data_6IDJ
#
_model_server_result.job_id            r_5_AL6BMOaV0MkF3C_E3A 
_model_server_result.datetime_utc      '2024-11-28 04:16:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6idj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    6IDJ 
#
_exptl.entry_id    6IDJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6IDJ 
_cell.length_a            90.155 
_cell.length_b            90.155 
_cell.length_c            123.334 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6IDJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 134 n n 
N1 C10 FMN doub 135 n n 
C2 O2 FMN doub 136 n n 
C2 N3 FMN sing 137 n n 
N3 C4 FMN sing 138 n n 
N3 HN3 FMN sing 139 n n 
C4 O4 FMN doub 140 n n 
C4 C4A FMN sing 141 n n 
C4A N5 FMN doub 142 n n 
C4A C10 FMN sing 143 n n 
N5 C5A FMN sing 144 n n 
C5A C6 FMN doub 145 n y 
C5A C9A FMN sing 146 n y 
C6 C7 FMN sing 147 n y 
C6 H6 FMN sing 148 n n 
C7 C7M FMN sing 149 n n 
C7 C8 FMN doub 150 n y 
C7M HM71 FMN sing 151 n n 
C7M HM72 FMN sing 152 n n 
C7M HM73 FMN sing 153 n n 
C8 C8M FMN sing 154 n n 
C8 C9 FMN sing 155 n y 
C8M HM81 FMN sing 156 n n 
C8M HM82 FMN sing 157 n n 
C8M HM83 FMN sing 158 n n 
C9 C9A FMN doub 159 n y 
C9 H9 FMN sing 160 n n 
C9A N10 FMN sing 161 n n 
N10 C10 FMN sing 162 n n 
N10 C1' FMN sing 163 n n 
C1' C2' FMN sing 164 n n 
C1' "H1'1" FMN sing 165 n n 
C1' "H1'2" FMN sing 166 n n 
C2' O2' FMN sing 167 n n 
C2' C3' FMN sing 168 n n 
C2' H2' FMN sing 169 n n 
O2' HO2' FMN sing 170 n n 
C3' O3' FMN sing 171 n n 
C3' C4' FMN sing 172 n n 
C3' H3' FMN sing 173 n n 
O3' HO3' FMN sing 174 n n 
C4' O4' FMN sing 175 n n 
C4' C5' FMN sing 176 n n 
C4' H4' FMN sing 177 n n 
O4' HO4' FMN sing 178 n n 
C5' O5' FMN sing 179 n n 
C5' "H5'1" FMN sing 180 n n 
C5' "H5'2" FMN sing 181 n n 
O5' P FMN sing 182 n n 
P O1P FMN doub 183 n n 
P O2P FMN sing 184 n n 
P O3P FMN sing 185 n n 
O2P HOP2 FMN sing 186 n n 
O3P HOP3 FMN sing 187 n n 
#
_atom_sites.entry_id                     6IDJ 
_atom_sites.fract_transf_matrix[1][1]    0.011092 
_atom_sites.fract_transf_matrix[1][2]    0.006404 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012808 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008108 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 401 401 SO4 SO4 . 
C 3 ACT A 1 402 402 ACT ACT . 
D 3 ACT A 1 403 403 ACT ACT . 
E 4 FMN A 1 404 398 FMN FMN . 
F 5 ORO A 1 405 399 ORO ORO . 
G 6 9AU A 1 406 501 9AU DRG . 
H 2 SO4 A 1 407 1 SO4 SO4 . 
I 2 SO4 A 1 408 2 SO4 SO4 . 
J 3 ACT A 1 409 1 ACT ACT . 
K 7 HOH A 1 501 93 HOH HOH . 
K 7 HOH A 2 502 90 HOH HOH . 
K 7 HOH A 3 503 130 HOH HOH . 
K 7 HOH A 4 504 91 HOH HOH . 
K 7 HOH A 5 505 70 HOH HOH . 
K 7 HOH A 6 506 26 HOH HOH . 
K 7 HOH A 7 507 102 HOH HOH . 
K 7 HOH A 8 508 82 HOH HOH . 
K 7 HOH A 9 509 123 HOH HOH . 
K 7 HOH A 10 510 12 HOH HOH . 
K 7 HOH A 11 511 33 HOH HOH . 
K 7 HOH A 12 512 10 HOH HOH . 
K 7 HOH A 13 513 2 HOH HOH . 
K 7 HOH A 14 514 114 HOH HOH . 
K 7 HOH A 15 515 42 HOH HOH . 
K 7 HOH A 16 516 62 HOH HOH . 
K 7 HOH A 17 517 110 HOH HOH . 
K 7 HOH A 18 518 11 HOH HOH . 
K 7 HOH A 19 519 14 HOH HOH . 
K 7 HOH A 20 520 80 HOH HOH . 
K 7 HOH A 21 521 22 HOH HOH . 
K 7 HOH A 22 522 60 HOH HOH . 
K 7 HOH A 23 523 55 HOH HOH . 
K 7 HOH A 24 524 7 HOH HOH . 
K 7 HOH A 25 525 50 HOH HOH . 
K 7 HOH A 26 526 29 HOH HOH . 
K 7 HOH A 27 527 124 HOH HOH . 
K 7 HOH A 28 528 76 HOH HOH . 
K 7 HOH A 29 529 126 HOH HOH . 
K 7 HOH A 30 530 99 HOH HOH . 
K 7 HOH A 31 531 38 HOH HOH . 
K 7 HOH A 32 532 96 HOH HOH . 
K 7 HOH A 33 533 8 HOH HOH . 
K 7 HOH A 34 534 68 HOH HOH . 
K 7 HOH A 35 535 58 HOH HOH . 
K 7 HOH A 36 536 54 HOH HOH . 
K 7 HOH A 37 537 13 HOH HOH . 
K 7 HOH A 38 538 37 HOH HOH . 
K 7 HOH A 39 539 69 HOH HOH . 
K 7 HOH A 40 540 25 HOH HOH . 
K 7 HOH A 41 541 85 HOH HOH . 
K 7 HOH A 42 542 67 HOH HOH . 
K 7 HOH A 43 543 6 HOH HOH . 
K 7 HOH A 44 544 20 HOH HOH . 
K 7 HOH A 45 545 32 HOH HOH . 
K 7 HOH A 46 546 45 HOH HOH . 
K 7 HOH A 47 547 84 HOH HOH . 
K 7 HOH A 48 548 56 HOH HOH . 
K 7 HOH A 49 549 51 HOH HOH . 
K 7 HOH A 50 550 111 HOH HOH . 
K 7 HOH A 51 551 31 HOH HOH . 
K 7 HOH A 52 552 104 HOH HOH . 
K 7 HOH A 53 553 4 HOH HOH . 
K 7 HOH A 54 554 18 HOH HOH . 
K 7 HOH A 55 555 83 HOH HOH . 
K 7 HOH A 56 556 39 HOH HOH . 
K 7 HOH A 57 557 87 HOH HOH . 
K 7 HOH A 58 558 46 HOH HOH . 
K 7 HOH A 59 559 71 HOH HOH . 
K 7 HOH A 60 560 92 HOH HOH . 
K 7 HOH A 61 561 117 HOH HOH . 
K 7 HOH A 62 562 100 HOH HOH . 
K 7 HOH A 63 563 40 HOH HOH . 
K 7 HOH A 64 564 15 HOH HOH . 
K 7 HOH A 65 565 57 HOH HOH . 
K 7 HOH A 66 566 52 HOH HOH . 
K 7 HOH A 67 567 41 HOH HOH . 
K 7 HOH A 68 568 59 HOH HOH . 
K 7 HOH A 69 569 131 HOH HOH . 
K 7 HOH A 70 570 34 HOH HOH . 
K 7 HOH A 71 571 129 HOH HOH . 
K 7 HOH A 72 572 127 HOH HOH . 
K 7 HOH A 73 573 28 HOH HOH . 
K 7 HOH A 74 574 44 HOH HOH . 
K 7 HOH A 75 575 101 HOH HOH . 
K 7 HOH A 76 576 49 HOH HOH . 
K 7 HOH A 77 577 5 HOH HOH . 
K 7 HOH A 78 578 125 HOH HOH . 
K 7 HOH A 79 579 16 HOH HOH . 
K 7 HOH A 80 580 95 HOH HOH . 
K 7 HOH A 81 581 94 HOH HOH . 
K 7 HOH A 82 582 74 HOH HOH . 
K 7 HOH A 83 583 27 HOH HOH . 
K 7 HOH A 84 584 47 HOH HOH . 
K 7 HOH A 85 585 21 HOH HOH . 
K 7 HOH A 86 586 122 HOH HOH . 
K 7 HOH A 87 587 88 HOH HOH . 
K 7 HOH A 88 588 23 HOH HOH . 
K 7 HOH A 89 589 115 HOH HOH . 
K 7 HOH A 90 590 9 HOH HOH . 
K 7 HOH A 91 591 24 HOH HOH . 
K 7 HOH A 92 592 48 HOH HOH . 
K 7 HOH A 93 593 121 HOH HOH . 
K 7 HOH A 94 594 103 HOH HOH . 
K 7 HOH A 95 595 119 HOH HOH . 
K 7 HOH A 96 596 81 HOH HOH . 
K 7 HOH A 97 597 86 HOH HOH . 
K 7 HOH A 98 598 116 HOH HOH . 
K 7 HOH A 99 599 120 HOH HOH . 
K 7 HOH A 100 600 1 HOH HOH . 
K 7 HOH A 101 601 113 HOH HOH . 
K 7 HOH A 102 602 72 HOH HOH . 
K 7 HOH A 103 603 77 HOH HOH . 
K 7 HOH A 104 604 43 HOH HOH . 
K 7 HOH A 105 605 53 HOH HOH . 
K 7 HOH A 106 606 97 HOH HOH . 
K 7 HOH A 107 607 66 HOH HOH . 
K 7 HOH A 108 608 73 HOH HOH . 
K 7 HOH A 109 609 63 HOH HOH . 
K 7 HOH A 110 610 3 HOH HOH . 
K 7 HOH A 111 611 112 HOH HOH . 
K 7 HOH A 112 612 61 HOH HOH . 
K 7 HOH A 113 613 109 HOH HOH . 
K 7 HOH A 114 614 17 HOH HOH . 
K 7 HOH A 115 615 75 HOH HOH . 
K 7 HOH A 116 616 79 HOH HOH . 
K 7 HOH A 117 617 36 HOH HOH . 
K 7 HOH A 118 618 132 HOH HOH . 
K 7 HOH A 119 619 105 HOH HOH . 
K 7 HOH A 120 620 64 HOH HOH . 
K 7 HOH A 121 621 35 HOH HOH . 
K 7 HOH A 122 622 19 HOH HOH . 
K 7 HOH A 123 623 65 HOH HOH . 
K 7 HOH A 124 624 30 HOH HOH . 
K 7 HOH A 125 625 78 HOH HOH . 
K 7 HOH A 126 626 128 HOH HOH . 
K 7 HOH A 127 627 98 HOH HOH . 
K 7 HOH A 128 628 108 HOH HOH . 
K 7 HOH A 129 629 89 HOH HOH . 
K 7 HOH A 130 630 106 HOH HOH . 
K 7 HOH A 131 631 118 HOH HOH . 
K 7 HOH A 132 632 107 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . E 4 -38.372 17.98 11.757 1 17.64 ? N1 FMN 404 A 1 
HETATM 2 C C2 FMN . . . E 4 -38.719 18.701 10.659 1 19 ? C2 FMN 404 A 1 
HETATM 3 O O2 FMN . . . E 4 -38.92 18.096 9.576 1 18.96 ? O2 FMN 404 A 1 
HETATM 4 N N3 FMN . . . E 4 -38.868 20.054 10.71 1 18.91 ? N3 FMN 404 A 1 
HETATM 5 C C4 FMN . . . E 4 -38.671 20.795 11.802 1 18.39 ? C4 FMN 404 A 1 
HETATM 6 O O4 FMN . . . E 4 -38.799 22.06 11.796 1 17.91 ? O4 FMN 404 A 1 
HETATM 7 C C4A FMN . . . E 4 -38.292 20.098 13.03 1 17.42 ? C4A FMN 404 A 1 
HETATM 8 N N5 FMN . . . E 4 -38.093 20.78 14.2 1 19.29 ? N5 FMN 404 A 1 
HETATM 9 C C5A FMN . . . E 4 -37.687 20.111 15.316 1 17.96 ? C5A FMN 404 A 1 
HETATM 10 C C6 FMN . . . E 4 -37.44 20.796 16.504 1 19.53 ? C6 FMN 404 A 1 
HETATM 11 C C7 FMN . . . E 4 -37.036 20.111 17.639 1 19.78 ? C7 FMN 404 A 1 
HETATM 12 C C7M FMN . . . E 4 -36.76 20.869 18.914 1 21.26 ? C7M FMN 404 A 1 
HETATM 13 C C8 FMN . . . E 4 -36.841 18.64 17.584 1 18.95 ? C8 FMN 404 A 1 
HETATM 14 C C8M FMN . . . E 4 -36.399 17.833 18.77 1 20.05 ? C8M FMN 404 A 1 
HETATM 15 C C9 FMN . . . E 4 -37.097 17.975 16.42 1 18.47 ? C9 FMN 404 A 1 
HETATM 16 C C9A FMN . . . E 4 -37.505 18.639 15.27 1 18.46 ? C9A FMN 404 A 1 
HETATM 17 N N10 FMN . . . E 4 -37.75 17.921 14.061 1 17.9 ? N10 FMN 404 A 1 
HETATM 18 C C10 FMN . . . E 4 -38.137 18.625 12.926 1 17.75 ? C10 FMN 404 A 1 
HETATM 19 C C1' FMN . . . E 4 -37.615 16.482 13.971 1 16.51 ? C1' FMN 404 A 1 
HETATM 20 C C2' FMN . . . E 4 -36.188 16.05 13.752 1 16.96 ? C2' FMN 404 A 1 
HETATM 21 O O2' FMN . . . E 4 -35.775 16.542 12.476 1 17.06 ? O2' FMN 404 A 1 
HETATM 22 C C3' FMN . . . E 4 -36.116 14.523 13.823 1 17 ? C3' FMN 404 A 1 
HETATM 23 O O3' FMN . . . E 4 -36.968 14.001 12.786 1 16.86 ? O3' FMN 404 A 1 
HETATM 24 C C4' FMN . . . E 4 -36.584 13.939 15.172 1 16.61 ? C4' FMN 404 A 1 
HETATM 25 O O4' FMN . . . E 4 -36.277 14.8 16.271 1 17.04 ? O4' FMN 404 A 1 
HETATM 26 C C5' FMN . . . E 4 -35.978 12.573 15.45 1 17.2 ? C5' FMN 404 A 1 
HETATM 27 O O5' FMN . . . E 4 -34.561 12.663 15.537 1 17.17 ? O5' FMN 404 A 1 
HETATM 28 P P FMN . . . E 4 -33.754 12.725 16.941 1 18.5 ? P FMN 404 A 1 
HETATM 29 O O1P FMN . . . E 4 -34.011 14.121 17.439 1 18.33 ? O1P FMN 404 A 1 
HETATM 30 O O2P FMN . . . E 4 -32.33 12.477 16.551 1 17.13 ? O2P FMN 404 A 1 
HETATM 31 O O3P FMN . . . E 4 -34.377 11.641 17.802 1 17.92 ? O3P FMN 404 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#