data_6IHE # _model_server_result.job_id 1FrBE5EMZG_IR88CiooUtw _model_server_result.datetime_utc '2024-10-19 15:34:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ihe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 6IHE # _exptl.entry_id 6IHE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6IHE _cell.length_a 134.194 _cell.length_b 134.194 _cell.length_c 81.94 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IHE _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 27.313333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 O N N ? 5 P N N ? 5 Q N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 381 n n C1 C2 PGE sing 382 n n C1 H1 PGE sing 383 n n C1 H12 PGE sing 384 n n O1 HO1 PGE sing 385 n n C2 O2 PGE sing 386 n n C2 H2 PGE sing 387 n n C2 H22 PGE sing 388 n n O2 C3 PGE sing 389 n n C3 C4 PGE sing 390 n n C3 H3 PGE sing 391 n n C3 H32 PGE sing 392 n n C4 O3 PGE sing 393 n n C4 H4 PGE sing 394 n n C4 H42 PGE sing 395 n n O4 C6 PGE sing 396 n n O4 HO4 PGE sing 397 n n C6 C5 PGE sing 398 n n C6 H6 PGE sing 399 n n C6 H62 PGE sing 400 n n C5 O3 PGE sing 401 n n C5 H5 PGE sing 402 n n C5 H52 PGE sing 403 n n # _atom_sites.entry_id 6IHE _atom_sites.fract_transf_matrix[1][1] 0.007452 _atom_sites.fract_transf_matrix[1][2] 0.004302 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008605 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 401 1 NAD NAD . D 3 MLT A 1 402 1 MLT MLT . E 4 GOL A 1 403 3 GOL GOL . F 5 PGE A 1 404 9 PGE PGE . G 5 PGE A 1 405 12 PGE PGE . H 6 EDO A 1 406 5 EDO EDO . I 7 PG4 A 1 407 1 PG4 PG4 . J 7 PG4 A 1 408 2 PG4 PG4 . K 8 PEG A 1 409 2 PEG PEG . L 2 NAD B 1 401 2 NAD NAD . M 3 MLT B 1 402 2 MLT MLT . N 4 GOL B 1 403 1 GOL GOL . O 5 PGE B 1 404 2 PGE PGE . P 5 PGE B 1 405 10 PGE PGE . Q 5 PGE B 1 406 11 PGE PGE . R 6 EDO B 1 407 1 EDO EDO . S 6 EDO B 1 408 4 EDO EDO . T 6 EDO B 1 409 6 EDO EDO . U 8 PEG B 1 410 4 PEG PEG . V 9 HOH A 1 501 236 HOH HOH . V 9 HOH A 2 502 207 HOH HOH . V 9 HOH A 3 503 232 HOH HOH . V 9 HOH A 4 504 115 HOH HOH . V 9 HOH A 5 505 47 HOH HOH . V 9 HOH A 6 506 100 HOH HOH . V 9 HOH A 7 507 359 HOH HOH . V 9 HOH A 8 508 256 HOH HOH . V 9 HOH A 9 509 203 HOH HOH . V 9 HOH A 10 510 253 HOH HOH . V 9 HOH A 11 511 32 HOH HOH . V 9 HOH A 12 512 81 HOH HOH . V 9 HOH A 13 513 85 HOH HOH . V 9 HOH A 14 514 233 HOH HOH . V 9 HOH A 15 515 237 HOH HOH . V 9 HOH A 16 516 64 HOH HOH . V 9 HOH A 17 517 98 HOH HOH . V 9 HOH A 18 518 259 HOH HOH . V 9 HOH A 19 519 69 HOH HOH . V 9 HOH A 20 520 181 HOH HOH . V 9 HOH A 21 521 330 HOH HOH . V 9 HOH A 22 522 4 HOH HOH . V 9 HOH A 23 523 27 HOH HOH . V 9 HOH A 24 524 251 HOH HOH . V 9 HOH A 25 525 255 HOH HOH . V 9 HOH A 26 526 184 HOH HOH . V 9 HOH A 27 527 37 HOH HOH . V 9 HOH A 28 528 42 HOH HOH . V 9 HOH A 29 529 63 HOH HOH . V 9 HOH A 30 530 312 HOH HOH . V 9 HOH A 31 531 105 HOH HOH . V 9 HOH A 32 532 116 HOH HOH . V 9 HOH A 33 533 354 HOH HOH . V 9 HOH A 34 534 107 HOH HOH . V 9 HOH A 35 535 33 HOH HOH . V 9 HOH A 36 536 286 HOH HOH . V 9 HOH A 37 537 38 HOH HOH . V 9 HOH A 38 538 15 HOH HOH . V 9 HOH A 39 539 35 HOH HOH . V 9 HOH A 40 540 168 HOH HOH . V 9 HOH A 41 541 261 HOH HOH . V 9 HOH A 42 542 152 HOH HOH . V 9 HOH A 43 543 180 HOH HOH . V 9 HOH A 44 544 52 HOH HOH . V 9 HOH A 45 545 99 HOH HOH . V 9 HOH A 46 546 102 HOH HOH . V 9 HOH A 47 547 65 HOH HOH . V 9 HOH A 48 548 125 HOH HOH . V 9 HOH A 49 549 111 HOH HOH . V 9 HOH A 50 550 79 HOH HOH . V 9 HOH A 51 551 70 HOH HOH . V 9 HOH A 52 552 18 HOH HOH . V 9 HOH A 53 553 231 HOH HOH . V 9 HOH A 54 554 23 HOH HOH . V 9 HOH A 55 555 258 HOH HOH . V 9 HOH A 56 556 24 HOH HOH . V 9 HOH A 57 557 332 HOH HOH . V 9 HOH A 58 558 6 HOH HOH . V 9 HOH A 59 559 8 HOH HOH . V 9 HOH A 60 560 230 HOH HOH . V 9 HOH A 61 561 53 HOH HOH . V 9 HOH A 62 562 190 HOH HOH . V 9 HOH A 63 563 44 HOH HOH . V 9 HOH A 64 564 97 HOH HOH . V 9 HOH A 65 565 206 HOH HOH . V 9 HOH A 66 566 344 HOH HOH . V 9 HOH A 67 567 13 HOH HOH . V 9 HOH A 68 568 182 HOH HOH . V 9 HOH A 69 569 36 HOH HOH . V 9 HOH A 70 570 59 HOH HOH . V 9 HOH A 71 571 7 HOH HOH . V 9 HOH A 72 572 307 HOH HOH . V 9 HOH A 73 573 89 HOH HOH . V 9 HOH A 74 574 327 HOH HOH . V 9 HOH A 75 575 77 HOH HOH . V 9 HOH A 76 576 331 HOH HOH . V 9 HOH A 77 577 172 HOH HOH . V 9 HOH A 78 578 355 HOH HOH . V 9 HOH A 79 579 11 HOH HOH . V 9 HOH A 80 580 323 HOH HOH . V 9 HOH A 81 581 311 HOH HOH . V 9 HOH A 82 582 303 HOH HOH . V 9 HOH A 83 583 335 HOH HOH . V 9 HOH A 84 584 361 HOH HOH . V 9 HOH A 85 585 325 HOH HOH . V 9 HOH A 86 586 328 HOH HOH . V 9 HOH A 87 587 263 HOH HOH . V 9 HOH A 88 588 254 HOH HOH . V 9 HOH A 89 589 322 HOH HOH . V 9 HOH A 90 590 248 HOH HOH . V 9 HOH A 91 591 178 HOH HOH . V 9 HOH A 92 592 202 HOH HOH . V 9 HOH A 93 593 301 HOH HOH . V 9 HOH A 94 594 205 HOH HOH . V 9 HOH A 95 595 225 HOH HOH . V 9 HOH A 96 596 257 HOH HOH . V 9 HOH A 97 597 179 HOH HOH . V 9 HOH A 98 598 285 HOH HOH . V 9 HOH A 99 599 329 HOH HOH . V 9 HOH A 100 600 235 HOH HOH . V 9 HOH A 101 601 250 HOH HOH . V 9 HOH A 102 602 204 HOH HOH . V 9 HOH A 103 603 284 HOH HOH . V 9 HOH A 104 604 264 HOH HOH . V 9 HOH A 105 605 308 HOH HOH . V 9 HOH A 106 606 186 HOH HOH . V 9 HOH A 107 607 177 HOH HOH . V 9 HOH A 108 608 185 HOH HOH . V 9 HOH A 109 609 154 HOH HOH . V 9 HOH A 110 610 208 HOH HOH . V 9 HOH A 111 611 249 HOH HOH . V 9 HOH A 112 612 234 HOH HOH . W 9 HOH B 1 501 350 HOH HOH . W 9 HOH B 2 502 289 HOH HOH . W 9 HOH B 3 503 315 HOH HOH . W 9 HOH B 4 504 316 HOH HOH . W 9 HOH B 5 505 60 HOH HOH . W 9 HOH B 6 506 240 HOH HOH . W 9 HOH B 7 507 71 HOH HOH . W 9 HOH B 8 508 224 HOH HOH . W 9 HOH B 9 509 198 HOH HOH . W 9 HOH B 10 510 192 HOH HOH . W 9 HOH B 11 511 199 HOH HOH . W 9 HOH B 12 512 94 HOH HOH . W 9 HOH B 13 513 74 HOH HOH . W 9 HOH B 14 514 21 HOH HOH . W 9 HOH B 15 515 314 HOH HOH . W 9 HOH B 16 516 34 HOH HOH . W 9 HOH B 17 517 25 HOH HOH . W 9 HOH B 18 518 62 HOH HOH . W 9 HOH B 19 519 16 HOH HOH . W 9 HOH B 20 520 358 HOH HOH . W 9 HOH B 21 521 46 HOH HOH . W 9 HOH B 22 522 265 HOH HOH . W 9 HOH B 23 523 317 HOH HOH . W 9 HOH B 24 524 119 HOH HOH . W 9 HOH B 25 525 112 HOH HOH . W 9 HOH B 26 526 82 HOH HOH . W 9 HOH B 27 527 169 HOH HOH . W 9 HOH B 28 528 244 HOH HOH . W 9 HOH B 29 529 26 HOH HOH . W 9 HOH B 30 530 245 HOH HOH . W 9 HOH B 31 531 41 HOH HOH . W 9 HOH B 32 532 173 HOH HOH . W 9 HOH B 33 533 29 HOH HOH . W 9 HOH B 34 534 45 HOH HOH . W 9 HOH B 35 535 160 HOH HOH . W 9 HOH B 36 536 30 HOH HOH . W 9 HOH B 37 537 50 HOH HOH . W 9 HOH B 38 538 88 HOH HOH . W 9 HOH B 39 539 31 HOH HOH . W 9 HOH B 40 540 61 HOH HOH . W 9 HOH B 41 541 19 HOH HOH . W 9 HOH B 42 542 109 HOH HOH . W 9 HOH B 43 543 73 HOH HOH . W 9 HOH B 44 544 9 HOH HOH . W 9 HOH B 45 545 3 HOH HOH . W 9 HOH B 46 546 28 HOH HOH . W 9 HOH B 47 547 39 HOH HOH . W 9 HOH B 48 548 271 HOH HOH . W 9 HOH B 49 549 40 HOH HOH . W 9 HOH B 50 550 275 HOH HOH . W 9 HOH B 51 551 161 HOH HOH . W 9 HOH B 52 552 75 HOH HOH . W 9 HOH B 53 553 96 HOH HOH . W 9 HOH B 54 554 22 HOH HOH . W 9 HOH B 55 555 108 HOH HOH . W 9 HOH B 56 556 215 HOH HOH . W 9 HOH B 57 557 72 HOH HOH . W 9 HOH B 58 558 166 HOH HOH . W 9 HOH B 59 559 2 HOH HOH . W 9 HOH B 60 560 272 HOH HOH . W 9 HOH B 61 561 17 HOH HOH . W 9 HOH B 62 562 90 HOH HOH . W 9 HOH B 63 563 51 HOH HOH . W 9 HOH B 64 564 57 HOH HOH . W 9 HOH B 65 565 334 HOH HOH . W 9 HOH B 66 566 67 HOH HOH . W 9 HOH B 67 567 48 HOH HOH . W 9 HOH B 68 568 110 HOH HOH . W 9 HOH B 69 569 336 HOH HOH . W 9 HOH B 70 570 54 HOH HOH . W 9 HOH B 71 571 304 HOH HOH . W 9 HOH B 72 572 1 HOH HOH . W 9 HOH B 73 573 66 HOH HOH . W 9 HOH B 74 574 320 HOH HOH . W 9 HOH B 75 575 349 HOH HOH . W 9 HOH B 76 576 76 HOH HOH . W 9 HOH B 77 577 297 HOH HOH . W 9 HOH B 78 578 58 HOH HOH . W 9 HOH B 79 579 279 HOH HOH . W 9 HOH B 80 580 12 HOH HOH . W 9 HOH B 81 581 83 HOH HOH . W 9 HOH B 82 582 295 HOH HOH . W 9 HOH B 83 583 273 HOH HOH . W 9 HOH B 84 584 120 HOH HOH . W 9 HOH B 85 585 267 HOH HOH . W 9 HOH B 86 586 269 HOH HOH . W 9 HOH B 87 587 300 HOH HOH . W 9 HOH B 88 588 345 HOH HOH . W 9 HOH B 89 589 219 HOH HOH . W 9 HOH B 90 590 155 HOH HOH . W 9 HOH B 91 591 221 HOH HOH . W 9 HOH B 92 592 296 HOH HOH . W 9 HOH B 93 593 274 HOH HOH . W 9 HOH B 94 594 153 HOH HOH . W 9 HOH B 95 595 158 HOH HOH . W 9 HOH B 96 596 310 HOH HOH . W 9 HOH B 97 597 339 HOH HOH . W 9 HOH B 98 598 302 HOH HOH . W 9 HOH B 99 599 292 HOH HOH . W 9 HOH B 100 600 159 HOH HOH . W 9 HOH B 101 601 241 HOH HOH . W 9 HOH B 102 602 319 HOH HOH . W 9 HOH B 103 603 356 HOH HOH . W 9 HOH B 104 604 188 HOH HOH . W 9 HOH B 105 605 268 HOH HOH . W 9 HOH B 106 606 321 HOH HOH . W 9 HOH B 107 607 220 HOH HOH . W 9 HOH B 108 608 278 HOH HOH . W 9 HOH B 109 609 326 HOH HOH . W 9 HOH B 110 610 226 HOH HOH . W 9 HOH B 111 611 222 HOH HOH . W 9 HOH B 112 612 162 HOH HOH . W 9 HOH B 113 613 290 HOH HOH . W 9 HOH B 114 614 347 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . F 5 -48.115 50.641 5.635 1 69.04 ? C1 PGE 404 A 1 HETATM 2 O O1 PGE . . . F 5 -48.163 51.921 4.975 1 67.03 ? O1 PGE 404 A 1 HETATM 3 C C2 PGE . . . F 5 -48.554 50.774 7.08 1 67.57 ? C2 PGE 404 A 1 HETATM 4 O O2 PGE . . . F 5 -47.619 51.595 7.769 1 72.09 ? O2 PGE 404 A 1 HETATM 5 C C3 PGE . . . F 5 -47.939 52.998 7.822 1 78.68 ? C3 PGE 404 A 1 HETATM 6 C C4 PGE . . . F 5 -46.955 53.698 8.746 1 79.13 ? C4 PGE 404 A 1 HETATM 7 O O4 PGE . . . F 5 -42.531 53.945 9.674 1 65.35 ? O4 PGE 404 A 1 HETATM 8 C C6 PGE . . . F 5 -43.426 54.45 8.673 1 68.84 ? C6 PGE 404 A 1 HETATM 9 C C5 PGE . . . F 5 -44.539 53.426 8.439 1 71.94 ? C5 PGE 404 A 1 HETATM 10 O O3 PGE . . . F 5 -45.772 54.028 8.003 1 79.26 ? O3 PGE 404 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #