data_6IJD # _model_server_result.job_id HIbIoLaiofnW3fGXRr-mFA _model_server_result.datetime_utc '2025-07-16 09:30:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ijd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":900}' # _entry.id 6IJD # _exptl.entry_id 6IJD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.236 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,5,7,3',4'-PENTAHYDROXYFLAVONE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IJD _cell.length_a 81.1 _cell.length_b 81.1 _cell.length_c 341.46 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IJD _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C15 H10 O7' _chem_comp.formula_weight 302.236 _chem_comp.id QUE _chem_comp.mon_nstd_flag . _chem_comp.name "3,5,7,3',4'-PENTAHYDROXYFLAVONE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms QUERCETIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 QUE doub 277 n y C1 C6 QUE sing 278 n y C1 H1 QUE sing 279 n n C2 C3 QUE sing 280 n y C2 O30 QUE sing 281 n n C3 C4 QUE doub 282 n y C3 C9 QUE sing 283 n y C4 C5 QUE sing 284 n y C4 O12 QUE sing 285 n y C5 C6 QUE doub 286 n y C5 H5 QUE sing 287 n n C6 O29 QUE sing 288 n n C9 C10 QUE sing 289 n y C9 O13 QUE doub 290 n n C10 C11 QUE doub 291 n y C10 O27 QUE sing 292 n n C11 C14 QUE sing 293 n y C11 O12 QUE sing 294 n y C14 C15 QUE doub 295 n y C14 C19 QUE sing 296 n y C15 C16 QUE sing 297 n y C15 H15 QUE sing 298 n n C16 C17 QUE doub 299 n y C16 H16 QUE sing 300 n n C17 C18 QUE sing 301 n y C17 O24 QUE sing 302 n n C18 C19 QUE doub 303 n y C18 O23 QUE sing 304 n n C19 H19 QUE sing 305 n n O23 HO3 QUE sing 306 n n O24 HO4 QUE sing 307 n n O27 HO7 QUE sing 308 n n O29 HO9 QUE sing 309 n n O30 HO0 QUE sing 310 n n # _atom_sites.entry_id 6IJD _atom_sites.fract_transf_matrix[1][1] 0.01233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002929 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QUE A 1 900 900 QUE QUE . D 2 QUE B 1 900 900 QUE QUE . E 3 HOH A 1 1001 6 HOH HOH . E 3 HOH A 2 1002 8 HOH HOH . E 3 HOH A 3 1003 22 HOH HOH . E 3 HOH A 4 1004 1 HOH HOH . E 3 HOH A 5 1005 17 HOH HOH . E 3 HOH A 6 1006 7 HOH HOH . E 3 HOH A 7 1007 4 HOH HOH . E 3 HOH A 8 1008 2 HOH HOH . E 3 HOH A 9 1009 14 HOH HOH . E 3 HOH A 10 1010 18 HOH HOH . E 3 HOH A 11 1011 15 HOH HOH . E 3 HOH A 12 1012 19 HOH HOH . F 3 HOH B 1 1001 5 HOH HOH . F 3 HOH B 2 1002 3 HOH HOH . F 3 HOH B 3 1003 24 HOH HOH . F 3 HOH B 4 1004 20 HOH HOH . F 3 HOH B 5 1005 23 HOH HOH . F 3 HOH B 6 1006 13 HOH HOH . F 3 HOH B 7 1007 16 HOH HOH . F 3 HOH B 8 1008 12 HOH HOH . F 3 HOH B 9 1009 10 HOH HOH . F 3 HOH B 10 1010 11 HOH HOH . F 3 HOH B 11 1011 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 QUE . . . C 2 28.854 77.535 0.847 1 38.34 ? C1 QUE 900 A 1 HETATM 2 C C2 QUE . . . C 2 29.86 77.698 -0.109 1 38.62 ? C2 QUE 900 A 1 HETATM 3 C C3 QUE . . . C 2 31.062 78.356 0.202 1 39.1 ? C3 QUE 900 A 1 HETATM 4 C C4 QUE . . . C 2 31.211 78.828 1.459 1 39.27 ? C4 QUE 900 A 1 HETATM 5 C C5 QUE . . . C 2 30.193 78.672 2.457 1 38.9 ? C5 QUE 900 A 1 HETATM 6 C C6 QUE . . . C 2 28.999 78.021 2.154 1 38.45 ? C6 QUE 900 A 1 HETATM 7 C C9 QUE . . . C 2 32.148 78.527 -0.777 1 39.51 ? C9 QUE 900 A 1 HETATM 8 C C10 QUE . . . C 2 33.338 79.205 -0.367 1 40.19 ? C10 QUE 900 A 1 HETATM 9 C C11 QUE . . . C 2 33.42 79.622 0.969 1 40.38 ? C11 QUE 900 A 1 HETATM 10 C C14 QUE . . . C 2 34.51 80.464 1.575 1 41.28 ? C14 QUE 900 A 1 HETATM 11 C C15 QUE . . . C 2 34.769 81.652 0.864 1 42 ? C15 QUE 900 A 1 HETATM 12 C C16 QUE . . . C 2 35.675 82.599 1.327 1 43.06 ? C16 QUE 900 A 1 HETATM 13 C C17 QUE . . . C 2 36.311 82.37 2.563 1 43.34 ? C17 QUE 900 A 1 HETATM 14 C C18 QUE . . . C 2 35.988 81.186 3.293 1 42.54 ? C18 QUE 900 A 1 HETATM 15 C C19 QUE . . . C 2 35.077 80.239 2.817 1 41.52 ? C19 QUE 900 A 1 HETATM 16 O O12 QUE . . . C 2 32.372 79.457 1.781 1 39.9 ? O12 QUE 900 A 1 HETATM 17 O O13 QUE . . . C 2 32.055 78.051 -2.087 1 39.36 ? O13 QUE 900 A 1 HETATM 18 O O23 QUE . . . C 2 36.595 80.933 4.536 1 42.93 ? O23 QUE 900 A 1 HETATM 19 O O24 QUE . . . C 2 37.258 83.343 3.039 1 44.58 ? O24 QUE 900 A 1 HETATM 20 O O27 QUE . . . C 2 34.379 79.41 -1.282 1 40.72 ? O27 QUE 900 A 1 HETATM 21 O O29 QUE . . . C 2 27.962 77.872 3.131 1 38.2 ? O29 QUE 900 A 1 HETATM 22 O O30 QUE . . . C 2 29.718 77.212 -1.412 1 38.5 ? O30 QUE 900 A 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #