data_6IMA
#
_model_server_result.job_id            NX9h8Jl4DnMnW7d46GK7Sw 
_model_server_result.datetime_utc      '2024-10-19 23:41:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ima 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    6IMA 
#
_exptl.entry_id    6IMA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.89 
_cell.angle_gamma         90 
_cell.entry_id            6IMA 
_cell.length_a            203.064 
_cell.length_b            56.062 
_cell.length_c            105.664 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6IMA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E 1 1 
B,F 2 1 
C,G 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C HIS 100 A HIS 134 1_555 A N MSE 101 A MSE 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C MSE 101 A MSE 135 1_555 A N THR 102 A THR 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C ALA 233 A ALA 267 1_555 A N MSE 234 A MSE 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C MSE 234 A MSE 268 1_555 A N PHE 235 A PHE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 A C PHE 235 A PHE 269 1_555 A N MSE 236 A MSE 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 A C MSE 236 A MSE 270 1_555 A N HIS 237 A HIS 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale7 A C ILE 241 A ILE 275 1_555 A N MSE 242 A MSE 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale8 A C MSE 242 A MSE 276 1_555 A N VAL 243 A VAL 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale9 A C VAL 243 A VAL 277 1_555 A N MSE 244 A MSE 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale10 A C MSE 244 A MSE 278 1_555 A N SER 245 A SER 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale11 A C ASN 306 A ASN 340 1_555 A N MSE 307 A MSE 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale12 A C MSE 307 A MSE 341 1_555 A N THR 308 A THR 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale13 B C HIS 100 B HIS 134 1_555 B N MSE 101 B MSE 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale14 B C MSE 101 B MSE 135 1_555 B N THR 102 B THR 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale15 B C ALA 233 B ALA 267 1_555 B N MSE 234 B MSE 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale16 B C MSE 234 B MSE 268 1_555 B N PHE 235 B PHE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale17 B C PHE 235 B PHE 269 1_555 B N MSE 236 B MSE 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale18 B C MSE 236 B MSE 270 1_555 B N HIS 237 B HIS 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale19 B C ILE 241 B ILE 275 1_555 B N MSE 242 B MSE 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale20 B C MSE 242 B MSE 276 1_555 B N VAL 243 B VAL 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale21 B C VAL 243 B VAL 277 1_555 B N MSE 244 B MSE 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale22 B C MSE 244 B MSE 278 1_555 B N SER 245 B SER 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale23 B C ASN 306 B ASN 340 1_555 B N MSE 307 B MSE 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale24 B C MSE 307 B MSE 341 1_555 B N THR 308 B THR 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale25 C C HIS 100 C HIS 134 1_555 C N MSE 101 C MSE 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale26 C C MSE 101 C MSE 135 1_555 C N THR 102 C THR 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale27 C C ALA 233 C ALA 267 1_555 C N MSE 234 C MSE 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale28 C C MSE 234 C MSE 268 1_555 C N PHE 235 C PHE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale29 C C PHE 235 C PHE 269 1_555 C N MSE 236 C MSE 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale30 C C MSE 236 C MSE 270 1_555 C N HIS 237 C HIS 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale31 C C ILE 241 C ILE 275 1_555 C N MSE 242 C MSE 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale32 C C MSE 242 C MSE 276 1_555 C N VAL 243 C VAL 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale33 C C VAL 243 C VAL 277 1_555 C N MSE 244 C MSE 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale34 C C MSE 244 C MSE 278 1_555 C N SER 245 C SER 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale35 C C ASN 306 C ASN 340 1_555 C N MSE 307 C MSE 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale36 C C MSE 307 C MSE 341 1_555 C N THR 308 C THR 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6IMA 
_atom_sites.fract_transf_matrix[1][1]    0.004925 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002606 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017837 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010707 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 CIT A 1 401 1 CIT CIT . 
E 3 HOH A 1 501 49 HOH HOH . 
E 3 HOH A 2 502 58 HOH HOH . 
E 3 HOH A 3 503 25 HOH HOH . 
E 3 HOH A 4 504 12 HOH HOH . 
E 3 HOH A 5 505 17 HOH HOH . 
E 3 HOH A 6 506 20 HOH HOH . 
E 3 HOH A 7 507 55 HOH HOH . 
E 3 HOH A 8 508 5 HOH HOH . 
E 3 HOH A 9 509 15 HOH HOH . 
E 3 HOH A 10 510 82 HOH HOH . 
E 3 HOH A 11 511 14 HOH HOH . 
E 3 HOH A 12 512 26 HOH HOH . 
E 3 HOH A 13 513 86 HOH HOH . 
E 3 HOH A 14 514 13 HOH HOH . 
E 3 HOH A 15 515 7 HOH HOH . 
E 3 HOH A 16 516 54 HOH HOH . 
E 3 HOH A 17 517 43 HOH HOH . 
E 3 HOH A 18 518 22 HOH HOH . 
E 3 HOH A 19 519 23 HOH HOH . 
E 3 HOH A 20 520 6 HOH HOH . 
E 3 HOH A 21 521 66 HOH HOH . 
E 3 HOH A 22 522 1 HOH HOH . 
E 3 HOH A 23 523 3 HOH HOH . 
E 3 HOH A 24 524 38 HOH HOH . 
E 3 HOH A 25 525 90 HOH HOH . 
E 3 HOH A 26 526 11 HOH HOH . 
E 3 HOH A 27 527 56 HOH HOH . 
E 3 HOH A 28 528 65 HOH HOH . 
E 3 HOH A 29 529 50 HOH HOH . 
E 3 HOH A 30 530 52 HOH HOH . 
E 3 HOH A 31 531 98 HOH HOH . 
E 3 HOH A 32 532 42 HOH HOH . 
E 3 HOH A 33 533 8 HOH HOH . 
E 3 HOH A 34 534 28 HOH HOH . 
E 3 HOH A 35 535 48 HOH HOH . 
E 3 HOH A 36 536 19 HOH HOH . 
E 3 HOH A 37 537 29 HOH HOH . 
E 3 HOH A 38 538 16 HOH HOH . 
E 3 HOH A 39 539 39 HOH HOH . 
E 3 HOH A 40 540 103 HOH HOH . 
E 3 HOH A 41 541 32 HOH HOH . 
E 3 HOH A 42 542 63 HOH HOH . 
E 3 HOH A 43 543 44 HOH HOH . 
E 3 HOH A 44 544 59 HOH HOH . 
E 3 HOH A 45 545 40 HOH HOH . 
E 3 HOH A 46 546 70 HOH HOH . 
E 3 HOH A 47 547 80 HOH HOH . 
E 3 HOH A 48 548 74 HOH HOH . 
E 3 HOH A 49 549 46 HOH HOH . 
E 3 HOH A 50 550 35 HOH HOH . 
E 3 HOH A 51 551 30 HOH HOH . 
E 3 HOH A 52 552 60 HOH HOH . 
E 3 HOH A 53 553 96 HOH HOH . 
E 3 HOH A 54 554 69 HOH HOH . 
E 3 HOH A 55 555 51 HOH HOH . 
E 3 HOH A 56 556 95 HOH HOH . 
E 3 HOH A 57 557 27 HOH HOH . 
E 3 HOH A 58 558 93 HOH HOH . 
F 3 HOH B 1 401 104 HOH HOH . 
F 3 HOH B 2 402 21 HOH HOH . 
F 3 HOH B 3 403 76 HOH HOH . 
F 3 HOH B 4 404 72 HOH HOH . 
F 3 HOH B 5 405 101 HOH HOH . 
F 3 HOH B 6 406 75 HOH HOH . 
F 3 HOH B 7 407 91 HOH HOH . 
F 3 HOH B 8 408 100 HOH HOH . 
F 3 HOH B 9 409 9 HOH HOH . 
F 3 HOH B 10 410 81 HOH HOH . 
F 3 HOH B 11 411 88 HOH HOH . 
F 3 HOH B 12 412 53 HOH HOH . 
F 3 HOH B 13 413 4 HOH HOH . 
F 3 HOH B 14 414 73 HOH HOH . 
F 3 HOH B 15 415 61 HOH HOH . 
F 3 HOH B 16 416 92 HOH HOH . 
F 3 HOH B 17 417 87 HOH HOH . 
F 3 HOH B 18 418 102 HOH HOH . 
F 3 HOH B 19 419 94 HOH HOH . 
F 3 HOH B 20 420 99 HOH HOH . 
F 3 HOH B 21 421 68 HOH HOH . 
G 3 HOH C 1 401 10 HOH HOH . 
G 3 HOH C 2 402 84 HOH HOH . 
G 3 HOH C 3 403 62 HOH HOH . 
G 3 HOH C 4 404 31 HOH HOH . 
G 3 HOH C 5 405 41 HOH HOH . 
G 3 HOH C 6 406 45 HOH HOH . 
G 3 HOH C 7 407 83 HOH HOH . 
G 3 HOH C 8 408 77 HOH HOH . 
G 3 HOH C 9 409 33 HOH HOH . 
G 3 HOH C 10 410 34 HOH HOH . 
G 3 HOH C 11 411 18 HOH HOH . 
G 3 HOH C 12 412 78 HOH HOH . 
G 3 HOH C 13 413 47 HOH HOH . 
G 3 HOH C 14 414 36 HOH HOH . 
G 3 HOH C 15 415 89 HOH HOH . 
G 3 HOH C 16 416 37 HOH HOH . 
G 3 HOH C 17 417 71 HOH HOH . 
G 3 HOH C 18 418 97 HOH HOH . 
G 3 HOH C 19 419 2 HOH HOH . 
G 3 HOH C 20 420 57 HOH HOH . 
G 3 HOH C 21 421 85 HOH HOH . 
G 3 HOH C 22 422 79 HOH HOH . 
G 3 HOH C 23 423 64 HOH HOH . 
G 3 HOH C 24 424 24 HOH HOH . 
G 3 HOH C 25 425 67 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . D 2 -2.552 13.374 8.657 1 64.54 ? C1 CIT 401 A 1 
HETATM 2 O O1 CIT . . . D 2 -3.226 13.788 7.685 1 64.46 ? O1 CIT 401 A 1 
HETATM 3 O O2 CIT . . . D 2 -3.075 13.375 9.795 1 65.54 ? O2 CIT 401 A 1 
HETATM 4 C C2 CIT . . . D 2 -1.142 12.848 8.482 1 54.19 ? C2 CIT 401 A 1 
HETATM 5 C C3 CIT . . . D 2 -0.107 13.92 8.144 1 51.63 ? C3 CIT 401 A 1 
HETATM 6 O O7 CIT . . . D 2 0.047 14.776 9.305 1 51.37 ? O7 CIT 401 A 1 
HETATM 7 C C4 CIT . . . D 2 1.232 13.275 7.809 1 42.5 ? C4 CIT 401 A 1 
HETATM 8 C C5 CIT . . . D 2 1.559 12.262 8.877 1 46.46 ? C5 CIT 401 A 1 
HETATM 9 O O3 CIT . . . D 2 1.667 11.054 8.586 1 50.55 ? O3 CIT 401 A 1 
HETATM 10 O O4 CIT . . . D 2 1.722 12.613 10.067 1 48.26 ? O4 CIT 401 A 1 
HETATM 11 C C6 CIT . . . D 2 -0.536 14.792 6.976 1 55.19 ? C6 CIT 401 A 1 
HETATM 12 O O5 CIT . . . D 2 -0.185 14.491 5.812 1 60.48 ? O5 CIT 401 A 1 
HETATM 13 O O6 CIT . . . D 2 -1.245 15.804 7.161 1 55.26 ? O6 CIT 401 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           13 
#