data_6IFC # _model_server_result.job_id S99-9IEcRlgM2JGymQXQSg _model_server_result.datetime_utc '2024-11-14 18:50:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ifc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":201}' # _entry.id 6IFC # _exptl.entry_id 6IFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.12 _cell.angle_gamma 90 _cell.entry_id 6IFC _cell.length_a 53.956 _cell.length_b 114.942 _cell.length_c 53.998 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,M,N,O,P 1 1 E,F,G,H,K,L,Q,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 7 A ASP 7 1_555 I CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? metalc ? metalc2 A OD1 ASP 98 A ASP 98 1_555 I CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc3 C OD2 ASP 7 C ASP 7 1_555 J CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc4 C OD1 ASP 98 C ASP 98 1_555 J CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc5 E OD2 ASP 7 E ASP 7 1_555 K CA CA . E CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? metalc ? metalc6 K CA CA . E CA 201 1_555 Q O HOH . E HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc7 G OD2 ASP 7 G ASP 7 1_555 L CA CA . G CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? metalc ? metalc8 G OD1 ASP 98 G ASP 98 1_555 L CA CA . G CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6IFC _atom_sites.fract_transf_matrix[1][1] 0.018534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008299 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 4 CA A 1 201 1 CA CA . J 4 CA C 1 201 1 CA CA . K 4 CA E 1 201 1 CA CA . L 4 CA G 1 201 1 CA CA . M 5 HOH A 1 301 129 HOH HOH . M 5 HOH A 2 302 130 HOH HOH . M 5 HOH A 3 303 69 HOH HOH . M 5 HOH A 4 304 181 HOH HOH . M 5 HOH A 5 305 28 HOH HOH . M 5 HOH A 6 306 208 HOH HOH . M 5 HOH A 7 307 66 HOH HOH . M 5 HOH A 8 308 9 HOH HOH . M 5 HOH A 9 309 149 HOH HOH . M 5 HOH A 10 310 12 HOH HOH . M 5 HOH A 11 311 11 HOH HOH . M 5 HOH A 12 312 5 HOH HOH . M 5 HOH A 13 313 119 HOH HOH . M 5 HOH A 14 314 157 HOH HOH . M 5 HOH A 15 315 4 HOH HOH . M 5 HOH A 16 316 209 HOH HOH . M 5 HOH A 17 317 153 HOH HOH . M 5 HOH A 18 318 192 HOH HOH . M 5 HOH A 19 319 121 HOH HOH . M 5 HOH A 20 320 13 HOH HOH . M 5 HOH A 21 321 89 HOH HOH . M 5 HOH A 22 322 10 HOH HOH . M 5 HOH A 23 323 156 HOH HOH . M 5 HOH A 24 324 120 HOH HOH . M 5 HOH A 25 325 126 HOH HOH . M 5 HOH A 26 326 30 HOH HOH . M 5 HOH A 27 327 85 HOH HOH . M 5 HOH A 28 328 138 HOH HOH . M 5 HOH A 29 329 77 HOH HOH . M 5 HOH A 30 330 214 HOH HOH . M 5 HOH A 31 331 24 HOH HOH . M 5 HOH A 32 332 172 HOH HOH . M 5 HOH A 33 333 26 HOH HOH . M 5 HOH A 34 334 225 HOH HOH . M 5 HOH A 35 335 8 HOH HOH . M 5 HOH A 36 336 57 HOH HOH . M 5 HOH A 37 337 31 HOH HOH . M 5 HOH A 38 338 97 HOH HOH . M 5 HOH A 39 339 29 HOH HOH . M 5 HOH A 40 340 203 HOH HOH . M 5 HOH A 41 341 174 HOH HOH . M 5 HOH A 42 342 220 HOH HOH . M 5 HOH A 43 343 224 HOH HOH . M 5 HOH A 44 344 146 HOH HOH . M 5 HOH A 45 345 201 HOH HOH . M 5 HOH A 46 346 88 HOH HOH . M 5 HOH A 47 347 222 HOH HOH . M 5 HOH A 48 348 1 HOH HOH . M 5 HOH A 49 349 223 HOH HOH . M 5 HOH A 50 350 221 HOH HOH . N 5 HOH B 1 101 116 HOH HOH . N 5 HOH B 2 102 2 HOH HOH . N 5 HOH B 3 103 110 HOH HOH . N 5 HOH B 4 104 212 HOH HOH . N 5 HOH B 5 105 6 HOH HOH . N 5 HOH B 6 106 167 HOH HOH . O 5 HOH C 1 301 147 HOH HOH . O 5 HOH C 2 302 25 HOH HOH . O 5 HOH C 3 303 198 HOH HOH . O 5 HOH C 4 304 137 HOH HOH . O 5 HOH C 5 305 79 HOH HOH . O 5 HOH C 6 306 27 HOH HOH . O 5 HOH C 7 307 183 HOH HOH . O 5 HOH C 8 308 75 HOH HOH . O 5 HOH C 9 309 3 HOH HOH . O 5 HOH C 10 310 70 HOH HOH . O 5 HOH C 11 311 34 HOH HOH . O 5 HOH C 12 312 105 HOH HOH . O 5 HOH C 13 313 38 HOH HOH . O 5 HOH C 14 314 100 HOH HOH . O 5 HOH C 15 315 16 HOH HOH . O 5 HOH C 16 316 218 HOH HOH . O 5 HOH C 17 317 7 HOH HOH . O 5 HOH C 18 318 36 HOH HOH . O 5 HOH C 19 319 95 HOH HOH . O 5 HOH C 20 320 111 HOH HOH . O 5 HOH C 21 321 107 HOH HOH . O 5 HOH C 22 322 132 HOH HOH . O 5 HOH C 23 323 136 HOH HOH . O 5 HOH C 24 324 197 HOH HOH . O 5 HOH C 25 325 67 HOH HOH . O 5 HOH C 26 326 59 HOH HOH . O 5 HOH C 27 327 91 HOH HOH . O 5 HOH C 28 328 15 HOH HOH . O 5 HOH C 29 329 23 HOH HOH . O 5 HOH C 30 330 21 HOH HOH . O 5 HOH C 31 331 164 HOH HOH . O 5 HOH C 32 332 33 HOH HOH . O 5 HOH C 33 333 42 HOH HOH . O 5 HOH C 34 334 165 HOH HOH . O 5 HOH C 35 335 184 HOH HOH . O 5 HOH C 36 336 78 HOH HOH . O 5 HOH C 37 337 73 HOH HOH . O 5 HOH C 38 338 106 HOH HOH . O 5 HOH C 39 339 39 HOH HOH . O 5 HOH C 40 340 37 HOH HOH . O 5 HOH C 41 341 178 HOH HOH . O 5 HOH C 42 342 195 HOH HOH . O 5 HOH C 43 343 74 HOH HOH . O 5 HOH C 44 344 98 HOH HOH . O 5 HOH C 45 345 40 HOH HOH . O 5 HOH C 46 346 82 HOH HOH . O 5 HOH C 47 347 207 HOH HOH . O 5 HOH C 48 348 128 HOH HOH . O 5 HOH C 49 349 17 HOH HOH . O 5 HOH C 50 350 32 HOH HOH . O 5 HOH C 51 351 189 HOH HOH . O 5 HOH C 52 352 227 HOH HOH . O 5 HOH C 53 353 145 HOH HOH . O 5 HOH C 54 354 117 HOH HOH . P 5 HOH D 1 101 160 HOH HOH . P 5 HOH D 2 102 142 HOH HOH . P 5 HOH D 3 103 228 HOH HOH . P 5 HOH D 4 104 92 HOH HOH . P 5 HOH D 5 105 196 HOH HOH . P 5 HOH D 6 106 90 HOH HOH . P 5 HOH D 7 107 35 HOH HOH . P 5 HOH D 8 108 41 HOH HOH . P 5 HOH D 9 109 215 HOH HOH . P 5 HOH D 10 110 139 HOH HOH . P 5 HOH D 11 111 80 HOH HOH . P 5 HOH D 12 112 99 HOH HOH . P 5 HOH D 13 113 43 HOH HOH . P 5 HOH D 14 114 193 HOH HOH . P 5 HOH D 15 115 211 HOH HOH . Q 5 HOH E 1 301 144 HOH HOH . Q 5 HOH E 2 302 45 HOH HOH . Q 5 HOH E 3 303 108 HOH HOH . Q 5 HOH E 4 304 206 HOH HOH . Q 5 HOH E 5 305 81 HOH HOH . Q 5 HOH E 6 306 200 HOH HOH . Q 5 HOH E 7 307 96 HOH HOH . Q 5 HOH E 8 308 143 HOH HOH . Q 5 HOH E 9 309 19 HOH HOH . Q 5 HOH E 10 310 20 HOH HOH . Q 5 HOH E 11 311 199 HOH HOH . Q 5 HOH E 12 312 14 HOH HOH . Q 5 HOH E 13 313 68 HOH HOH . Q 5 HOH E 14 314 71 HOH HOH . Q 5 HOH E 15 315 47 HOH HOH . Q 5 HOH E 16 316 94 HOH HOH . Q 5 HOH E 17 317 49 HOH HOH . Q 5 HOH E 18 318 86 HOH HOH . Q 5 HOH E 19 319 102 HOH HOH . Q 5 HOH E 20 320 18 HOH HOH . Q 5 HOH E 21 321 155 HOH HOH . Q 5 HOH E 22 322 114 HOH HOH . Q 5 HOH E 23 323 133 HOH HOH . Q 5 HOH E 24 324 152 HOH HOH . Q 5 HOH E 25 325 44 HOH HOH . Q 5 HOH E 26 326 61 HOH HOH . Q 5 HOH E 27 327 162 HOH HOH . Q 5 HOH E 28 328 125 HOH HOH . Q 5 HOH E 29 329 217 HOH HOH . Q 5 HOH E 30 330 226 HOH HOH . Q 5 HOH E 31 331 103 HOH HOH . Q 5 HOH E 32 332 190 HOH HOH . Q 5 HOH E 33 333 210 HOH HOH . Q 5 HOH E 34 334 168 HOH HOH . R 5 HOH F 1 101 46 HOH HOH . S 5 HOH G 1 301 154 HOH HOH . S 5 HOH G 2 302 51 HOH HOH . S 5 HOH G 3 303 58 HOH HOH . S 5 HOH G 4 304 48 HOH HOH . S 5 HOH G 5 305 173 HOH HOH . S 5 HOH G 6 306 204 HOH HOH . S 5 HOH G 7 307 65 HOH HOH . S 5 HOH G 8 308 52 HOH HOH . S 5 HOH G 9 309 171 HOH HOH . S 5 HOH G 10 310 64 HOH HOH . S 5 HOH G 11 311 62 HOH HOH . S 5 HOH G 12 312 76 HOH HOH . S 5 HOH G 13 313 60 HOH HOH . S 5 HOH G 14 314 185 HOH HOH . S 5 HOH G 15 315 118 HOH HOH . S 5 HOH G 16 316 113 HOH HOH . S 5 HOH G 17 317 170 HOH HOH . S 5 HOH G 18 318 123 HOH HOH . S 5 HOH G 19 319 131 HOH HOH . S 5 HOH G 20 320 109 HOH HOH . S 5 HOH G 21 321 22 HOH HOH . S 5 HOH G 22 322 87 HOH HOH . S 5 HOH G 23 323 187 HOH HOH . S 5 HOH G 24 324 56 HOH HOH . S 5 HOH G 25 325 84 HOH HOH . S 5 HOH G 26 326 83 HOH HOH . S 5 HOH G 27 327 63 HOH HOH . S 5 HOH G 28 328 72 HOH HOH . S 5 HOH G 29 329 115 HOH HOH . S 5 HOH G 30 330 148 HOH HOH . S 5 HOH G 31 331 175 HOH HOH . S 5 HOH G 32 332 93 HOH HOH . S 5 HOH G 33 333 169 HOH HOH . S 5 HOH G 34 334 151 HOH HOH . S 5 HOH G 35 335 161 HOH HOH . T 5 HOH H 1 101 124 HOH HOH . T 5 HOH H 2 102 127 HOH HOH . T 5 HOH H 3 103 140 HOH HOH . T 5 HOH H 4 104 216 HOH HOH . T 5 HOH H 5 105 55 HOH HOH . T 5 HOH H 6 106 50 HOH HOH . T 5 HOH H 7 107 150 HOH HOH . T 5 HOH H 8 108 163 HOH HOH . T 5 HOH H 9 109 219 HOH HOH . T 5 HOH H 10 110 122 HOH HOH . T 5 HOH H 11 111 177 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 4 _atom_site.Cartn_x -35.005 _atom_site.Cartn_y 0.962 _atom_site.Cartn_z 19.755 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #