data_6IO4
#
_model_server_result.job_id            YSzyb1eQISeLkqduKWnX_g 
_model_server_result.datetime_utc      '2024-11-24 18:48:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6io4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":401}' 
#
_entry.id    6IO4 
#
_exptl.entry_id    6IO4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              107.868 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SILVER ION' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         87.66 
_cell.angle_beta          86.94 
_cell.angle_gamma         87.26 
_cell.entry_id            6IO4 
_cell.length_a            87.991 
_cell.length_b            110.019 
_cell.length_c            139.712 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6IO4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
? monomeric 1 author_defined_assembly 7 
? monomeric 1 author_defined_assembly 8 
? monomeric 1 author_defined_assembly 9 
? monomeric 1 author_defined_assembly 10 
? monomeric 1 author_defined_assembly 11 
? monomeric 1 author_defined_assembly 12 
? monomeric 1 author_defined_assembly 13 
? monomeric 1 author_defined_assembly 14 
? monomeric 1 author_defined_assembly 15 
? monomeric 1 author_defined_assembly 16 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,Q 1 1 
B,R 2 1 
C,S 3 1 
D,T 4 1 
E,U 5 1 
F,V 6 1 
G,W 7 1 
H,X 8 1 
I,Y 9 1 
J,Z 10 1 
K,AA 11 1 
L,BA 12 1 
M,CA 13 1 
N,DA 14 1 
O,EA 15 1 
P,FA 16 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 CA N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 148 A CYS 149 1_555 Q AG AG . A AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? 
metalc ? metalc2 A NE2 HIS 175 A HIS 176 1_555 Q AG AG . A AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc3 B SG CYS 148 B CYS 149 1_555 R AG AG . B AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc4 B NE2 HIS 175 B HIS 176 1_555 R AG AG . B AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc5 C SG CYS 148 C CYS 149 1_555 S AG AG . C AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc6 C NE2 HIS 175 C HIS 176 1_555 S AG AG . C AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc7 D SG CYS 148 D CYS 149 1_555 T AG AG . D AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc8 D NE2 HIS 175 D HIS 176 1_555 T AG AG . D AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc9 E SG CYS 148 E CYS 149 1_555 U AG AG . E AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc10 E NE2 HIS 175 E HIS 176 1_555 U AG AG . E AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc11 F SG CYS 148 F CYS 149 1_555 V AG AG . F AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc12 F NE2 HIS 175 F HIS 176 1_555 V AG AG . F AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc13 G SG CYS 148 G CYS 149 1_555 W AG AG . G AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? 
metalc ? metalc14 G NE2 HIS 175 G HIS 176 1_555 W AG AG . G AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc15 H SG CYS 148 H CYS 149 1_555 X AG AG . H AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc16 H NE2 HIS 175 H HIS 176 1_555 X AG AG . H AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc17 I SG CYS 148 I CYS 149 1_555 Y AG AG . I AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc18 I NE2 HIS 175 I HIS 176 1_555 Y AG AG . I AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc19 J SG CYS 148 J CYS 149 1_555 Z AG AG . J AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? 
metalc ? metalc20 J NE2 HIS 175 J HIS 176 1_555 Z AG AG . J AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc21 K SG CYS 148 K CYS 149 1_555 AA AG AG . K AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc22 K NE2 HIS 175 K HIS 176 1_555 AA AG AG . K AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc23 L SG CYS 148 L CYS 149 1_555 BA AG AG . L AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc24 L NE2 HIS 175 L HIS 176 1_555 BA AG AG . L AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc25 M SG CYS 148 M CYS 149 1_555 CA AG AG . M AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
metalc ? metalc26 M NE2 HIS 175 M HIS 176 1_555 CA AG AG . M AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc27 N SG CYS 148 N CYS 149 1_555 DA AG AG . N AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc28 N NE2 HIS 175 N HIS 176 1_555 DA AG AG . N AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc29 O SG CYS 148 O CYS 149 1_555 EA AG AG . O AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc30 O NE2 HIS 175 O HIS 176 1_555 EA AG AG . O AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc31 P SG CYS 148 P CYS 149 1_555 FA AG AG . P AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc32 P NE2 HIS 175 P HIS 176 1_555 FA AG AG . P AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
#
_chem_comp.formula           'Ag 1' 
_chem_comp.formula_weight    107.868 
_chem_comp.id                AG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SILVER ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6IO4 
_atom_sites.fract_transf_matrix[1][1]    0.011365 
_atom_sites.fract_transf_matrix[1][2]    -0.000544 
_atom_sites.fract_transf_matrix[1][3]    -0.000588 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0091 
_atom_sites.fract_transf_matrix[2][3]    -0.00035 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007173 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Q 2 AG A 1 401 5 AG AG . 
R 2 AG B 1 401 6 AG AG . 
S 2 AG C 1 401 7 AG AG . 
T 2 AG D 1 401 3 AG AG . 
U 2 AG E 1 401 11 AG AG . 
V 2 AG F 1 401 10 AG AG . 
W 2 AG G 1 401 9 AG AG . 
X 2 AG H 1 401 12 AG AG . 
Y 2 AG I 1 401 15 AG AG . 
Z 2 AG J 1 401 8 AG AG . 
AA 2 AG K 1 401 14 AG AG . 
BA 2 AG L 1 401 4 AG AG . 
CA 2 AG M 1 401 13 AG AG . 
DA 2 AG N 1 401 16 AG AG . 
EA 2 AG O 1 401 1 AG AG . 
FA 2 AG P 1 401 2 AG AG . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           AG 
_atom_site.label_atom_id         AG 
_atom_site.label_comp_id         AG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         W 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               96.055 
_atom_site.Cartn_y               -49.62 
_atom_site.Cartn_z               38.168 
_atom_site.occupancy             0.81 
_atom_site.B_iso_or_equiv        129.52 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          AG 
_atom_site.auth_comp_id          AG 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          G 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           208 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#