data_6IQO # _model_server_result.job_id Ziv3w5dTI2Vc08tcZ5Yt7A _model_server_result.datetime_utc '2025-03-06 07:00:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6IQO # _exptl.entry_id 6IQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 129.73 _cell.angle_gamma 90 _cell.entry_id 6IQO _cell.length_a 109.085 _cell.length_b 40.86 _cell.length_c 77.819 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D 1 1 B,C,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 44 A ILE 44 1_555 A N MSE 45 A MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale2 A C MSE 45 A MSE 45 1_555 A N ARG 46 A ARG 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 B C ILE 44 B ILE 44 1_555 B N MSE 45 B MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 B C MSE 45 B MSE 45 1_555 B N ARG 46 B ARG 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 2PE sing 1 n n O1 HO1 2PE sing 2 n n C2 C3 2PE sing 3 n n C2 H21 2PE sing 4 n n C2 H22 2PE sing 5 n n C3 O4 2PE sing 6 n n C3 H31 2PE sing 7 n n C3 H32 2PE sing 8 n n O4 C5 2PE sing 9 n n C5 C6 2PE sing 10 n n C5 H51 2PE sing 11 n n C5 H52 2PE sing 12 n n C6 O7 2PE sing 13 n n C6 H61 2PE sing 14 n n C6 H62 2PE sing 15 n n O7 C8 2PE sing 16 n n C8 C9 2PE sing 17 n n C8 H81 2PE sing 18 n n C8 H82 2PE sing 19 n n C9 O10 2PE sing 20 n n C9 H91 2PE sing 21 n n C9 H92 2PE sing 22 n n O10 C11 2PE sing 23 n n C11 C12 2PE sing 24 n n C11 H111 2PE sing 25 n n C11 H112 2PE sing 26 n n C12 O13 2PE sing 27 n n C12 H121 2PE sing 28 n n C12 H122 2PE sing 29 n n O13 C14 2PE sing 30 n n C14 C15 2PE sing 31 n n C14 H141 2PE sing 32 n n C14 H142 2PE sing 33 n n C15 O16 2PE sing 34 n n C15 H151 2PE sing 35 n n C15 H152 2PE sing 36 n n O16 C17 2PE sing 37 n n C17 C18 2PE sing 38 n n C17 H171 2PE sing 39 n n C17 H172 2PE sing 40 n n C18 O19 2PE sing 41 n n C18 H181 2PE sing 42 n n C18 H182 2PE sing 43 n n O19 C20 2PE sing 44 n n C20 C21 2PE sing 45 n n C20 H201 2PE sing 46 n n C20 H202 2PE sing 47 n n C21 O22 2PE sing 48 n n C21 H211 2PE sing 49 n n C21 H212 2PE sing 50 n n O22 C23 2PE sing 51 n n C23 C24 2PE sing 52 n n C23 H231 2PE sing 53 n n C23 H232 2PE sing 54 n n C24 O25 2PE sing 55 n n C24 H241 2PE sing 56 n n C24 H242 2PE sing 57 n n O25 C26 2PE sing 58 n n C26 C27 2PE sing 59 n n C26 H261 2PE sing 60 n n C26 H262 2PE sing 61 n n C27 O28 2PE sing 62 n n C27 H271 2PE sing 63 n n C27 H272 2PE sing 64 n n O28 HO2 2PE sing 65 n n # _atom_sites.entry_id 6IQO _atom_sites.fract_transf_matrix[1][1] 0.009167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00762 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01671 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2PE B 1 201 1 2PE P2K . D 3 HOH A 1 201 37 HOH HOH . D 3 HOH A 2 202 42 HOH HOH . D 3 HOH A 3 203 14 HOH HOH . D 3 HOH A 4 204 21 HOH HOH . D 3 HOH A 5 205 18 HOH HOH . D 3 HOH A 6 206 31 HOH HOH . D 3 HOH A 7 207 32 HOH HOH . D 3 HOH A 8 208 60 HOH HOH . D 3 HOH A 9 209 22 HOH HOH . D 3 HOH A 10 210 36 HOH HOH . D 3 HOH A 11 211 73 HOH HOH . D 3 HOH A 12 212 75 HOH HOH . D 3 HOH A 13 213 17 HOH HOH . D 3 HOH A 14 214 39 HOH HOH . D 3 HOH A 15 215 13 HOH HOH . D 3 HOH A 16 216 3 HOH HOH . D 3 HOH A 17 217 74 HOH HOH . D 3 HOH A 18 218 15 HOH HOH . D 3 HOH A 19 219 57 HOH HOH . D 3 HOH A 20 220 58 HOH HOH . D 3 HOH A 21 221 7 HOH HOH . D 3 HOH A 22 222 23 HOH HOH . D 3 HOH A 23 223 72 HOH HOH . D 3 HOH A 24 224 11 HOH HOH . D 3 HOH A 25 225 26 HOH HOH . D 3 HOH A 26 226 38 HOH HOH . D 3 HOH A 27 227 56 HOH HOH . D 3 HOH A 28 228 33 HOH HOH . D 3 HOH A 29 229 34 HOH HOH . D 3 HOH A 30 230 19 HOH HOH . D 3 HOH A 31 231 47 HOH HOH . D 3 HOH A 32 232 27 HOH HOH . D 3 HOH A 33 233 51 HOH HOH . D 3 HOH A 34 234 50 HOH HOH . D 3 HOH A 35 235 68 HOH HOH . D 3 HOH A 36 236 49 HOH HOH . D 3 HOH A 37 237 52 HOH HOH . E 3 HOH B 1 301 29 HOH HOH . E 3 HOH B 2 302 28 HOH HOH . E 3 HOH B 3 303 62 HOH HOH . E 3 HOH B 4 304 24 HOH HOH . E 3 HOH B 5 305 70 HOH HOH . E 3 HOH B 6 306 9 HOH HOH . E 3 HOH B 7 307 41 HOH HOH . E 3 HOH B 8 308 6 HOH HOH . E 3 HOH B 9 309 20 HOH HOH . E 3 HOH B 10 310 25 HOH HOH . E 3 HOH B 11 311 12 HOH HOH . E 3 HOH B 12 312 53 HOH HOH . E 3 HOH B 13 313 63 HOH HOH . E 3 HOH B 14 314 59 HOH HOH . E 3 HOH B 15 315 2 HOH HOH . E 3 HOH B 16 316 5 HOH HOH . E 3 HOH B 17 317 8 HOH HOH . E 3 HOH B 18 318 16 HOH HOH . E 3 HOH B 19 319 40 HOH HOH . E 3 HOH B 20 320 66 HOH HOH . E 3 HOH B 21 321 4 HOH HOH . E 3 HOH B 22 322 30 HOH HOH . E 3 HOH B 23 323 35 HOH HOH . E 3 HOH B 24 324 65 HOH HOH . E 3 HOH B 25 325 45 HOH HOH . E 3 HOH B 26 326 54 HOH HOH . E 3 HOH B 27 327 44 HOH HOH . E 3 HOH B 28 328 67 HOH HOH . E 3 HOH B 29 329 1 HOH HOH . E 3 HOH B 30 330 69 HOH HOH . E 3 HOH B 31 331 71 HOH HOH . E 3 HOH B 32 332 48 HOH HOH . E 3 HOH B 33 333 61 HOH HOH . E 3 HOH B 34 334 10 HOH HOH . E 3 HOH B 35 335 64 HOH HOH . E 3 HOH B 36 336 55 HOH HOH . E 3 HOH B 37 337 43 HOH HOH . E 3 HOH B 38 338 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . C 2 -41.175 -40.837 2.473 1 87.03 ? O1 2PE 201 B 1 HETATM 2 C C2 2PE . . . C 2 -39.905 -41.22 1.948 1 84.74 ? C2 2PE 201 B 1 HETATM 3 C C3 2PE . . . C 2 -40.06 -42.531 1.162 1 85.43 ? C3 2PE 201 B 1 HETATM 4 O O4 2PE . . . C 2 -38.881 -43.34 1.322 1 79.72 ? O4 2PE 201 B 1 HETATM 5 C C5 2PE . . . C 2 -37.862 -43.108 0.305 1 81.42 ? C5 2PE 201 B 1 HETATM 6 C C6 2PE . . . C 2 -36.46 -43.093 0.943 1 76.81 ? C6 2PE 201 B 1 HETATM 7 O O7 2PE . . . C 2 -36.157 -41.813 1.564 1 71.77 ? O7 2PE 201 B 1 HETATM 8 C C8 2PE . . . C 2 -34.99 -41.893 2.441 1 69.75 ? C8 2PE 201 B 1 HETATM 9 C C9 2PE . . . C 2 -33.713 -41.442 1.698 1 62.51 ? C9 2PE 201 B 1 HETATM 10 O O10 2PE . . . C 2 -32.513 -42.035 2.279 1 70.05 ? O10 2PE 201 B 1 HETATM 11 C C11 2PE . . . C 2 -31.571 -41.102 2.908 1 72.32 ? C11 2PE 201 B 1 HETATM 12 C C12 2PE . . . C 2 -32.25 -40.169 3.933 1 68.44 ? C12 2PE 201 B 1 HETATM 13 O O13 2PE . . . C 2 -31.364 -39.91 5.023 1 73.28 ? O13 2PE 201 B 1 HETATM 14 C C14 2PE . . . C 2 -31.825 -40.292 6.357 1 81.69 ? C14 2PE 201 B 1 HETATM 15 C C15 2PE . . . C 2 -32.258 -39.09 7.249 1 82.06 ? C15 2PE 201 B 1 HETATM 16 O O16 2PE . . . C 2 -31.951 -37.803 6.666 1 81.09 ? O16 2PE 201 B 1 HETATM 17 C C17 2PE . . . C 2 -30.7 -37.199 7.038 1 74.4 ? C17 2PE 201 B 1 HETATM 18 C C18 2PE . . . C 2 -30.944 -35.9 7.836 1 67.98 ? C18 2PE 201 B 1 HETATM 19 O O19 2PE . . . C 2 -29.816 -35.617 8.676 1 69.56 ? O19 2PE 201 B 1 HETATM 20 C C20 2PE . . . C 2 -30.108 -34.62 9.648 1 69.02 ? C20 2PE 201 B 1 HETATM 21 C C21 2PE . . . C 2 -28.875 -33.704 9.795 1 61.72 ? C21 2PE 201 B 1 HETATM 22 O O22 2PE . . . C 2 -29.312 -32.38 10.178 1 55 ? O22 2PE 201 B 1 HETATM 23 C C23 2PE . . . C 2 -28.727 -32.045 11.47 1 57.38 ? C23 2PE 201 B 1 HETATM 24 C C24 2PE . . . C 2 -29.159 -30.647 11.941 1 54.45 ? C24 2PE 201 B 1 HETATM 25 O O25 2PE . . . C 2 -28.101 -30.001 12.681 1 54.54 ? O25 2PE 201 B 1 HETATM 26 C C26 2PE . . . C 2 -28.268 -28.569 12.842 1 55.51 ? C26 2PE 201 B 1 HETATM 27 C C27 2PE . . . C 2 -29.065 -28.259 14.133 1 51.72 ? C27 2PE 201 B 1 HETATM 28 O O28 2PE . . . C 2 -30.503 -28.295 13.868 1 48.76 ? O28 2PE 201 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #