data_6IOB
#
_model_server_result.job_id            Qu0Ia02Hwl1XP-mexkIcug 
_model_server_result.datetime_utc      '2024-11-24 14:27:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6iob 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6IOB 
#
_exptl.entry_id    6IOB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              351.64 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IRON/SULFUR CLUSTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.19 
_cell.angle_gamma         90 
_cell.entry_id            6IOB 
_cell.length_a            39.151 
_cell.length_b            51.158 
_cell.length_c            40.957 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6IOB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 27 A CYS 24 1_555 C FE2 SF4 . A SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc2 A SG CYS 30 A CYS 27 1_555 C FE4 SF4 . A SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
metalc ? metalc3 A ND1 HIS 98 A HIS 95 1_555 C FE3 SF4 . A SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc4 A SG CYS 123 A CYS 120 1_555 C FE1 SF4 . A SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
#
_chem_comp.formula           'Fe4 S4' 
_chem_comp.formula_weight    351.64 
_chem_comp.id                SF4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IRON/SULFUR CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S2 SF4 sing 290 n n 
FE1 S3 SF4 sing 291 n n 
FE1 S4 SF4 sing 292 n n 
FE2 S1 SF4 sing 293 n n 
FE2 S3 SF4 sing 294 n n 
FE2 S4 SF4 sing 295 n n 
FE3 S1 SF4 sing 296 n n 
FE3 S2 SF4 sing 297 n n 
FE3 S4 SF4 sing 298 n n 
FE4 S1 SF4 sing 299 n n 
FE4 S2 SF4 sing 300 n n 
FE4 S3 SF4 sing 301 n n 
#
_atom_sites.entry_id                     6IOB 
_atom_sites.fract_transf_matrix[1][1]    0.025542 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000975 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019547 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024434 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 URA A 1 301 211 URA URA . 
C 3 SF4 A 1 302 1 SF4 SF4 . 
D 4 HOH A 1 401 30 HOH HOH . 
D 4 HOH A 2 402 101 HOH HOH . 
D 4 HOH A 3 403 68 HOH HOH . 
D 4 HOH A 4 404 100 HOH HOH . 
D 4 HOH A 5 405 24 HOH HOH . 
D 4 HOH A 6 406 102 HOH HOH . 
D 4 HOH A 7 407 55 HOH HOH . 
D 4 HOH A 8 408 6 HOH HOH . 
D 4 HOH A 9 409 4 HOH HOH . 
D 4 HOH A 10 410 95 HOH HOH . 
D 4 HOH A 11 411 33 HOH HOH . 
D 4 HOH A 12 412 103 HOH HOH . 
D 4 HOH A 13 413 64 HOH HOH . 
D 4 HOH A 14 414 27 HOH HOH . 
D 4 HOH A 15 415 99 HOH HOH . 
D 4 HOH A 16 416 17 HOH HOH . 
D 4 HOH A 17 417 31 HOH HOH . 
D 4 HOH A 18 418 21 HOH HOH . 
D 4 HOH A 19 419 19 HOH HOH . 
D 4 HOH A 20 420 18 HOH HOH . 
D 4 HOH A 21 421 45 HOH HOH . 
D 4 HOH A 22 422 40 HOH HOH . 
D 4 HOH A 23 423 3 HOH HOH . 
D 4 HOH A 24 424 5 HOH HOH . 
D 4 HOH A 25 425 49 HOH HOH . 
D 4 HOH A 26 426 48 HOH HOH . 
D 4 HOH A 27 427 82 HOH HOH . 
D 4 HOH A 28 428 61 HOH HOH . 
D 4 HOH A 29 429 13 HOH HOH . 
D 4 HOH A 30 430 66 HOH HOH . 
D 4 HOH A 31 431 36 HOH HOH . 
D 4 HOH A 32 432 44 HOH HOH . 
D 4 HOH A 33 433 34 HOH HOH . 
D 4 HOH A 34 434 25 HOH HOH . 
D 4 HOH A 35 435 46 HOH HOH . 
D 4 HOH A 36 436 10 HOH HOH . 
D 4 HOH A 37 437 7 HOH HOH . 
D 4 HOH A 38 438 37 HOH HOH . 
D 4 HOH A 39 439 39 HOH HOH . 
D 4 HOH A 40 440 9 HOH HOH . 
D 4 HOH A 41 441 69 HOH HOH . 
D 4 HOH A 42 442 58 HOH HOH . 
D 4 HOH A 43 443 52 HOH HOH . 
D 4 HOH A 44 444 32 HOH HOH . 
D 4 HOH A 45 445 35 HOH HOH . 
D 4 HOH A 46 446 23 HOH HOH . 
D 4 HOH A 47 447 104 HOH HOH . 
D 4 HOH A 48 448 65 HOH HOH . 
D 4 HOH A 49 449 98 HOH HOH . 
D 4 HOH A 50 450 2 HOH HOH . 
D 4 HOH A 51 451 96 HOH HOH . 
D 4 HOH A 52 452 15 HOH HOH . 
D 4 HOH A 53 453 14 HOH HOH . 
D 4 HOH A 54 454 12 HOH HOH . 
D 4 HOH A 55 455 16 HOH HOH . 
D 4 HOH A 56 456 50 HOH HOH . 
D 4 HOH A 57 457 43 HOH HOH . 
D 4 HOH A 58 458 8 HOH HOH . 
D 4 HOH A 59 459 94 HOH HOH . 
D 4 HOH A 60 460 1 HOH HOH . 
D 4 HOH A 61 461 20 HOH HOH . 
D 4 HOH A 62 462 47 HOH HOH . 
D 4 HOH A 63 463 57 HOH HOH . 
D 4 HOH A 64 464 26 HOH HOH . 
D 4 HOH A 65 465 87 HOH HOH . 
D 4 HOH A 66 466 70 HOH HOH . 
D 4 HOH A 67 467 54 HOH HOH . 
D 4 HOH A 68 468 29 HOH HOH . 
D 4 HOH A 69 469 56 HOH HOH . 
D 4 HOH A 70 470 53 HOH HOH . 
D 4 HOH A 71 471 73 HOH HOH . 
D 4 HOH A 72 472 22 HOH HOH . 
D 4 HOH A 73 473 91 HOH HOH . 
D 4 HOH A 74 474 88 HOH HOH . 
D 4 HOH A 75 475 28 HOH HOH . 
D 4 HOH A 76 476 83 HOH HOH . 
D 4 HOH A 77 477 84 HOH HOH . 
D 4 HOH A 78 478 93 HOH HOH . 
D 4 HOH A 79 479 60 HOH HOH . 
D 4 HOH A 80 480 74 HOH HOH . 
D 4 HOH A 81 481 71 HOH HOH . 
D 4 HOH A 82 482 59 HOH HOH . 
D 4 HOH A 83 483 42 HOH HOH . 
D 4 HOH A 84 484 89 HOH HOH . 
D 4 HOH A 85 485 79 HOH HOH . 
D 4 HOH A 86 486 105 HOH HOH . 
D 4 HOH A 87 487 77 HOH HOH . 
D 4 HOH A 88 488 76 HOH HOH . 
D 4 HOH A 89 489 106 HOH HOH . 
D 4 HOH A 90 490 63 HOH HOH . 
D 4 HOH A 91 491 72 HOH HOH . 
D 4 HOH A 92 492 38 HOH HOH . 
D 4 HOH A 93 493 41 HOH HOH . 
D 4 HOH A 94 494 97 HOH HOH . 
D 4 HOH A 95 495 75 HOH HOH . 
D 4 HOH A 96 496 51 HOH HOH . 
D 4 HOH A 97 497 90 HOH HOH . 
D 4 HOH A 98 498 67 HOH HOH . 
D 4 HOH A 99 499 85 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 SF4 . . . C 3 2.933 0.279 7.697 1 15.25 ? FE1 SF4 302 A 1 
HETATM 2 FE FE2 SF4 . . . C 3 0.712 -0.772 6.286 1 15.4 ? FE2 SF4 302 A 1 
HETATM 3 FE FE3 SF4 . . . C 3 0.445 -0.342 9.028 1 16.82 ? FE3 SF4 302 A 1 
HETATM 4 FE FE4 SF4 . . . C 3 2.129 -2.485 8.189 1 13.5 ? FE4 SF4 302 A 1 
HETATM 5 S S1 SF4 . . . C 3 0.007 -2.127 7.838 1 18.68 ? S1 SF4 302 A 1 
HETATM 6 S S2 SF4 . . . C 3 2.482 -0.822 9.521 1 21.72 ? S2 SF4 302 A 1 
HETATM 7 S S3 SF4 . . . C 3 2.772 -1.442 6.377 1 18.04 ? S3 SF4 302 A 1 
HETATM 8 S S4 SF4 . . . C 3 0.915 1.075 7.411 1 19.7 ? S4 SF4 302 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           220 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#