data_6IGX # _model_server_result.job_id CfmJwimvi78pvv7upeZcAw _model_server_result.datetime_utc '2025-03-06 20:53:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6igx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 6IGX # _exptl.entry_id 6IGX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.47 _cell.angle_gamma 90 _cell.entry_id 6IGX _cell.length_a 122.433 _cell.length_b 61.998 _cell.length_c 130.885 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IGX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F 1 1 C,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 6IGX _atom_sites.fract_transf_matrix[1][1] 0.008168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000496 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01613 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 EPE D 1 1001 1 EPE EPE . F 4 HOH B 1 1001 2 HOH HOH . F 4 HOH B 2 1002 6 HOH HOH . F 4 HOH B 3 1003 8 HOH HOH . F 4 HOH B 4 1004 5 HOH HOH . G 4 HOH D 1 1101 9 HOH HOH . G 4 HOH D 2 1102 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . E 3 356.732 38.059 432.977 1 89.81 ? N1 EPE 1001 D 1 HETATM 2 C C2 EPE . . . E 3 357.45 39.104 433.724 1 89.24 ? C2 EPE 1001 D 1 HETATM 3 C C3 EPE . . . E 3 356.929 39.13 435.157 1 77.5 ? C3 EPE 1001 D 1 HETATM 4 N N4 EPE . . . E 3 355.521 38.781 435.179 1 88.58 ? N4 EPE 1001 D 1 HETATM 5 C C5 EPE . . . E 3 354.797 39.188 433.995 1 104.04 ? C5 EPE 1001 D 1 HETATM 6 C C6 EPE . . . E 3 355.323 38.441 432.774 1 99.23 ? C6 EPE 1001 D 1 HETATM 7 C C7 EPE . . . E 3 355.101 37.526 435.784 1 86.49 ? C7 EPE 1001 D 1 HETATM 8 C C8 EPE . . . E 3 353.954 37.703 436.774 1 76.41 ? C8 EPE 1001 D 1 HETATM 9 O O8 EPE . . . E 3 353.668 36.464 437.383 1 64.1 ? O8 EPE 1001 D 1 HETATM 10 C C9 EPE . . . E 3 357.368 37.825 431.671 1 96.62 ? C9 EPE 1001 D 1 HETATM 11 C C10 EPE . . . E 3 358.544 36.865 431.825 1 106.03 ? C10 EPE 1001 D 1 HETATM 12 S S EPE . . . E 3 359.012 36.048 430.277 1 132.26 ? S EPE 1001 D 1 HETATM 13 O O1S EPE . . . E 3 360.346 36.494 429.882 1 124.61 ? O1S EPE 1001 D 1 HETATM 14 O O2S EPE . . . E 3 358.061 36.385 429.222 1 118.91 ? O2S EPE 1001 D 1 HETATM 15 O O3S EPE . . . E 3 359.028 34.601 430.477 1 121.42 ? O3S EPE 1001 D 1 HETATM 16 H H21 EPE . . . E 3 357.289 40.074 433.254 1 107.09 ? H21 EPE 1001 D 1 HETATM 17 H H22 EPE . . . E 3 358.52 38.895 433.722 1 107.09 ? H22 EPE 1001 D 1 HETATM 18 H H31 EPE . . . E 3 357.068 40.124 435.58 1 93 ? H31 EPE 1001 D 1 HETATM 19 H H32 EPE . . . E 3 357.492 38.421 435.765 1 93 ? H32 EPE 1001 D 1 HETATM 20 H H51 EPE . . . E 3 354.913 40.261 433.846 1 124.85 ? H51 EPE 1001 D 1 HETATM 21 H H52 EPE . . . E 3 353.736 38.977 434.125 1 124.85 ? H52 EPE 1001 D 1 HETATM 22 H H61 EPE . . . E 3 355.239 39.077 431.892 1 119.08 ? H61 EPE 1001 D 1 HETATM 23 H H62 EPE . . . E 3 354.722 37.548 432.604 1 119.08 ? H62 EPE 1001 D 1 HETATM 24 H H71 EPE . . . E 3 355.95 37.077 436.3 1 103.79 ? H71 EPE 1001 D 1 HETATM 25 H H72 EPE . . . E 3 354.791 36.837 434.999 1 103.79 ? H72 EPE 1001 D 1 HETATM 26 H H81 EPE . . . E 3 353.07 38.071 436.253 1 91.69 ? H81 EPE 1001 D 1 HETATM 27 H H82 EPE . . . E 3 354.231 38.433 437.534 1 91.69 ? H82 EPE 1001 D 1 HETATM 28 H HO8 EPE . . . E 3 354.272 35.779 437.029 1 76.92 ? HO8 EPE 1001 D 1 HETATM 29 H H91 EPE . . . E 3 356.639 37.403 430.979 1 115.94 ? H91 EPE 1001 D 1 HETATM 30 H H92 EPE . . . E 3 357.718 38.771 431.259 1 115.94 ? H92 EPE 1001 D 1 HETATM 31 H H101 EPE . . . E 3 359.403 37.416 432.208 1 127.24 ? H101 EPE 1001 D 1 HETATM 32 H H102 EPE . . . E 3 358.288 36.105 432.563 1 127.24 ? H102 EPE 1001 D 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #