data_6I98 # _model_server_result.job_id Ibx9nlE34VQdGvJTFSZBBQ _model_server_result.datetime_utc '2024-11-22 00:40:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i98 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":910}' # _entry.id 6I98 # _exptl.entry_id 6I98 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.37 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-HYDROXY-TETRADECANOIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6I98 _cell.length_a 174.554 _cell.length_b 174.554 _cell.length_c 180.245 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 655 A CYS 798 1_555 A SG CYS 661 A CYS 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc1 A O LYS 120 A LYS 263 1_555 AA NA NA . A NA 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc2 A OD2 ASP 263 A ASP 406 1_555 B NI NI . A NI 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc3 A OE2 GLU 485 A GLU 628 1_555 AA NA NA . A NA 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? # _chem_comp.formula 'C14 H28 O3' _chem_comp.formula_weight 244.37 _chem_comp.id FTT _chem_comp.mon_nstd_flag . _chem_comp.name '3-HYDROXY-TETRADECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '3-HYDROXY-MYRISTIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FTT sing 137 n n C1 O2 FTT doub 138 n n C1 O1 FTT sing 139 n n C2 C3 FTT sing 140 n n C2 H21 FTT sing 141 n n C2 H22 FTT sing 142 n n C3 C4 FTT sing 143 n n C3 O3 FTT sing 144 n n C3 H3 FTT sing 145 n n C4 C5 FTT sing 146 n n C4 H41 FTT sing 147 n n C4 H42 FTT sing 148 n n C5 C6 FTT sing 149 n n C5 H51 FTT sing 150 n n C5 H52 FTT sing 151 n n C6 C7 FTT sing 152 n n C6 H61 FTT sing 153 n n C6 H62 FTT sing 154 n n C7 C8 FTT sing 155 n n C7 H71 FTT sing 156 n n C7 H72 FTT sing 157 n n C8 C9 FTT sing 158 n n C8 H81 FTT sing 159 n n C8 H82 FTT sing 160 n n C9 C10 FTT sing 161 n n C9 H91 FTT sing 162 n n C9 H92 FTT sing 163 n n C10 C11 FTT sing 164 n n C10 H101 FTT sing 165 n n C10 H102 FTT sing 166 n n C11 C12 FTT sing 167 n n C11 H111 FTT sing 168 n n C11 H112 FTT sing 169 n n C12 C13 FTT sing 170 n n C12 H121 FTT sing 171 n n C12 H122 FTT sing 172 n n C13 C14 FTT sing 173 n n C13 H131 FTT sing 174 n n C13 H132 FTT sing 175 n n C14 H141 FTT sing 176 n n C14 H142 FTT sing 177 n n C14 H143 FTT sing 178 n n O3 HO3 FTT sing 179 n n O1 HO1 FTT sing 180 n n # _atom_sites.entry_id 6I98 _atom_sites.fract_transf_matrix[1][1] 0.005729 _atom_sites.fract_transf_matrix[1][2] 0.003308 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006615 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005548 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 901 1 NI NI . C 3 GOL A 1 902 1 GOL GOL . D 3 GOL A 1 903 2 GOL GOL . E 3 GOL A 1 904 3 GOL GOL . F 3 GOL A 1 905 4 GOL GOL . G 4 C8E A 1 906 1 C8E C8E . H 4 C8E A 1 907 2 C8E C8E . I 4 C8E A 1 908 3 C8E C8E . J 4 C8E A 1 909 4 C8E C8E . K 5 FTT A 1 910 1 FTT FTT . L 5 FTT A 1 911 2 FTT FTT . M 5 FTT A 1 912 3 FTT FTT . N 6 SO4 A 1 913 1 SO4 SO4 . O 6 SO4 A 1 914 2 SO4 SO4 . P 6 SO4 A 1 915 3 SO4 SO4 . Q 6 SO4 A 1 916 4 SO4 SO4 . R 6 SO4 A 1 917 5 SO4 SO4 . S 6 SO4 A 1 918 6 SO4 SO4 . T 6 SO4 A 1 919 7 SO4 SO4 . U 6 SO4 A 1 920 8 SO4 SO4 . V 6 SO4 A 1 921 9 SO4 SO4 . W 6 SO4 A 1 922 10 SO4 SO4 . X 6 SO4 A 1 923 12 SO4 SO4 . Y 6 SO4 A 1 924 14 SO4 SO4 . Z 7 NA A 1 925 1 NA NA . AA 7 NA A 1 926 2 NA NA . BA 8 HOH A 1 1001 10 HOH HOH . BA 8 HOH A 2 1002 1 HOH HOH . BA 8 HOH A 3 1003 2 HOH HOH . BA 8 HOH A 4 1004 6 HOH HOH . BA 8 HOH A 5 1005 4 HOH HOH . BA 8 HOH A 6 1006 14 HOH HOH . BA 8 HOH A 7 1007 12 HOH HOH . BA 8 HOH A 8 1008 17 HOH HOH . BA 8 HOH A 9 1009 15 HOH HOH . BA 8 HOH A 10 1010 11 HOH HOH . BA 8 HOH A 11 1011 8 HOH HOH . BA 8 HOH A 12 1012 13 HOH HOH . BA 8 HOH A 13 1013 16 HOH HOH . BA 8 HOH A 14 1014 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FTT . . . K 5 8.491 -93.371 -19.691 1 65.74 ? C1 FTT 910 A 1 HETATM 2 C C2 FTT . . . K 5 7.765 -92.06 -19.42 1 54.77 ? C2 FTT 910 A 1 HETATM 3 C C3 FTT . . . K 5 7.104 -92.105 -18.069 1 57.69 ? C3 FTT 910 A 1 HETATM 4 C C4 FTT . . . K 5 8.249 -92.165 -17.06 1 61.03 ? C4 FTT 910 A 1 HETATM 5 C C5 FTT . . . K 5 8.404 -93.447 -16.243 1 58.27 ? C5 FTT 910 A 1 HETATM 6 C C6 FTT . . . K 5 9.799 -93.723 -15.71 1 49.5 ? C6 FTT 910 A 1 HETATM 7 C C7 FTT . . . K 5 10.095 -93.055 -14.378 1 43.22 ? C7 FTT 910 A 1 HETATM 8 C C8 FTT . . . K 5 10.201 -94.031 -13.233 1 46.35 ? C8 FTT 910 A 1 HETATM 9 C C9 FTT . . . K 5 10.958 -93.458 -12.031 1 49.84 ? C9 FTT 910 A 1 HETATM 10 C C10 FTT . . . K 5 10.768 -94.197 -10.706 1 49.55 ? C10 FTT 910 A 1 HETATM 11 C C11 FTT . . . K 5 11.422 -93.498 -9.513 1 50.47 ? C11 FTT 910 A 1 HETATM 12 C C12 FTT . . . K 5 11.746 -94.385 -8.303 1 51.77 ? C12 FTT 910 A 1 HETATM 13 C C13 FTT . . . K 5 12.266 -93.552 -7.136 1 55.06 ? C13 FTT 910 A 1 HETATM 14 C C14 FTT . . . K 5 12.488 -94.254 -5.804 1 56.27 ? C14 FTT 910 A 1 HETATM 15 O O2 FTT . . . K 5 8.548 -93.672 -20.903 1 76.94 ? O2 FTT 910 A 1 HETATM 16 O O3 FTT . . . K 5 6.237 -90.975 -17.893 1 51.07 ? O3 FTT 910 A 1 HETATM 17 O O1 FTT . . . K 5 9.037 -94.158 -18.818 1 60.16 ? O1 FTT 910 A 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 76 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 387 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 17 #