data_6IIU # _model_server_result.job_id uADE5tEMTi5mYddqRQkRCg _model_server_result.datetime_utc '2024-11-04 22:54:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iiu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":9004}' # _entry.id 6IIU # _exptl.entry_id 6IIU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IIU _cell.length_a 81.16 _cell.length_b 155.08 _cell.length_c 128.13 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IIU _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 118 A CYS 11 1_555 A SG CYS 209 A CYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 212 A CYS 105 1_555 A SG CYS 290 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc1 A SG CYS 341 A CYS 2006 1_555 C ZN ZN . A ZN 9002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc2 A SG CYS 344 A CYS 2009 1_555 C ZN ZN . A ZN 9002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc3 A SG CYS 374 A CYS 2039 1_555 C ZN ZN . A ZN 9002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc4 A SG CYS 377 A CYS 2042 1_555 C ZN ZN . A ZN 9002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 380 n n C10 C9 OLC doub 381 n n C10 C11 OLC sing 382 n n C9 C8 OLC sing 383 n n C17 C16 OLC sing 384 z n C11 C12 OLC sing 385 n n C8 C7 OLC sing 386 n n C24 C22 OLC sing 387 n n C24 O25 OLC sing 388 n n C16 C15 OLC sing 389 n n C12 C13 OLC sing 390 n n C7 C6 OLC sing 391 n n C15 C14 OLC sing 392 n n C13 C14 OLC sing 393 n n C6 C5 OLC sing 394 n n C5 C4 OLC sing 395 n n C4 C3 OLC sing 396 n n C3 C2 OLC sing 397 n n C2 C1 OLC sing 398 n n C21 C22 OLC sing 399 n n C21 O20 OLC sing 400 n n C1 O19 OLC doub 401 n n C1 O20 OLC sing 402 n n C22 O23 OLC sing 403 n n C18 H18 OLC sing 404 n n C18 H18A OLC sing 405 n n C18 H18B OLC sing 406 n n C10 H10 OLC sing 407 n n C9 H9 OLC sing 408 n n C17 H17 OLC sing 409 n n C17 H17A OLC sing 410 n n C11 H11 OLC sing 411 n n C11 H11A OLC sing 412 n n C8 H8 OLC sing 413 n n C8 H8A OLC sing 414 n n C24 H24 OLC sing 415 n n C24 H24A OLC sing 416 n n C16 H16 OLC sing 417 n n C16 H16A OLC sing 418 n n C12 H12 OLC sing 419 n n C12 H12A OLC sing 420 n n C7 H7 OLC sing 421 n n C7 H7A OLC sing 422 n n C15 H15 OLC sing 423 n n C15 H15A OLC sing 424 n n C13 H13 OLC sing 425 n n C13 H13A OLC sing 426 n n C6 H6 OLC sing 427 n n C6 H6A OLC sing 428 n n C14 H14 OLC sing 429 n n C14 H14A OLC sing 430 n n C5 H5 OLC sing 431 n n C5 H5A OLC sing 432 n n C4 H4 OLC sing 433 n n C4 H4A OLC sing 434 n n C3 H3 OLC sing 435 n n C3 H3A OLC sing 436 n n C2 H2 OLC sing 437 n n C2 H2A OLC sing 438 n n C21 H21 OLC sing 439 n n C21 H21A OLC sing 440 n n C22 H22 OLC sing 441 n n O25 HO25 OLC sing 442 n n O23 HO23 OLC sing 443 n n # _atom_sites.entry_id 6IIU _atom_sites.fract_transf_matrix[1][1] 0.012321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007805 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A8X A 1 9001 9001 A8X DUG . C 3 ZN A 1 9002 1 ZN ZN . D 4 CLR A 1 9003 2 CLR CLR . E 5 OLC A 1 9004 3 OLC OLC . F 5 OLC A 1 9005 5 OLC OLC . G 6 GOL A 1 9006 6 GOL GOL . H 7 HOH A 1 9101 6 HOH HOH . H 7 HOH A 2 9102 3 HOH HOH . H 7 HOH A 3 9103 1 HOH HOH . H 7 HOH A 4 9104 8 HOH HOH . H 7 HOH A 5 9105 5 HOH HOH . H 7 HOH A 6 9106 11 HOH HOH . H 7 HOH A 7 9107 4 HOH HOH . H 7 HOH A 8 9108 10 HOH HOH . H 7 HOH A 9 9109 9 HOH HOH . H 7 HOH A 10 9110 2 HOH HOH . H 7 HOH A 11 9111 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C24 OLC . . . E 5 24.366 171.538 130.693 1 95.64 ? C24 OLC 9004 A 1 HETATM 2 C C6 OLC . . . E 5 25.076 160.774 132.499 1 88.36 ? C6 OLC 9004 A 1 HETATM 3 C C5 OLC . . . E 5 25.194 161.869 131.429 1 88.31 ? C5 OLC 9004 A 1 HETATM 4 C C4 OLC . . . E 5 24.963 163.247 132.058 1 88.43 ? C4 OLC 9004 A 1 HETATM 5 C C3 OLC . . . E 5 24.222 164.167 131.075 1 90.14 ? C3 OLC 9004 A 1 HETATM 6 C C2 OLC . . . E 5 24.958 165.52 130.972 1 92.37 ? C2 OLC 9004 A 1 HETATM 7 C C21 OLC . . . E 5 24.359 169.031 130.96 1 93.21 ? C21 OLC 9004 A 1 HETATM 8 C C1 OLC . . . E 5 24.009 166.712 130.741 1 93.24 ? C1 OLC 9004 A 1 HETATM 9 C C22 OLC . . . E 5 24.959 170.218 130.204 1 93.93 ? C22 OLC 9004 A 1 HETATM 10 O O19 OLC . . . E 5 22.805 166.625 130.985 1 94.76 ? O19 OLC 9004 A 1 HETATM 11 O O25 OLC . . . E 5 24.665 172.614 129.794 1 96.72 ? O25 OLC 9004 A 1 HETATM 12 O O23 OLC . . . E 5 26.382 170.232 130.324 1 93.91 ? O23 OLC 9004 A 1 HETATM 13 O O20 OLC . . . E 5 24.603 167.825 130.213 1 92.79 ? O20 OLC 9004 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #