data_6IB0 # _model_server_result.job_id xjh_5jTYjTAuxogxlcEVKQ _model_server_result.datetime_utc '2024-12-21 12:22:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ib0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6IB0 # _exptl.entry_id 6IB0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IB0 _cell.length_a 59.4 _cell.length_b 66 _cell.length_c 86.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IB0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 112 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 218 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CAV _struct_conn.ptnr2_label_comp_id H8Z _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id H8Z _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.597 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 277 n n O1 HO1 PG4 sing 278 n n C1 C2 PG4 sing 279 n n C1 H11 PG4 sing 280 n n C1 H12 PG4 sing 281 n n C2 O2 PG4 sing 282 n n C2 H21 PG4 sing 283 n n C2 H22 PG4 sing 284 n n O2 C3 PG4 sing 285 n n C3 C4 PG4 sing 286 n n C3 H31 PG4 sing 287 n n C3 H32 PG4 sing 288 n n C4 O3 PG4 sing 289 n n C4 H41 PG4 sing 290 n n C4 H42 PG4 sing 291 n n O3 C5 PG4 sing 292 n n C5 C6 PG4 sing 293 n n C5 H51 PG4 sing 294 n n C5 H52 PG4 sing 295 n n C6 O4 PG4 sing 296 n n C6 H61 PG4 sing 297 n n C6 H62 PG4 sing 298 n n O4 C7 PG4 sing 299 n n C7 C8 PG4 sing 300 n n C7 H71 PG4 sing 301 n n C7 H72 PG4 sing 302 n n C8 O5 PG4 sing 303 n n C8 H81 PG4 sing 304 n n C8 H82 PG4 sing 305 n n O5 HO5 PG4 sing 306 n n # _atom_sites.entry_id 6IB0 _atom_sites.fract_transf_matrix[1][1] 0.016835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015152 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011574 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H8Z A 1 501 1 H8Z 104 . C 3 PG4 A 1 502 1 PG4 PG4 . D 4 HOH A 1 601 30 HOH HOH . D 4 HOH A 2 602 43 HOH HOH . D 4 HOH A 3 603 31 HOH HOH . D 4 HOH A 4 604 1 HOH HOH . D 4 HOH A 5 605 10 HOH HOH . D 4 HOH A 6 606 2 HOH HOH . D 4 HOH A 7 607 44 HOH HOH . D 4 HOH A 8 608 15 HOH HOH . D 4 HOH A 9 609 11 HOH HOH . D 4 HOH A 10 610 7 HOH HOH . D 4 HOH A 11 611 23 HOH HOH . D 4 HOH A 12 612 20 HOH HOH . D 4 HOH A 13 613 37 HOH HOH . D 4 HOH A 14 614 12 HOH HOH . D 4 HOH A 15 615 28 HOH HOH . D 4 HOH A 16 616 27 HOH HOH . D 4 HOH A 17 617 3 HOH HOH . D 4 HOH A 18 618 6 HOH HOH . D 4 HOH A 19 619 5 HOH HOH . D 4 HOH A 20 620 18 HOH HOH . D 4 HOH A 21 621 8 HOH HOH . D 4 HOH A 22 622 4 HOH HOH . D 4 HOH A 23 623 25 HOH HOH . D 4 HOH A 24 624 9 HOH HOH . D 4 HOH A 25 625 13 HOH HOH . D 4 HOH A 26 626 16 HOH HOH . D 4 HOH A 27 627 21 HOH HOH . D 4 HOH A 28 628 14 HOH HOH . D 4 HOH A 29 629 19 HOH HOH . D 4 HOH A 30 630 36 HOH HOH . D 4 HOH A 31 631 32 HOH HOH . D 4 HOH A 32 632 22 HOH HOH . D 4 HOH A 33 633 24 HOH HOH . D 4 HOH A 34 634 35 HOH HOH . D 4 HOH A 35 635 17 HOH HOH . D 4 HOH A 36 636 38 HOH HOH . D 4 HOH A 37 637 34 HOH HOH . D 4 HOH A 38 638 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . C 3 7.679 24.081 -2.519 1 58.07 ? O1 PG4 502 A 1 HETATM 2 C C1 PG4 . . . C 3 7.654 22.656 -2.418 1 60.89 ? C1 PG4 502 A 1 HETATM 3 C C2 PG4 . . . C 3 6.251 22.209 -2.011 1 60.16 ? C2 PG4 502 A 1 HETATM 4 O O2 PG4 . . . C 3 5.415 22.178 -3.171 1 59.97 ? O2 PG4 502 A 1 HETATM 5 C C3 PG4 . . . C 3 4.1 21.795 -2.77 1 59.05 ? C3 PG4 502 A 1 HETATM 6 C C4 PG4 . . . C 3 3.193 21.661 -3.996 1 60.84 ? C4 PG4 502 A 1 HETATM 7 O O3 PG4 . . . C 3 3.231 22.866 -4.764 1 58.87 ? O3 PG4 502 A 1 HETATM 8 C C5 PG4 . . . C 3 2.511 22.667 -5.984 1 61.56 ? C5 PG4 502 A 1 HETATM 9 C C6 PG4 . . . C 3 2.757 23.848 -6.925 1 57.83 ? C6 PG4 502 A 1 HETATM 10 O O4 PG4 . . . C 3 4.161 23.987 -7.155 1 56.08 ? O4 PG4 502 A 1 HETATM 11 C C7 PG4 . . . C 3 4.388 25.163 -7.937 1 54.13 ? C7 PG4 502 A 1 HETATM 12 C C8 PG4 . . . C 3 5.881 25.309 -8.242 1 46.59 ? C8 PG4 502 A 1 HETATM 13 O O5 PG4 . . . C 3 6.423 24.036 -8.598 1 47.99 ? O5 PG4 502 A 1 HETATM 14 H H11 PG4 . . . C 3 7.912 22.217 -3.381 1 73.07 ? H11 PG4 502 A 1 HETATM 15 H H12 PG4 . . . C 3 8.373 22.331 -1.665 1 73.07 ? H12 PG4 502 A 1 HETATM 16 H H21 PG4 . . . C 3 6.299 21.214 -1.57 1 72.2 ? H21 PG4 502 A 1 HETATM 17 H H22 PG4 . . . C 3 5.841 22.911 -1.285 1 72.2 ? H22 PG4 502 A 1 HETATM 18 H H31 PG4 . . . C 3 4.146 20.838 -2.25 1 70.86 ? H31 PG4 502 A 1 HETATM 19 H H32 PG4 . . . C 3 3.692 22.553 -2.101 1 70.86 ? H32 PG4 502 A 1 HETATM 20 H H41 PG4 . . . C 3 3.538 20.829 -4.611 1 73.01 ? H41 PG4 502 A 1 HETATM 21 H H42 PG4 . . . C 3 2.171 21.472 -3.67 1 73.01 ? H42 PG4 502 A 1 HETATM 22 H H51 PG4 . . . C 3 2.852 21.747 -6.46 1 73.87 ? H51 PG4 502 A 1 HETATM 23 H H52 PG4 . . . C 3 1.446 22.591 -5.767 1 73.87 ? H52 PG4 502 A 1 HETATM 24 H H61 PG4 . . . C 3 2.249 23.67 -7.873 1 69.39 ? H61 PG4 502 A 1 HETATM 25 H H62 PG4 . . . C 3 2.371 24.761 -6.471 1 69.39 ? H62 PG4 502 A 1 HETATM 26 H H71 PG4 . . . C 3 3.834 25.087 -8.873 1 64.95 ? H71 PG4 502 A 1 HETATM 27 H H72 PG4 . . . C 3 4.046 26.037 -7.382 1 64.95 ? H72 PG4 502 A 1 HETATM 28 H H81 PG4 . . . C 3 6.015 26.005 -9.07 1 55.91 ? H81 PG4 502 A 1 HETATM 29 H H82 PG4 . . . C 3 6.396 25.689 -7.36 1 55.91 ? H82 PG4 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #