data_6IN1 # _model_server_result.job_id TNim2K8l2VsI12yM9sKX9w _model_server_result.datetime_utc '2024-10-19 03:35:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6in1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 6IN1 # _exptl.entry_id 6IN1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.437 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IN1 _cell.length_a 38.633 _cell.length_b 44.896 _cell.length_c 78.251 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IN1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O TYR 104 A TYR 137 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc2 A O ILE 105 A ILE 138 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc3 A O ASN 107 A ASN 140 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc4 A OE1 GLU 130 A GLU 163 1_555 D NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc5 A OE2 GLU 130 A GLU 163 1_555 D NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc6 D NA NA . A NA 202 1_555 E O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? # _chem_comp.formula 'C22 H25 N O6' _chem_comp.formula_weight 399.437 _chem_comp.id LOC _chem_comp.mon_nstd_flag . _chem_comp.name N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms COLCHICINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C12 LOC doub 194 n n C12 C13 LOC sing 195 n n C12 N1 LOC sing 196 n n N1 C11 LOC sing 197 n n C11 C14 LOC sing 198 n n C11 C10 LOC sing 199 n n C14 C15 LOC doub 200 n n C14 C21 LOC sing 201 n n C15 C16 LOC sing 202 n n C10 C9 LOC sing 203 n n C9 C8 LOC sing 204 n n C8 C7 LOC doub 205 n y C8 C22 LOC sing 206 n y C7 C5 LOC sing 207 n y C5 C3 LOC doub 208 n y C5 O3 LOC sing 209 n n C3 C1 LOC sing 210 n y C3 O2 LOC sing 211 n n C1 O1 LOC sing 212 n n C1 C22 LOC doub 213 n y O1 C2 LOC sing 214 n n O2 C4 LOC sing 215 n n O3 C6 LOC sing 216 n n C22 C21 LOC sing 217 n n C21 C20 LOC doub 218 n n C20 C19 LOC sing 219 n n C19 C17 LOC doub 220 n n C17 C16 LOC sing 221 n n C17 O6 LOC sing 222 n n C16 O5 LOC doub 223 n n O6 C18 LOC sing 224 n n C13 H13 LOC sing 225 n n C13 H13A LOC sing 226 n n C13 H13B LOC sing 227 n n N1 HN1 LOC sing 228 n n C11 H11 LOC sing 229 n n C15 H15 LOC sing 230 n n C10 H10 LOC sing 231 n n C10 H10A LOC sing 232 n n C9 H9 LOC sing 233 n n C9 H9A LOC sing 234 n n C7 H7 LOC sing 235 n n C2 H2 LOC sing 236 n n C2 H2A LOC sing 237 n n C2 H2B LOC sing 238 n n C4 H4 LOC sing 239 n n C4 H4A LOC sing 240 n n C4 H4B LOC sing 241 n n C6 H6 LOC sing 242 n n C6 H6A LOC sing 243 n n C6 H6B LOC sing 244 n n C20 H20 LOC sing 245 n n C19 H19 LOC sing 246 n n C18 H18 LOC sing 247 n n C18 H18A LOC sing 248 n n C18 H18B LOC sing 249 n n # _atom_sites.entry_id 6IN1 _atom_sites.fract_transf_matrix[1][1] 0.025885 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022274 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012779 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LOC A 1 200 200 LOC DRG . C 3 O4B A 1 201 201 O4B O4B . D 4 NA A 1 202 202 NA NA . E 5 HOH A 1 301 92 HOH HOH . E 5 HOH A 2 302 148 HOH HOH . E 5 HOH A 3 303 122 HOH HOH . E 5 HOH A 4 304 96 HOH HOH . E 5 HOH A 5 305 145 HOH HOH . E 5 HOH A 6 306 74 HOH HOH . E 5 HOH A 7 307 119 HOH HOH . E 5 HOH A 8 308 127 HOH HOH . E 5 HOH A 9 309 106 HOH HOH . E 5 HOH A 10 310 72 HOH HOH . E 5 HOH A 11 311 35 HOH HOH . E 5 HOH A 12 312 37 HOH HOH . E 5 HOH A 13 313 29 HOH HOH . E 5 HOH A 14 314 58 HOH HOH . E 5 HOH A 15 315 141 HOH HOH . E 5 HOH A 16 316 71 HOH HOH . E 5 HOH A 17 317 69 HOH HOH . E 5 HOH A 18 318 48 HOH HOH . E 5 HOH A 19 319 19 HOH HOH . E 5 HOH A 20 320 131 HOH HOH . E 5 HOH A 21 321 43 HOH HOH . E 5 HOH A 22 322 4 HOH HOH . E 5 HOH A 23 323 94 HOH HOH . E 5 HOH A 24 324 91 HOH HOH . E 5 HOH A 25 325 25 HOH HOH . E 5 HOH A 26 326 12 HOH HOH . E 5 HOH A 27 327 84 HOH HOH . E 5 HOH A 28 328 60 HOH HOH . E 5 HOH A 29 329 44 HOH HOH . E 5 HOH A 30 330 107 HOH HOH . E 5 HOH A 31 331 45 HOH HOH . E 5 HOH A 32 332 3 HOH HOH . E 5 HOH A 33 333 8 HOH HOH . E 5 HOH A 34 334 111 HOH HOH . E 5 HOH A 35 335 78 HOH HOH . E 5 HOH A 36 336 38 HOH HOH . E 5 HOH A 37 337 67 HOH HOH . E 5 HOH A 38 338 88 HOH HOH . E 5 HOH A 39 339 83 HOH HOH . E 5 HOH A 40 340 52 HOH HOH . E 5 HOH A 41 341 1 HOH HOH . E 5 HOH A 42 342 47 HOH HOH . E 5 HOH A 43 343 136 HOH HOH . E 5 HOH A 44 344 18 HOH HOH . E 5 HOH A 45 345 23 HOH HOH . E 5 HOH A 46 346 138 HOH HOH . E 5 HOH A 47 347 5 HOH HOH . E 5 HOH A 48 348 124 HOH HOH . E 5 HOH A 49 349 40 HOH HOH . E 5 HOH A 50 350 7 HOH HOH . E 5 HOH A 51 351 42 HOH HOH . E 5 HOH A 52 352 36 HOH HOH . E 5 HOH A 53 353 147 HOH HOH . E 5 HOH A 54 354 21 HOH HOH . E 5 HOH A 55 355 6 HOH HOH . E 5 HOH A 56 356 133 HOH HOH . E 5 HOH A 57 357 54 HOH HOH . E 5 HOH A 58 358 65 HOH HOH . E 5 HOH A 59 359 53 HOH HOH . E 5 HOH A 60 360 15 HOH HOH . E 5 HOH A 61 361 144 HOH HOH . E 5 HOH A 62 362 110 HOH HOH . E 5 HOH A 63 363 9 HOH HOH . E 5 HOH A 64 364 64 HOH HOH . E 5 HOH A 65 365 55 HOH HOH . E 5 HOH A 66 366 61 HOH HOH . E 5 HOH A 67 367 30 HOH HOH . E 5 HOH A 68 368 73 HOH HOH . E 5 HOH A 69 369 113 HOH HOH . E 5 HOH A 70 370 66 HOH HOH . E 5 HOH A 71 371 80 HOH HOH . E 5 HOH A 72 372 130 HOH HOH . E 5 HOH A 73 373 41 HOH HOH . E 5 HOH A 74 374 22 HOH HOH . E 5 HOH A 75 375 28 HOH HOH . E 5 HOH A 76 376 81 HOH HOH . E 5 HOH A 77 377 102 HOH HOH . E 5 HOH A 78 378 2 HOH HOH . E 5 HOH A 79 379 128 HOH HOH . E 5 HOH A 80 380 146 HOH HOH . E 5 HOH A 81 381 11 HOH HOH . E 5 HOH A 82 382 89 HOH HOH . E 5 HOH A 83 383 134 HOH HOH . E 5 HOH A 84 384 93 HOH HOH . E 5 HOH A 85 385 95 HOH HOH . E 5 HOH A 86 386 79 HOH HOH . E 5 HOH A 87 387 16 HOH HOH . E 5 HOH A 88 388 87 HOH HOH . E 5 HOH A 89 389 27 HOH HOH . E 5 HOH A 90 390 115 HOH HOH . E 5 HOH A 91 391 14 HOH HOH . E 5 HOH A 92 392 10 HOH HOH . E 5 HOH A 93 393 126 HOH HOH . E 5 HOH A 94 394 33 HOH HOH . E 5 HOH A 95 395 117 HOH HOH . E 5 HOH A 96 396 26 HOH HOH . E 5 HOH A 97 397 62 HOH HOH . E 5 HOH A 98 398 112 HOH HOH . E 5 HOH A 99 399 17 HOH HOH . E 5 HOH A 100 400 70 HOH HOH . E 5 HOH A 101 401 86 HOH HOH . E 5 HOH A 102 402 56 HOH HOH . E 5 HOH A 103 403 142 HOH HOH . E 5 HOH A 104 404 51 HOH HOH . E 5 HOH A 105 405 34 HOH HOH . E 5 HOH A 106 406 13 HOH HOH . E 5 HOH A 107 407 101 HOH HOH . E 5 HOH A 108 408 31 HOH HOH . E 5 HOH A 109 409 68 HOH HOH . E 5 HOH A 110 410 77 HOH HOH . E 5 HOH A 111 411 143 HOH HOH . E 5 HOH A 112 412 99 HOH HOH . E 5 HOH A 113 413 46 HOH HOH . E 5 HOH A 114 414 24 HOH HOH . E 5 HOH A 115 415 114 HOH HOH . E 5 HOH A 116 416 20 HOH HOH . E 5 HOH A 117 417 76 HOH HOH . E 5 HOH A 118 418 140 HOH HOH . E 5 HOH A 119 419 125 HOH HOH . E 5 HOH A 120 420 49 HOH HOH . E 5 HOH A 121 421 121 HOH HOH . E 5 HOH A 122 422 57 HOH HOH . E 5 HOH A 123 423 103 HOH HOH . E 5 HOH A 124 424 59 HOH HOH . E 5 HOH A 125 425 32 HOH HOH . E 5 HOH A 126 426 109 HOH HOH . E 5 HOH A 127 427 97 HOH HOH . E 5 HOH A 128 428 116 HOH HOH . E 5 HOH A 129 429 50 HOH HOH . E 5 HOH A 130 430 82 HOH HOH . E 5 HOH A 131 431 149 HOH HOH . E 5 HOH A 132 432 100 HOH HOH . E 5 HOH A 133 433 139 HOH HOH . E 5 HOH A 134 434 104 HOH HOH . E 5 HOH A 135 435 98 HOH HOH . E 5 HOH A 136 436 39 HOH HOH . E 5 HOH A 137 437 132 HOH HOH . E 5 HOH A 138 438 105 HOH HOH . E 5 HOH A 139 439 135 HOH HOH . E 5 HOH A 140 440 75 HOH HOH . E 5 HOH A 141 441 123 HOH HOH . E 5 HOH A 142 442 137 HOH HOH . E 5 HOH A 143 443 108 HOH HOH . E 5 HOH A 144 444 85 HOH HOH . E 5 HOH A 145 445 129 HOH HOH . E 5 HOH A 146 446 90 HOH HOH . E 5 HOH A 147 447 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 LOC . . . B 2 -14.04 6.749 -5.052 1 24.97 ? O4 LOC 200 A 1 HETATM 2 C C12 LOC . . . B 2 -15.203 7.121 -4.872 1 25.33 ? C12 LOC 200 A 1 HETATM 3 C C13 LOC . . . B 2 -16.329 6.699 -5.828 1 22.75 ? C13 LOC 200 A 1 HETATM 4 N N1 LOC . . . B 2 -15.592 7.891 -3.846 1 19.3 ? N1 LOC 200 A 1 HETATM 5 C C11 LOC . . . B 2 -14.629 8.472 -2.874 1 20.92 ? C11 LOC 200 A 1 HETATM 6 C C14 LOC . . . B 2 -14.223 7.689 -1.72 1 17.84 ? C14 LOC 200 A 1 HETATM 7 C C15 LOC . . . B 2 -15.203 6.758 -1.327 1 16.46 ? C15 LOC 200 A 1 HETATM 8 C C10 LOC . . . B 2 -15.035 9.919 -2.556 1 19.69 ? C10 LOC 200 A 1 HETATM 9 C C9 LOC . . . B 2 -13.971 10.581 -1.698 1 22.66 ? C9 LOC 200 A 1 HETATM 10 C C8 LOC . . . B 2 -12.661 10.17 -1.999 1 20.63 ? C8 LOC 200 A 1 HETATM 11 C C7 LOC . . . B 2 -11.896 11.212 -2.544 1 24.04 ? C7 LOC 200 A 1 HETATM 12 C C5 LOC . . . B 2 -10.563 10.979 -2.867 1 25.76 ? C5 LOC 200 A 1 HETATM 13 C C3 LOC . . . B 2 -10.023 9.726 -2.633 1 21.14 ? C3 LOC 200 A 1 HETATM 14 C C1 LOC . . . B 2 -10.78 8.695 -2.075 1 21.82 ? C1 LOC 200 A 1 HETATM 15 O O1 LOC . . . B 2 -10.166 7.491 -1.892 1 18.34 ? O1 LOC 200 A 1 HETATM 16 C C2 LOC . . . B 2 -10.263 6.65 -3.046 1 19.49 ? C2 LOC 200 A 1 HETATM 17 O O2 LOC . . . B 2 -8.715 9.495 -2.957 1 20.36 ? O2 LOC 200 A 1 HETATM 18 C C4 LOC . . . B 2 -7.797 9.979 -1.965 1 22.32 ? C4 LOC 200 A 1 HETATM 19 O O3 LOC . . . B 2 -9.722 11.909 -3.426 1 23.27 ? O3 LOC 200 A 1 HETATM 20 C C6 LOC . . . B 2 -10.332 13.186 -3.665 1 25.89 ? C6 LOC 200 A 1 HETATM 21 C C22 LOC . . . B 2 -12.125 8.905 -1.731 1 19.96 ? C22 LOC 200 A 1 HETATM 22 C C21 LOC . . . B 2 -12.945 7.878 -1.194 1 18.69 ? C21 LOC 200 A 1 HETATM 23 C C20 LOC . . . B 2 -12.335 7.214 -0.131 1 18.47 ? C20 LOC 200 A 1 HETATM 24 C C19 LOC . . . B 2 -12.852 6.171 0.654 1 18.88 ? C19 LOC 200 A 1 HETATM 25 C C17 LOC . . . B 2 -14.098 5.545 0.596 1 18.48 ? C17 LOC 200 A 1 HETATM 26 C C16 LOC . . . B 2 -15.164 5.817 -0.265 1 16.12 ? C16 LOC 200 A 1 HETATM 27 O O5 LOC . . . B 2 -16.183 5.139 -0.079 1 17.36 ? O5 LOC 200 A 1 HETATM 28 O O6 LOC . . . B 2 -14.387 4.505 1.457 1 20.4 ? O6 LOC 200 A 1 HETATM 29 C C18 LOC . . . B 2 -13.266 3.871 2.097 1 19.42 ? C18 LOC 200 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #