data_6IA1 # _model_server_result.job_id qPTloFTGMxW3c8NX2JMzyw _model_server_result.datetime_utc '2025-01-13 08:56:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ia1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6IA1 # _exptl.entry_id 6IA1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 153.099 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-AZAXANTHINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IA1 _cell.length_a 80.889 _cell.length_b 95.503 _cell.length_c 105.229 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IA1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 80.889 95.503 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 80.889 0 105.229 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 95.503 105.229 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N SER 2 A SER 1 1_555 A C ACE 1 A ACE 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? metalc ? metalc1 A O ILE 89 A ILE 88 1_555 E NA NA . A NA 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc2 A O TYR 92 A TYR 91 1_555 E NA NA . A NA 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc3 A O ILE 95 A ILE 94 1_555 E NA NA . A NA 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc4 A OE1 GLU 137 A GLU 136 1_555 E NA NA . A NA 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc5 E NA NA . A NA 1104 1_555 H O HOH . A HOH 1354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? # _chem_comp.formula 'C4 H3 N5 O2' _chem_comp.formula_weight 153.099 _chem_comp.id AZA _chem_comp.mon_nstd_flag . _chem_comp.name 8-AZAXANTHINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 AZA sing 82 n y N1 C6 AZA sing 83 n y N1 HN1 AZA sing 84 n n C2 O2 AZA doub 85 n n C2 N3 AZA sing 86 n y N3 C4 AZA sing 87 n y N3 HN3 AZA sing 88 n n C4 C5 AZA doub 89 n y C4 N9 AZA sing 90 n y C5 C6 AZA sing 91 n y C5 N7 AZA sing 92 n y C6 O6 AZA doub 93 n n N7 N8 AZA doub 94 n y N8 N9 AZA sing 95 n y N9 HN9 AZA sing 96 n n # _atom_sites.entry_id 6IA1 _atom_sites.fract_transf_matrix[1][1] 0.012363 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010471 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009503 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AZA A 1 1101 300 AZA AZA . C 3 AR A 1 1102 801 AR AR . D 3 AR A 1 1103 802 AR AR . E 4 NA A 1 1104 600 NA NA . F 5 PO4 A 1 1105 601 PO4 PO4 . G 6 ACT A 1 1106 602 ACT ACT . H 7 HOH A 1 1201 414 HOH HOH . H 7 HOH A 2 1202 395 HOH HOH . H 7 HOH A 3 1203 406 HOH HOH . H 7 HOH A 4 1204 376 HOH HOH . H 7 HOH A 5 1205 374 HOH HOH . H 7 HOH A 6 1206 460 HOH HOH . H 7 HOH A 7 1207 503 HOH HOH . H 7 HOH A 8 1208 551 HOH HOH . H 7 HOH A 9 1209 344 HOH HOH . H 7 HOH A 10 1210 418 HOH HOH . H 7 HOH A 11 1211 389 HOH HOH . H 7 HOH A 12 1212 314 HOH HOH . H 7 HOH A 13 1213 461 HOH HOH . H 7 HOH A 14 1214 443 HOH HOH . H 7 HOH A 15 1215 421 HOH HOH . H 7 HOH A 16 1216 323 HOH HOH . H 7 HOH A 17 1217 491 HOH HOH . H 7 HOH A 18 1218 462 HOH HOH . H 7 HOH A 19 1219 361 HOH HOH . H 7 HOH A 20 1220 393 HOH HOH . H 7 HOH A 21 1221 303 HOH HOH . H 7 HOH A 22 1222 471 HOH HOH . H 7 HOH A 23 1223 325 HOH HOH . H 7 HOH A 24 1224 473 HOH HOH . H 7 HOH A 25 1225 347 HOH HOH . H 7 HOH A 26 1226 329 HOH HOH . H 7 HOH A 27 1227 305 HOH HOH . H 7 HOH A 28 1228 306 HOH HOH . H 7 HOH A 29 1229 420 HOH HOH . H 7 HOH A 30 1230 335 HOH HOH . H 7 HOH A 31 1231 353 HOH HOH . H 7 HOH A 32 1232 388 HOH HOH . H 7 HOH A 33 1233 324 HOH HOH . H 7 HOH A 34 1234 318 HOH HOH . H 7 HOH A 35 1235 366 HOH HOH . H 7 HOH A 36 1236 391 HOH HOH . H 7 HOH A 37 1237 342 HOH HOH . H 7 HOH A 38 1238 454 HOH HOH . H 7 HOH A 39 1239 397 HOH HOH . H 7 HOH A 40 1240 402 HOH HOH . H 7 HOH A 41 1241 398 HOH HOH . H 7 HOH A 42 1242 403 HOH HOH . H 7 HOH A 43 1243 356 HOH HOH . H 7 HOH A 44 1244 484 HOH HOH . H 7 HOH A 45 1245 311 HOH HOH . H 7 HOH A 46 1246 455 HOH HOH . H 7 HOH A 47 1247 315 HOH HOH . H 7 HOH A 48 1248 467 HOH HOH . H 7 HOH A 49 1249 390 HOH HOH . H 7 HOH A 50 1250 424 HOH HOH . H 7 HOH A 51 1251 499 HOH HOH . H 7 HOH A 52 1252 392 HOH HOH . H 7 HOH A 53 1253 334 HOH HOH . H 7 HOH A 54 1254 412 HOH HOH . H 7 HOH A 55 1255 396 HOH HOH . H 7 HOH A 56 1256 358 HOH HOH . H 7 HOH A 57 1257 363 HOH HOH . H 7 HOH A 58 1258 312 HOH HOH . H 7 HOH A 59 1259 500 HOH HOH . H 7 HOH A 60 1260 345 HOH HOH . H 7 HOH A 61 1261 308 HOH HOH . H 7 HOH A 62 1262 384 HOH HOH . H 7 HOH A 63 1263 386 HOH HOH . H 7 HOH A 64 1264 326 HOH HOH . H 7 HOH A 65 1265 415 HOH HOH . H 7 HOH A 66 1266 322 HOH HOH . H 7 HOH A 67 1267 331 HOH HOH . H 7 HOH A 68 1268 371 HOH HOH . H 7 HOH A 69 1269 430 HOH HOH . H 7 HOH A 70 1270 381 HOH HOH . H 7 HOH A 71 1271 372 HOH HOH . H 7 HOH A 72 1272 316 HOH HOH . H 7 HOH A 73 1273 426 HOH HOH . H 7 HOH A 74 1274 411 HOH HOH . H 7 HOH A 75 1275 408 HOH HOH . H 7 HOH A 76 1276 442 HOH HOH . H 7 HOH A 77 1277 346 HOH HOH . H 7 HOH A 78 1278 416 HOH HOH . H 7 HOH A 79 1279 449 HOH HOH . H 7 HOH A 80 1280 447 HOH HOH . H 7 HOH A 81 1281 399 HOH HOH . H 7 HOH A 82 1282 385 HOH HOH . H 7 HOH A 83 1283 413 HOH HOH . H 7 HOH A 84 1284 302 HOH HOH . H 7 HOH A 85 1285 496 HOH HOH . H 7 HOH A 86 1286 301 HOH HOH . H 7 HOH A 87 1287 333 HOH HOH . H 7 HOH A 88 1288 309 HOH HOH . H 7 HOH A 89 1289 307 HOH HOH . H 7 HOH A 90 1290 321 HOH HOH . H 7 HOH A 91 1291 452 HOH HOH . H 7 HOH A 92 1292 448 HOH HOH . H 7 HOH A 93 1293 349 HOH HOH . H 7 HOH A 94 1294 370 HOH HOH . H 7 HOH A 95 1295 360 HOH HOH . H 7 HOH A 96 1296 359 HOH HOH . H 7 HOH A 97 1297 383 HOH HOH . H 7 HOH A 98 1298 362 HOH HOH . H 7 HOH A 99 1299 332 HOH HOH . H 7 HOH A 100 1300 313 HOH HOH . H 7 HOH A 101 1301 375 HOH HOH . H 7 HOH A 102 1302 330 HOH HOH . H 7 HOH A 103 1303 472 HOH HOH . H 7 HOH A 104 1304 350 HOH HOH . H 7 HOH A 105 1305 425 HOH HOH . H 7 HOH A 106 1306 310 HOH HOH . H 7 HOH A 107 1307 343 HOH HOH . H 7 HOH A 108 1308 439 HOH HOH . H 7 HOH A 109 1309 410 HOH HOH . H 7 HOH A 110 1310 339 HOH HOH . H 7 HOH A 111 1311 445 HOH HOH . H 7 HOH A 112 1312 367 HOH HOH . H 7 HOH A 113 1313 340 HOH HOH . H 7 HOH A 114 1314 355 HOH HOH . H 7 HOH A 115 1315 457 HOH HOH . H 7 HOH A 116 1316 317 HOH HOH . H 7 HOH A 117 1317 352 HOH HOH . H 7 HOH A 118 1318 422 HOH HOH . H 7 HOH A 119 1319 348 HOH HOH . H 7 HOH A 120 1320 433 HOH HOH . H 7 HOH A 121 1321 428 HOH HOH . H 7 HOH A 122 1322 400 HOH HOH . H 7 HOH A 123 1323 464 HOH HOH . H 7 HOH A 124 1324 364 HOH HOH . H 7 HOH A 125 1325 487 HOH HOH . H 7 HOH A 126 1326 380 HOH HOH . H 7 HOH A 127 1327 338 HOH HOH . H 7 HOH A 128 1328 468 HOH HOH . H 7 HOH A 129 1329 436 HOH HOH . H 7 HOH A 130 1330 341 HOH HOH . H 7 HOH A 131 1331 494 HOH HOH . H 7 HOH A 132 1332 407 HOH HOH . H 7 HOH A 133 1333 351 HOH HOH . H 7 HOH A 134 1334 319 HOH HOH . H 7 HOH A 135 1335 441 HOH HOH . H 7 HOH A 136 1336 489 HOH HOH . H 7 HOH A 137 1337 444 HOH HOH . H 7 HOH A 138 1338 438 HOH HOH . H 7 HOH A 139 1339 476 HOH HOH . H 7 HOH A 140 1340 478 HOH HOH . H 7 HOH A 141 1341 357 HOH HOH . H 7 HOH A 142 1342 466 HOH HOH . H 7 HOH A 143 1343 401 HOH HOH . H 7 HOH A 144 1344 320 HOH HOH . H 7 HOH A 145 1345 379 HOH HOH . H 7 HOH A 146 1346 429 HOH HOH . H 7 HOH A 147 1347 409 HOH HOH . H 7 HOH A 148 1348 404 HOH HOH . H 7 HOH A 149 1349 458 HOH HOH . H 7 HOH A 150 1350 486 HOH HOH . H 7 HOH A 151 1351 470 HOH HOH . H 7 HOH A 152 1352 354 HOH HOH . H 7 HOH A 153 1353 495 HOH HOH . H 7 HOH A 154 1354 394 HOH HOH . H 7 HOH A 155 1355 382 HOH HOH . H 7 HOH A 156 1356 465 HOH HOH . H 7 HOH A 157 1357 327 HOH HOH . H 7 HOH A 158 1358 365 HOH HOH . H 7 HOH A 159 1359 463 HOH HOH . H 7 HOH A 160 1360 490 HOH HOH . H 7 HOH A 161 1361 336 HOH HOH . H 7 HOH A 162 1362 481 HOH HOH . H 7 HOH A 163 1363 434 HOH HOH . H 7 HOH A 164 1364 405 HOH HOH . H 7 HOH A 165 1365 440 HOH HOH . H 7 HOH A 166 1366 373 HOH HOH . H 7 HOH A 167 1367 304 HOH HOH . H 7 HOH A 168 1368 502 HOH HOH . H 7 HOH A 169 1369 432 HOH HOH . H 7 HOH A 170 1370 417 HOH HOH . H 7 HOH A 171 1371 387 HOH HOH . H 7 HOH A 172 1372 337 HOH HOH . H 7 HOH A 173 1373 479 HOH HOH . H 7 HOH A 174 1374 480 HOH HOH . H 7 HOH A 175 1375 431 HOH HOH . H 7 HOH A 176 1376 477 HOH HOH . H 7 HOH A 177 1377 485 HOH HOH . H 7 HOH A 178 1378 459 HOH HOH . H 7 HOH A 179 1379 427 HOH HOH . H 7 HOH A 180 1380 423 HOH HOH . H 7 HOH A 181 1381 377 HOH HOH . H 7 HOH A 182 1382 475 HOH HOH . H 7 HOH A 183 1383 368 HOH HOH . H 7 HOH A 184 1384 328 HOH HOH . H 7 HOH A 185 1385 435 HOH HOH . H 7 HOH A 186 1386 482 HOH HOH . H 7 HOH A 187 1387 492 HOH HOH . H 7 HOH A 188 1388 437 HOH HOH . H 7 HOH A 189 1389 419 HOH HOH . H 7 HOH A 190 1390 446 HOH HOH . H 7 HOH A 191 1391 498 HOH HOH . H 7 HOH A 192 1392 456 HOH HOH . H 7 HOH A 193 1393 469 HOH HOH . H 7 HOH A 194 1394 501 HOH HOH . H 7 HOH A 195 1395 378 HOH HOH . H 7 HOH A 196 1396 493 HOH HOH . H 7 HOH A 197 1397 453 HOH HOH . H 7 HOH A 198 1398 497 HOH HOH . H 7 HOH A 199 1399 483 HOH HOH . H 7 HOH A 200 1400 474 HOH HOH . H 7 HOH A 201 1401 369 HOH HOH . H 7 HOH A 202 1402 450 HOH HOH . H 7 HOH A 203 1403 488 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AZA . . . B 2 30.362 27.514 36.733 1 44.19 ? N1 AZA 1101 A 1 HETATM 2 C C2 AZA . . . B 2 29.621 27.26 37.868 1 48.85 ? C2 AZA 1101 A 1 HETATM 3 O O2 AZA . . . B 2 28.475 27.67 37.977 1 50.36 ? O2 AZA 1101 A 1 HETATM 4 N N3 AZA . . . B 2 30.196 26.529 38.885 1 43.19 ? N3 AZA 1101 A 1 HETATM 5 C C4 AZA . . . B 2 31.476 26.068 38.759 1 48.86 ? C4 AZA 1101 A 1 HETATM 6 C C5 AZA . . . B 2 32.22 26.324 37.604 1 47.87 ? C5 AZA 1101 A 1 HETATM 7 C C6 AZA . . . B 2 31.673 27.073 36.523 1 45.08 ? C6 AZA 1101 A 1 HETATM 8 O O6 AZA . . . B 2 32.234 27.344 35.46 1 46.57 ? O6 AZA 1101 A 1 HETATM 9 N N7 AZA . . . B 2 33.462 25.749 37.769 1 46.57 ? N7 AZA 1101 A 1 HETATM 10 N N8 AZA . . . B 2 33.491 25.175 38.946 1 48.91 ? N8 AZA 1101 A 1 HETATM 11 N N9 AZA . . . B 2 32.306 25.359 39.561 1 51.35 ? N9 AZA 1101 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #