data_6IJ7
#
_model_server_result.job_id            XBl823nJ1Psnq2seXth4Sw 
_model_server_result.datetime_utc      '2025-07-15 12:32:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ij7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    6IJ7 
#
_exptl.entry_id    6IJ7 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6IJ7 
_cell.length_a            80.647 
_cell.length_b            80.647 
_cell.length_c            340.192 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6IJ7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,N 1 1 
B,J,K,L,M,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 J N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 138 n n 
C1 C2 GOL sing 139 n n 
C1 H11 GOL sing 140 n n 
C1 H12 GOL sing 141 n n 
O1 HO1 GOL sing 142 n n 
C2 O2 GOL sing 143 n n 
C2 C3 GOL sing 144 n n 
C2 H2 GOL sing 145 n n 
O2 HO2 GOL sing 146 n n 
C3 O3 GOL sing 147 n n 
C3 H31 GOL sing 148 n n 
C3 H32 GOL sing 149 n n 
O3 HO3 GOL sing 150 n n 
#
_atom_sites.entry_id                     6IJ7 
_atom_sites.fract_transf_matrix[1][1]    0.0124 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0124 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00294 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 501 2 GOL GOL . 
D 2 GOL A 1 502 3 GOL GOL . 
E 2 GOL A 1 503 4 GOL GOL . 
F 3 EDO A 1 504 1 EDO EDO . 
G 3 EDO A 1 505 2 EDO EDO . 
H 3 EDO A 1 506 4 EDO EDO . 
I 3 EDO A 1 507 6 EDO EDO . 
J 2 GOL B 1 501 1 GOL GOL . 
K 3 EDO B 1 502 3 EDO EDO . 
L 3 EDO B 1 503 5 EDO EDO . 
M 3 EDO B 1 504 7 EDO EDO . 
N 4 HOH A 1 601 31 HOH HOH . 
N 4 HOH A 2 602 35 HOH HOH . 
N 4 HOH A 3 603 27 HOH HOH . 
N 4 HOH A 4 604 28 HOH HOH . 
N 4 HOH A 5 605 9 HOH HOH . 
N 4 HOH A 6 606 17 HOH HOH . 
N 4 HOH A 7 607 34 HOH HOH . 
N 4 HOH A 8 608 7 HOH HOH . 
N 4 HOH A 9 609 10 HOH HOH . 
N 4 HOH A 10 610 26 HOH HOH . 
N 4 HOH A 11 611 3 HOH HOH . 
N 4 HOH A 12 612 32 HOH HOH . 
N 4 HOH A 13 613 4 HOH HOH . 
N 4 HOH A 14 614 2 HOH HOH . 
N 4 HOH A 15 615 5 HOH HOH . 
N 4 HOH A 16 616 30 HOH HOH . 
N 4 HOH A 17 617 33 HOH HOH . 
O 4 HOH B 1 601 20 HOH HOH . 
O 4 HOH B 2 602 16 HOH HOH . 
O 4 HOH B 3 603 21 HOH HOH . 
O 4 HOH B 4 604 23 HOH HOH . 
O 4 HOH B 5 605 11 HOH HOH . 
O 4 HOH B 6 606 22 HOH HOH . 
O 4 HOH B 7 607 18 HOH HOH . 
O 4 HOH B 8 608 8 HOH HOH . 
O 4 HOH B 9 609 25 HOH HOH . 
O 4 HOH B 10 610 12 HOH HOH . 
O 4 HOH B 11 611 1 HOH HOH . 
O 4 HOH B 12 612 15 HOH HOH . 
O 4 HOH B 13 613 13 HOH HOH . 
O 4 HOH B 14 614 29 HOH HOH . 
O 4 HOH B 15 615 6 HOH HOH . 
O 4 HOH B 16 616 14 HOH HOH . 
O 4 HOH B 17 617 19 HOH HOH . 
O 4 HOH B 18 618 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 21.764 6.248 0.442 1 57.97 ? C1 GOL 501 A 1 
HETATM 2 O O1 GOL . . . C 2 20.471 6.279 -0.091 1 58.26 ? O1 GOL 501 A 1 
HETATM 3 C C2 GOL . . . C 2 22.083 4.802 0.683 1 57.22 ? C2 GOL 501 A 1 
HETATM 4 O O2 GOL . . . C 2 21.877 4.242 -0.583 1 56.41 ? O2 GOL 501 A 1 
HETATM 5 C C3 GOL . . . C 2 23.549 4.683 1.101 1 57.06 ? C3 GOL 501 A 1 
HETATM 6 O O3 GOL . . . C 2 23.997 3.337 1.241 1 56.44 ? O3 GOL 501 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#