data_6INY # _model_server_result.job_id s1oUiCK1YiQ_UqbWLQdnJQ _model_server_result.datetime_utc '2024-10-11 08:23:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iny # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6INY # _exptl.entry_id 6INY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6INY _cell.length_a 71.635 _cell.length_b 71.635 _cell.length_c 364.356 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6INY _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 67 A GLY 63 1_555 A N MSE 68 A MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 68 A MSE 64 1_555 A N SER 69 A SER 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale3 A C THR 105 A THR 101 1_555 A N MSE 106 A MSE 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 106 A MSE 102 1_555 A N ASP 107 A ASP 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale5 A C ARG 120 A ARG 116 1_555 A N MSE 121 A MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 121 A MSE 117 1_555 A N GLY 122 A GLY 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 A C ALA 140 A ALA 136 1_555 A N MSE 141 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale8 A C MSE 141 A MSE 137 1_555 A N HIS 142 A HIS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C ALA 170 A ALA 166 1_555 A N MSE 171 A MSE 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale10 A C MSE 171 A MSE 167 1_555 A N LEU 172 A LEU 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale11 A C LEU 172 A LEU 168 1_555 A N MSE 173 A MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale12 A C MSE 173 A MSE 169 1_555 A N ARG 174 A ARG 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale13 A C VAL 246 A VAL 242 1_555 A N MSE 247 A MSE 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 A C MSE 247 A MSE 243 1_555 A N ASN 248 A ASN 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale15 A C ASN 251 A ASN 247 1_555 A N MSE 252 A MSE 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A OD1 ASN 251 A ASN 247 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? covale ? covale16 A C MSE 252 A MSE 248 1_555 A N SER 253 A SER 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? metalc ? metalc2 A OD1 ASP 260 A ASP 256 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc3 A OD2 ASP 260 A ASP 256 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc4 A OD2 ASP 260 A ASP 256 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? covale ? covale17 A C ARG 332 A ARG 328 1_555 A N MSE 333 A MSE 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale18 A C MSE 333 A MSE 329 1_555 A N ARG 334 A ARG 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale19 A C PHE 339 A PHE 335 1_555 A N MSE 340 A MSE 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale20 A C MSE 340 A MSE 336 1_555 A N THR 341 A THR 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale21 A C LEU 356 A LEU 352 1_555 A N MSE 357 A MSE 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale22 A C MSE 357 A MSE 353 1_555 A N ALA 358 A ALA 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale23 A C ARG 369 A ARG 365 1_555 A N MSE 370 A MSE 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale24 A C MSE 370 A MSE 366 1_555 A N LEU 371 A LEU 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale25 A C LEU 417 A LEU 413 1_555 A N MSE 418 A MSE 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale26 A C MSE 418 A MSE 414 1_555 A N GLN 419 A GLN 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale27 A C ASP 443 A ASP 439 1_555 A N MSE 444 A MSE 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale28 A C MSE 444 A MSE 440 1_555 A N THR 445 A THR 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc5 B O2G ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc6 B O1B ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc7 B O1A ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc8 B O2A ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc9 B O3A ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc10 C MG MG . A MG 502 1_555 E O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc11 D MG MG . A MG 503 1_555 E O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc12 D MG MG . A MG 503 1_555 E O HOH . A HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6INY _atom_sites.fract_transf_matrix[1][1] 0.01396 _atom_sites.fract_transf_matrix[1][2] 0.00806 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 501 1 ANP ANP . C 3 MG A 1 502 1 MG MG . D 3 MG A 1 503 2 MG MG . E 4 HOH A 1 601 39 HOH HOH . E 4 HOH A 2 602 85 HOH HOH . E 4 HOH A 3 603 13 HOH HOH . E 4 HOH A 4 604 50 HOH HOH . E 4 HOH A 5 605 57 HOH HOH . E 4 HOH A 6 606 14 HOH HOH . E 4 HOH A 7 607 111 HOH HOH . E 4 HOH A 8 608 30 HOH HOH . E 4 HOH A 9 609 54 HOH HOH . E 4 HOH A 10 610 60 HOH HOH . E 4 HOH A 11 611 58 HOH HOH . E 4 HOH A 12 612 62 HOH HOH . E 4 HOH A 13 613 154 HOH HOH . E 4 HOH A 14 614 25 HOH HOH . E 4 HOH A 15 615 89 HOH HOH . E 4 HOH A 16 616 21 HOH HOH . E 4 HOH A 17 617 149 HOH HOH . E 4 HOH A 18 618 147 HOH HOH . E 4 HOH A 19 619 34 HOH HOH . E 4 HOH A 20 620 42 HOH HOH . E 4 HOH A 21 621 29 HOH HOH . E 4 HOH A 22 622 8 HOH HOH . E 4 HOH A 23 623 40 HOH HOH . E 4 HOH A 24 624 113 HOH HOH . E 4 HOH A 25 625 15 HOH HOH . E 4 HOH A 26 626 106 HOH HOH . E 4 HOH A 27 627 11 HOH HOH . E 4 HOH A 28 628 37 HOH HOH . E 4 HOH A 29 629 27 HOH HOH . E 4 HOH A 30 630 4 HOH HOH . E 4 HOH A 31 631 38 HOH HOH . E 4 HOH A 32 632 84 HOH HOH . E 4 HOH A 33 633 156 HOH HOH . E 4 HOH A 34 634 138 HOH HOH . E 4 HOH A 35 635 31 HOH HOH . E 4 HOH A 36 636 36 HOH HOH . E 4 HOH A 37 637 137 HOH HOH . E 4 HOH A 38 638 20 HOH HOH . E 4 HOH A 39 639 121 HOH HOH . E 4 HOH A 40 640 101 HOH HOH . E 4 HOH A 41 641 5 HOH HOH . E 4 HOH A 42 642 88 HOH HOH . E 4 HOH A 43 643 44 HOH HOH . E 4 HOH A 44 644 114 HOH HOH . E 4 HOH A 45 645 59 HOH HOH . E 4 HOH A 46 646 26 HOH HOH . E 4 HOH A 47 647 17 HOH HOH . E 4 HOH A 48 648 16 HOH HOH . E 4 HOH A 49 649 75 HOH HOH . E 4 HOH A 50 650 48 HOH HOH . E 4 HOH A 51 651 69 HOH HOH . E 4 HOH A 52 652 47 HOH HOH . E 4 HOH A 53 653 66 HOH HOH . E 4 HOH A 54 654 135 HOH HOH . E 4 HOH A 55 655 90 HOH HOH . E 4 HOH A 56 656 45 HOH HOH . E 4 HOH A 57 657 51 HOH HOH . E 4 HOH A 58 658 10 HOH HOH . E 4 HOH A 59 659 12 HOH HOH . E 4 HOH A 60 660 157 HOH HOH . E 4 HOH A 61 661 43 HOH HOH . E 4 HOH A 62 662 82 HOH HOH . E 4 HOH A 63 663 83 HOH HOH . E 4 HOH A 64 664 49 HOH HOH . E 4 HOH A 65 665 41 HOH HOH . E 4 HOH A 66 666 18 HOH HOH . E 4 HOH A 67 667 1 HOH HOH . E 4 HOH A 68 668 91 HOH HOH . E 4 HOH A 69 669 72 HOH HOH . E 4 HOH A 70 670 97 HOH HOH . E 4 HOH A 71 671 56 HOH HOH . E 4 HOH A 72 672 63 HOH HOH . E 4 HOH A 73 673 74 HOH HOH . E 4 HOH A 74 674 99 HOH HOH . E 4 HOH A 75 675 155 HOH HOH . E 4 HOH A 76 676 73 HOH HOH . E 4 HOH A 77 677 33 HOH HOH . E 4 HOH A 78 678 86 HOH HOH . E 4 HOH A 79 679 150 HOH HOH . E 4 HOH A 80 680 9 HOH HOH . E 4 HOH A 81 681 92 HOH HOH . E 4 HOH A 82 682 65 HOH HOH . E 4 HOH A 83 683 67 HOH HOH . E 4 HOH A 84 684 119 HOH HOH . E 4 HOH A 85 685 153 HOH HOH . E 4 HOH A 86 686 55 HOH HOH . E 4 HOH A 87 687 19 HOH HOH . E 4 HOH A 88 688 23 HOH HOH . E 4 HOH A 89 689 32 HOH HOH . E 4 HOH A 90 690 61 HOH HOH . E 4 HOH A 91 691 118 HOH HOH . E 4 HOH A 92 692 2 HOH HOH . E 4 HOH A 93 693 139 HOH HOH . E 4 HOH A 94 694 77 HOH HOH . E 4 HOH A 95 695 81 HOH HOH . E 4 HOH A 96 696 52 HOH HOH . E 4 HOH A 97 697 24 HOH HOH . E 4 HOH A 98 698 158 HOH HOH . E 4 HOH A 99 699 96 HOH HOH . E 4 HOH A 100 700 120 HOH HOH . E 4 HOH A 101 701 159 HOH HOH . E 4 HOH A 102 702 94 HOH HOH . E 4 HOH A 103 703 80 HOH HOH . E 4 HOH A 104 704 100 HOH HOH . E 4 HOH A 105 705 28 HOH HOH . E 4 HOH A 106 706 53 HOH HOH . E 4 HOH A 107 707 127 HOH HOH . E 4 HOH A 108 708 104 HOH HOH . E 4 HOH A 109 709 64 HOH HOH . E 4 HOH A 110 710 7 HOH HOH . E 4 HOH A 111 711 117 HOH HOH . E 4 HOH A 112 712 108 HOH HOH . E 4 HOH A 113 713 116 HOH HOH . E 4 HOH A 114 714 141 HOH HOH . E 4 HOH A 115 715 102 HOH HOH . E 4 HOH A 116 716 132 HOH HOH . E 4 HOH A 117 717 152 HOH HOH . E 4 HOH A 118 718 151 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -1.714 _atom_site.Cartn_y 52.09 _atom_site.Cartn_z 173.761 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 1 #