data_6IEN # _model_server_result.job_id jZcbvMv8wwAKs67Q3mJxGg _model_server_result.datetime_utc '2024-12-01 12:12:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ien # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":502}' # _entry.id 6IEN # _exptl.entry_id 6IEN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IEN _cell.length_a 114.18 _cell.length_b 131.35 _cell.length_c 145.04 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IEN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 N N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 120 n n C1 C2 EDO sing 121 n n C1 H11 EDO sing 122 n n C1 H12 EDO sing 123 n n O1 HO1 EDO sing 124 n n C2 O2 EDO sing 125 n n C2 H21 EDO sing 126 n n C2 H22 EDO sing 127 n n O2 HO2 EDO sing 128 n n # _atom_sites.entry_id 6IEN _atom_sites.fract_transf_matrix[1][1] 0.008758 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007613 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006895 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 AS1 A 1 501 1 AS1 AS1 . F 3 FUM A 1 502 3 FUM FMR . G 4 EDO A 1 503 1 EDO EDO . H 5 PEG A 1 504 1 PEG PEG . I 2 AS1 B 1 501 1 AS1 AS1 . J 4 EDO B 1 502 2 EDO EDO . K 4 EDO B 1 503 3 EDO EDO . L 4 EDO B 1 504 5 EDO EDO . M 6 ARG C 1 501 3 ARG ARG . N 4 EDO C 1 502 4 EDO EDO . O 2 AS1 D 1 501 1 AS1 AS1 . P 7 HOH A 1 601 131 HOH HOH . P 7 HOH A 2 602 275 HOH HOH . P 7 HOH A 3 603 138 HOH HOH . P 7 HOH A 4 604 5 HOH HOH . P 7 HOH A 5 605 16 HOH HOH . P 7 HOH A 6 606 9 HOH HOH . P 7 HOH A 7 607 334 HOH HOH . P 7 HOH A 8 608 47 HOH HOH . P 7 HOH A 9 609 19 HOH HOH . P 7 HOH A 10 610 183 HOH HOH . P 7 HOH A 11 611 99 HOH HOH . P 7 HOH A 12 612 327 HOH HOH . P 7 HOH A 13 613 267 HOH HOH . P 7 HOH A 14 614 96 HOH HOH . P 7 HOH A 15 615 237 HOH HOH . P 7 HOH A 16 616 76 HOH HOH . P 7 HOH A 17 617 74 HOH HOH . P 7 HOH A 18 618 311 HOH HOH . P 7 HOH A 19 619 344 HOH HOH . P 7 HOH A 20 620 109 HOH HOH . P 7 HOH A 21 621 45 HOH HOH . P 7 HOH A 22 622 40 HOH HOH . P 7 HOH A 23 623 272 HOH HOH . P 7 HOH A 24 624 220 HOH HOH . P 7 HOH A 25 625 23 HOH HOH . P 7 HOH A 26 626 56 HOH HOH . P 7 HOH A 27 627 323 HOH HOH . P 7 HOH A 28 628 229 HOH HOH . P 7 HOH A 29 629 4 HOH HOH . P 7 HOH A 30 630 322 HOH HOH . P 7 HOH A 31 631 304 HOH HOH . P 7 HOH A 32 632 18 HOH HOH . P 7 HOH A 33 633 22 HOH HOH . P 7 HOH A 34 634 306 HOH HOH . P 7 HOH A 35 635 24 HOH HOH . P 7 HOH A 36 636 67 HOH HOH . P 7 HOH A 37 637 222 HOH HOH . P 7 HOH A 38 638 10 HOH HOH . P 7 HOH A 39 639 30 HOH HOH . P 7 HOH A 40 640 256 HOH HOH . P 7 HOH A 41 641 217 HOH HOH . P 7 HOH A 42 642 70 HOH HOH . P 7 HOH A 43 643 345 HOH HOH . P 7 HOH A 44 644 246 HOH HOH . P 7 HOH A 45 645 211 HOH HOH . P 7 HOH A 46 646 130 HOH HOH . P 7 HOH A 47 647 243 HOH HOH . P 7 HOH A 48 648 287 HOH HOH . P 7 HOH A 49 649 193 HOH HOH . P 7 HOH A 50 650 41 HOH HOH . P 7 HOH A 51 651 169 HOH HOH . P 7 HOH A 52 652 307 HOH HOH . P 7 HOH A 53 653 97 HOH HOH . P 7 HOH A 54 654 177 HOH HOH . P 7 HOH A 55 655 3 HOH HOH . P 7 HOH A 56 656 339 HOH HOH . P 7 HOH A 57 657 314 HOH HOH . P 7 HOH A 58 658 283 HOH HOH . P 7 HOH A 59 659 106 HOH HOH . P 7 HOH A 60 660 91 HOH HOH . P 7 HOH A 61 661 179 HOH HOH . P 7 HOH A 62 662 73 HOH HOH . P 7 HOH A 63 663 218 HOH HOH . P 7 HOH A 64 664 33 HOH HOH . P 7 HOH A 65 665 147 HOH HOH . P 7 HOH A 66 666 248 HOH HOH . P 7 HOH A 67 667 71 HOH HOH . P 7 HOH A 68 668 346 HOH HOH . P 7 HOH A 69 669 124 HOH HOH . P 7 HOH A 70 670 297 HOH HOH . P 7 HOH A 71 671 184 HOH HOH . P 7 HOH A 72 672 117 HOH HOH . P 7 HOH A 73 673 288 HOH HOH . P 7 HOH A 74 674 308 HOH HOH . P 7 HOH A 75 675 128 HOH HOH . P 7 HOH A 76 676 266 HOH HOH . P 7 HOH A 77 677 324 HOH HOH . P 7 HOH A 78 678 133 HOH HOH . P 7 HOH A 79 679 238 HOH HOH . P 7 HOH A 80 680 200 HOH HOH . P 7 HOH A 81 681 253 HOH HOH . P 7 HOH A 82 682 295 HOH HOH . P 7 HOH A 83 683 68 HOH HOH . P 7 HOH A 84 684 312 HOH HOH . P 7 HOH A 85 685 201 HOH HOH . P 7 HOH A 86 686 20 HOH HOH . P 7 HOH A 87 687 251 HOH HOH . P 7 HOH A 88 688 214 HOH HOH . P 7 HOH A 89 689 231 HOH HOH . P 7 HOH A 90 690 294 HOH HOH . P 7 HOH A 91 691 14 HOH HOH . P 7 HOH A 92 692 245 HOH HOH . P 7 HOH A 93 693 291 HOH HOH . Q 7 HOH B 1 601 95 HOH HOH . Q 7 HOH B 2 602 159 HOH HOH . Q 7 HOH B 3 603 146 HOH HOH . Q 7 HOH B 4 604 199 HOH HOH . Q 7 HOH B 5 605 36 HOH HOH . Q 7 HOH B 6 606 107 HOH HOH . Q 7 HOH B 7 607 21 HOH HOH . Q 7 HOH B 8 608 29 HOH HOH . Q 7 HOH B 9 609 6 HOH HOH . Q 7 HOH B 10 610 11 HOH HOH . Q 7 HOH B 11 611 119 HOH HOH . Q 7 HOH B 12 612 122 HOH HOH . Q 7 HOH B 13 613 282 HOH HOH . Q 7 HOH B 14 614 247 HOH HOH . Q 7 HOH B 15 615 93 HOH HOH . Q 7 HOH B 16 616 167 HOH HOH . Q 7 HOH B 17 617 81 HOH HOH . Q 7 HOH B 18 618 299 HOH HOH . Q 7 HOH B 19 619 123 HOH HOH . Q 7 HOH B 20 620 89 HOH HOH . Q 7 HOH B 21 621 148 HOH HOH . Q 7 HOH B 22 622 113 HOH HOH . Q 7 HOH B 23 623 321 HOH HOH . Q 7 HOH B 24 624 26 HOH HOH . Q 7 HOH B 25 625 44 HOH HOH . Q 7 HOH B 26 626 37 HOH HOH . Q 7 HOH B 27 627 171 HOH HOH . Q 7 HOH B 28 628 221 HOH HOH . Q 7 HOH B 29 629 196 HOH HOH . Q 7 HOH B 30 630 234 HOH HOH . Q 7 HOH B 31 631 34 HOH HOH . Q 7 HOH B 32 632 108 HOH HOH . Q 7 HOH B 33 633 241 HOH HOH . Q 7 HOH B 34 634 69 HOH HOH . Q 7 HOH B 35 635 151 HOH HOH . Q 7 HOH B 36 636 255 HOH HOH . Q 7 HOH B 37 637 116 HOH HOH . Q 7 HOH B 38 638 160 HOH HOH . Q 7 HOH B 39 639 318 HOH HOH . Q 7 HOH B 40 640 186 HOH HOH . Q 7 HOH B 41 641 72 HOH HOH . Q 7 HOH B 42 642 51 HOH HOH . Q 7 HOH B 43 643 261 HOH HOH . Q 7 HOH B 44 644 331 HOH HOH . Q 7 HOH B 45 645 150 HOH HOH . Q 7 HOH B 46 646 127 HOH HOH . Q 7 HOH B 47 647 139 HOH HOH . Q 7 HOH B 48 648 140 HOH HOH . Q 7 HOH B 49 649 132 HOH HOH . Q 7 HOH B 50 650 66 HOH HOH . Q 7 HOH B 51 651 277 HOH HOH . Q 7 HOH B 52 652 142 HOH HOH . Q 7 HOH B 53 653 162 HOH HOH . Q 7 HOH B 54 654 208 HOH HOH . Q 7 HOH B 55 655 227 HOH HOH . Q 7 HOH B 56 656 315 HOH HOH . Q 7 HOH B 57 657 328 HOH HOH . Q 7 HOH B 58 658 215 HOH HOH . Q 7 HOH B 59 659 100 HOH HOH . Q 7 HOH B 60 660 343 HOH HOH . Q 7 HOH B 61 661 125 HOH HOH . Q 7 HOH B 62 662 289 HOH HOH . Q 7 HOH B 63 663 300 HOH HOH . Q 7 HOH B 64 664 280 HOH HOH . Q 7 HOH B 65 665 84 HOH HOH . Q 7 HOH B 66 666 252 HOH HOH . Q 7 HOH B 67 667 48 HOH HOH . Q 7 HOH B 68 668 83 HOH HOH . Q 7 HOH B 69 669 219 HOH HOH . Q 7 HOH B 70 670 206 HOH HOH . Q 7 HOH B 71 671 236 HOH HOH . Q 7 HOH B 72 672 210 HOH HOH . Q 7 HOH B 73 673 340 HOH HOH . R 7 HOH C 1 601 88 HOH HOH . R 7 HOH C 2 602 198 HOH HOH . R 7 HOH C 3 603 61 HOH HOH . R 7 HOH C 4 604 216 HOH HOH . R 7 HOH C 5 605 63 HOH HOH . R 7 HOH C 6 606 260 HOH HOH . R 7 HOH C 7 607 111 HOH HOH . R 7 HOH C 8 608 104 HOH HOH . R 7 HOH C 9 609 230 HOH HOH . R 7 HOH C 10 610 202 HOH HOH . R 7 HOH C 11 611 102 HOH HOH . R 7 HOH C 12 612 176 HOH HOH . R 7 HOH C 13 613 233 HOH HOH . R 7 HOH C 14 614 279 HOH HOH . R 7 HOH C 15 615 92 HOH HOH . R 7 HOH C 16 616 163 HOH HOH . R 7 HOH C 17 617 112 HOH HOH . R 7 HOH C 18 618 120 HOH HOH . R 7 HOH C 19 619 15 HOH HOH . R 7 HOH C 20 620 156 HOH HOH . R 7 HOH C 21 621 17 HOH HOH . R 7 HOH C 22 622 232 HOH HOH . R 7 HOH C 23 623 25 HOH HOH . R 7 HOH C 24 624 59 HOH HOH . R 7 HOH C 25 625 115 HOH HOH . R 7 HOH C 26 626 13 HOH HOH . R 7 HOH C 27 627 60 HOH HOH . R 7 HOH C 28 628 149 HOH HOH . R 7 HOH C 29 629 269 HOH HOH . R 7 HOH C 30 630 85 HOH HOH . R 7 HOH C 31 631 43 HOH HOH . R 7 HOH C 32 632 332 HOH HOH . R 7 HOH C 33 633 189 HOH HOH . R 7 HOH C 34 634 188 HOH HOH . R 7 HOH C 35 635 54 HOH HOH . R 7 HOH C 36 636 157 HOH HOH . R 7 HOH C 37 637 172 HOH HOH . R 7 HOH C 38 638 316 HOH HOH . R 7 HOH C 39 639 341 HOH HOH . R 7 HOH C 40 640 75 HOH HOH . R 7 HOH C 41 641 32 HOH HOH . R 7 HOH C 42 642 7 HOH HOH . R 7 HOH C 43 643 110 HOH HOH . R 7 HOH C 44 644 347 HOH HOH . R 7 HOH C 45 645 190 HOH HOH . R 7 HOH C 46 646 257 HOH HOH . R 7 HOH C 47 647 80 HOH HOH . R 7 HOH C 48 648 195 HOH HOH . R 7 HOH C 49 649 136 HOH HOH . R 7 HOH C 50 650 173 HOH HOH . R 7 HOH C 51 651 342 HOH HOH . R 7 HOH C 52 652 46 HOH HOH . R 7 HOH C 53 653 276 HOH HOH . R 7 HOH C 54 654 239 HOH HOH . R 7 HOH C 55 655 204 HOH HOH . R 7 HOH C 56 656 155 HOH HOH . R 7 HOH C 57 657 317 HOH HOH . R 7 HOH C 58 658 284 HOH HOH . R 7 HOH C 59 659 213 HOH HOH . R 7 HOH C 60 660 254 HOH HOH . R 7 HOH C 61 661 212 HOH HOH . S 7 HOH D 1 601 53 HOH HOH . S 7 HOH D 2 602 101 HOH HOH . S 7 HOH D 3 603 178 HOH HOH . S 7 HOH D 4 604 79 HOH HOH . S 7 HOH D 5 605 49 HOH HOH . S 7 HOH D 6 606 180 HOH HOH . S 7 HOH D 7 607 87 HOH HOH . S 7 HOH D 8 608 52 HOH HOH . S 7 HOH D 9 609 168 HOH HOH . S 7 HOH D 10 610 158 HOH HOH . S 7 HOH D 11 611 293 HOH HOH . S 7 HOH D 12 612 310 HOH HOH . S 7 HOH D 13 613 240 HOH HOH . S 7 HOH D 14 614 205 HOH HOH . S 7 HOH D 15 615 303 HOH HOH . S 7 HOH D 16 616 228 HOH HOH . S 7 HOH D 17 617 181 HOH HOH . S 7 HOH D 18 618 268 HOH HOH . S 7 HOH D 19 619 103 HOH HOH . S 7 HOH D 20 620 64 HOH HOH . S 7 HOH D 21 621 235 HOH HOH . S 7 HOH D 22 622 35 HOH HOH . S 7 HOH D 23 623 86 HOH HOH . S 7 HOH D 24 624 78 HOH HOH . S 7 HOH D 25 625 2 HOH HOH . S 7 HOH D 26 626 27 HOH HOH . S 7 HOH D 27 627 175 HOH HOH . S 7 HOH D 28 628 118 HOH HOH . S 7 HOH D 29 629 264 HOH HOH . S 7 HOH D 30 630 197 HOH HOH . S 7 HOH D 31 631 319 HOH HOH . S 7 HOH D 32 632 58 HOH HOH . S 7 HOH D 33 633 298 HOH HOH . S 7 HOH D 34 634 296 HOH HOH . S 7 HOH D 35 635 203 HOH HOH . S 7 HOH D 36 636 50 HOH HOH . S 7 HOH D 37 637 105 HOH HOH . S 7 HOH D 38 638 166 HOH HOH . S 7 HOH D 39 639 94 HOH HOH . S 7 HOH D 40 640 134 HOH HOH . S 7 HOH D 41 641 145 HOH HOH . S 7 HOH D 42 642 121 HOH HOH . S 7 HOH D 43 643 129 HOH HOH . S 7 HOH D 44 644 174 HOH HOH . S 7 HOH D 45 645 313 HOH HOH . S 7 HOH D 46 646 137 HOH HOH . S 7 HOH D 47 647 170 HOH HOH . S 7 HOH D 48 648 290 HOH HOH . S 7 HOH D 49 649 226 HOH HOH . S 7 HOH D 50 650 90 HOH HOH . S 7 HOH D 51 651 242 HOH HOH . S 7 HOH D 52 652 330 HOH HOH . S 7 HOH D 53 653 273 HOH HOH . S 7 HOH D 54 654 164 HOH HOH . S 7 HOH D 55 655 185 HOH HOH . S 7 HOH D 56 656 305 HOH HOH . S 7 HOH D 57 657 336 HOH HOH . S 7 HOH D 58 658 141 HOH HOH . S 7 HOH D 59 659 152 HOH HOH . S 7 HOH D 60 660 262 HOH HOH . S 7 HOH D 61 661 65 HOH HOH . S 7 HOH D 62 662 182 HOH HOH . S 7 HOH D 63 663 333 HOH HOH . S 7 HOH D 64 664 39 HOH HOH . S 7 HOH D 65 665 320 HOH HOH . S 7 HOH D 66 666 309 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 4 53.359 67 -3.511 1 40.47 ? C1 EDO 502 B 1 HETATM 2 O O1 EDO . . . J 4 52.193 66.339 -4.016 1 41.03 ? O1 EDO 502 B 1 HETATM 3 C C2 EDO . . . J 4 53.087 67.5 -2.092 1 40.43 ? C2 EDO 502 B 1 HETATM 4 O O2 EDO . . . J 4 53.666 68.797 -1.862 1 39.57 ? O2 EDO 502 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 55 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #