83.2 ? C1 C8E 907 A 1 HETATM 2 C C2 C8E . . . H 4 -1.755 -45.829 -10.386 1 85.61 ? C2 C8E 907 A 1 HETATM 3 C C3 C8E . . . H 4 -2.389 -46.319 -11.688 1 85.08 ? C3 C8E 907 A 1 HETATM 4 C C4 C8E . . . H 4 -1.76 -45.691 -12.936 1 85.64 ? C4 C8E 907 A 1 HETATM 5 C C5 C8E . . . H 4 -0.396 -46.246 -13.336 1 89.42 ? C5 C8E 907 A 1 HETATM 6 C C6 C8E . . . H 4 0.339 -45.347 -14.354 1 94.81 ? C6 C8E 907 A 1 HETATM 7 C C7 C8E . . . H 4 -0.236 -45.369 -15.783 1 97.12 ? C7 C8E 907 A 1 HETATM 8 C C8 C8E . . . H 4 0.799 -44.914 -16.836 1 102.63 ? C8 C8E 907 A 1 HETATM 9 O O9 C8E . . . H 4 0.379 -45.12 -18.206 1 106.13 ? O9 C8E 907 A 1 HETATM 10 C C10 C8E . . . H 4 0.622 -46.456 -18.705 1 101.24 ? C10 C8E 907 A 1 HETATM 11 C C11 C8E . . . H 4 -0.077 -46.74 -20.036 1 93.25 ? C11 C8E 907 A 1 HETATM 12 O O12 C8E . . . H 4 -1.336 -47.377 -19.791 1 72.96 ? O12 C8E 907 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #