data_6IRK # _model_server_result.job_id dBkZ-rWXZ6tmYccnERu8VQ _model_server_result.datetime_utc '2024-11-24 12:08:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6irk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6IRK # _exptl.entry_id 6IRK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IRK _cell.length_a 93.05 _cell.length_b 99 _cell.length_c 101.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IRK _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 93.05 0 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 93.05 0 101.92 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 101.92 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 181 A GLU 181 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc2 A OE2 GLU 217 A GLU 217 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc3 A OE1 GLU 217 A GLU 217 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc4 A OD2 ASP 245 A ASP 245 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc5 A OD1 ASP 255 A ASP 255 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc6 A OD2 ASP 255 A ASP 255 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc7 A OD1 ASP 257 A ASP 257 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc8 A OD2 ASP 287 A ASP 287 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6IRK _atom_sites.fract_transf_matrix[1][1] 0.010747 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010101 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 401 1 MG MG . C 2 MG A 1 402 2 MG MG . D 3 HOH A 1 501 73 HOH HOH . D 3 HOH A 2 502 196 HOH HOH . D 3 HOH A 3 503 193 HOH HOH . D 3 HOH A 4 504 191 HOH HOH . D 3 HOH A 5 505 172 HOH HOH . D 3 HOH A 6 506 86 HOH HOH . D 3 HOH A 7 507 181 HOH HOH . D 3 HOH A 8 508 133 HOH HOH . D 3 HOH A 9 509 177 HOH HOH . D 3 HOH A 10 510 43 HOH HOH . D 3 HOH A 11 511 168 HOH HOH . D 3 HOH A 12 512 137 HOH HOH . D 3 HOH A 13 513 170 HOH HOH . D 3 HOH A 14 514 207 HOH HOH . D 3 HOH A 15 515 128 HOH HOH . D 3 HOH A 16 516 74 HOH HOH . D 3 HOH A 17 517 80 HOH HOH . D 3 HOH A 18 518 189 HOH HOH . D 3 HOH A 19 519 179 HOH HOH . D 3 HOH A 20 520 100 HOH HOH . D 3 HOH A 21 521 85 HOH HOH . D 3 HOH A 22 522 103 HOH HOH . D 3 HOH A 23 523 55 HOH HOH . D 3 HOH A 24 524 61 HOH HOH . D 3 HOH A 25 525 151 HOH HOH . D 3 HOH A 26 526 178 HOH HOH . D 3 HOH A 27 527 60 HOH HOH . D 3 HOH A 28 528 165 HOH HOH . D 3 HOH A 29 529 50 HOH HOH . D 3 HOH A 30 530 66 HOH HOH . D 3 HOH A 31 531 167 HOH HOH . D 3 HOH A 32 532 70 HOH HOH . D 3 HOH A 33 533 206 HOH HOH . D 3 HOH A 34 534 41 HOH HOH . D 3 HOH A 35 535 155 HOH HOH . D 3 HOH A 36 536 78 HOH HOH . D 3 HOH A 37 537 154 HOH HOH . D 3 HOH A 38 538 186 HOH HOH . D 3 HOH A 39 539 90 HOH HOH . D 3 HOH A 40 540 98 HOH HOH . D 3 HOH A 41 541 83 HOH HOH . D 3 HOH A 42 542 33 HOH HOH . D 3 HOH A 43 543 5 HOH HOH . D 3 HOH A 44 544 28 HOH HOH . D 3 HOH A 45 545 195 HOH HOH . D 3 HOH A 46 546 101 HOH HOH . D 3 HOH A 47 547 64 HOH HOH . D 3 HOH A 48 548 136 HOH HOH . D 3 HOH A 49 549 93 HOH HOH . D 3 HOH A 50 550 32 HOH HOH . D 3 HOH A 51 551 131 HOH HOH . D 3 HOH A 52 552 56 HOH HOH . D 3 HOH A 53 553 183 HOH HOH . D 3 HOH A 54 554 13 HOH HOH . D 3 HOH A 55 555 175 HOH HOH . D 3 HOH A 56 556 1 HOH HOH . D 3 HOH A 57 557 202 HOH HOH . D 3 HOH A 58 558 23 HOH HOH . D 3 HOH A 59 559 4 HOH HOH . D 3 HOH A 60 560 34 HOH HOH . D 3 HOH A 61 561 82 HOH HOH . D 3 HOH A 62 562 42 HOH HOH . D 3 HOH A 63 563 77 HOH HOH . D 3 HOH A 64 564 29 HOH HOH . D 3 HOH A 65 565 38 HOH HOH . D 3 HOH A 66 566 184 HOH HOH . D 3 HOH A 67 567 138 HOH HOH . D 3 HOH A 68 568 139 HOH HOH . D 3 HOH A 69 569 113 HOH HOH . D 3 HOH A 70 570 150 HOH HOH . D 3 HOH A 71 571 62 HOH HOH . D 3 HOH A 72 572 106 HOH HOH . D 3 HOH A 73 573 123 HOH HOH . D 3 HOH A 74 574 65 HOH HOH . D 3 HOH A 75 575 72 HOH HOH . D 3 HOH A 76 576 9 HOH HOH . D 3 HOH A 77 577 81 HOH HOH . D 3 HOH A 78 578 140 HOH HOH . D 3 HOH A 79 579 49 HOH HOH . D 3 HOH A 80 580 57 HOH HOH . D 3 HOH A 81 581 48 HOH HOH . D 3 HOH A 82 582 107 HOH HOH . D 3 HOH A 83 583 146 HOH HOH . D 3 HOH A 84 584 115 HOH HOH . D 3 HOH A 85 585 201 HOH HOH . D 3 HOH A 86 586 26 HOH HOH . D 3 HOH A 87 587 51 HOH HOH . D 3 HOH A 88 588 7 HOH HOH . D 3 HOH A 89 589 21 HOH HOH . D 3 HOH A 90 590 2 HOH HOH . D 3 HOH A 91 591 15 HOH HOH . D 3 HOH A 92 592 17 HOH HOH . D 3 HOH A 93 593 162 HOH HOH . D 3 HOH A 94 594 194 HOH HOH . D 3 HOH A 95 595 102 HOH HOH . D 3 HOH A 96 596 164 HOH HOH . D 3 HOH A 97 597 37 HOH HOH . D 3 HOH A 98 598 141 HOH HOH . D 3 HOH A 99 599 10 HOH HOH . D 3 HOH A 100 600 40 HOH HOH . D 3 HOH A 101 601 166 HOH HOH . D 3 HOH A 102 602 24 HOH HOH . D 3 HOH A 103 603 171 HOH HOH . D 3 HOH A 104 604 58 HOH HOH . D 3 HOH A 105 605 12 HOH HOH . D 3 HOH A 106 606 75 HOH HOH . D 3 HOH A 107 607 145 HOH HOH . D 3 HOH A 108 608 148 HOH HOH . D 3 HOH A 109 609 97 HOH HOH . D 3 HOH A 110 610 84 HOH HOH . D 3 HOH A 111 611 71 HOH HOH . D 3 HOH A 112 612 76 HOH HOH . D 3 HOH A 113 613 79 HOH HOH . D 3 HOH A 114 614 105 HOH HOH . D 3 HOH A 115 615 27 HOH HOH . D 3 HOH A 116 616 185 HOH HOH . D 3 HOH A 117 617 205 HOH HOH . D 3 HOH A 118 618 157 HOH HOH . D 3 HOH A 119 619 132 HOH HOH . D 3 HOH A 120 620 112 HOH HOH . D 3 HOH A 121 621 44 HOH HOH . D 3 HOH A 122 622 3 HOH HOH . D 3 HOH A 123 623 18 HOH HOH . D 3 HOH A 124 624 143 HOH HOH . D 3 HOH A 125 625 169 HOH HOH . D 3 HOH A 126 626 20 HOH HOH . D 3 HOH A 127 627 11 HOH HOH . D 3 HOH A 128 628 92 HOH HOH . D 3 HOH A 129 629 174 HOH HOH . D 3 HOH A 130 630 8 HOH HOH . D 3 HOH A 131 631 47 HOH HOH . D 3 HOH A 132 632 63 HOH HOH . D 3 HOH A 133 633 6 HOH HOH . D 3 HOH A 134 634 119 HOH HOH . D 3 HOH A 135 635 69 HOH HOH . D 3 HOH A 136 636 53 HOH HOH . D 3 HOH A 137 637 99 HOH HOH . D 3 HOH A 138 638 104 HOH HOH . D 3 HOH A 139 639 110 HOH HOH . D 3 HOH A 140 640 36 HOH HOH . D 3 HOH A 141 641 54 HOH HOH . D 3 HOH A 142 642 159 HOH HOH . D 3 HOH A 143 643 124 HOH HOH . D 3 HOH A 144 644 116 HOH HOH . D 3 HOH A 145 645 14 HOH HOH . D 3 HOH A 146 646 25 HOH HOH . D 3 HOH A 147 647 68 HOH HOH . D 3 HOH A 148 648 96 HOH HOH . D 3 HOH A 149 649 130 HOH HOH . D 3 HOH A 150 650 156 HOH HOH . D 3 HOH A 151 651 45 HOH HOH . D 3 HOH A 152 652 120 HOH HOH . D 3 HOH A 153 653 46 HOH HOH . D 3 HOH A 154 654 163 HOH HOH . D 3 HOH A 155 655 19 HOH HOH . D 3 HOH A 156 656 30 HOH HOH . D 3 HOH A 157 657 117 HOH HOH . D 3 HOH A 158 658 126 HOH HOH . D 3 HOH A 159 659 209 HOH HOH . D 3 HOH A 160 660 200 HOH HOH . D 3 HOH A 161 661 203 HOH HOH . D 3 HOH A 162 662 88 HOH HOH . D 3 HOH A 163 663 67 HOH HOH . D 3 HOH A 164 664 39 HOH HOH . D 3 HOH A 165 665 31 HOH HOH . D 3 HOH A 166 666 134 HOH HOH . D 3 HOH A 167 667 59 HOH HOH . D 3 HOH A 168 668 125 HOH HOH . D 3 HOH A 169 669 108 HOH HOH . D 3 HOH A 170 670 87 HOH HOH . D 3 HOH A 171 671 22 HOH HOH . D 3 HOH A 172 672 153 HOH HOH . D 3 HOH A 173 673 208 HOH HOH . D 3 HOH A 174 674 89 HOH HOH . D 3 HOH A 175 675 118 HOH HOH . D 3 HOH A 176 676 198 HOH HOH . D 3 HOH A 177 677 127 HOH HOH . D 3 HOH A 178 678 180 HOH HOH . D 3 HOH A 179 679 160 HOH HOH . D 3 HOH A 180 680 52 HOH HOH . D 3 HOH A 181 681 142 HOH HOH . D 3 HOH A 182 682 16 HOH HOH . D 3 HOH A 183 683 122 HOH HOH . D 3 HOH A 184 684 147 HOH HOH . D 3 HOH A 185 685 95 HOH HOH . D 3 HOH A 186 686 190 HOH HOH . D 3 HOH A 187 687 111 HOH HOH . D 3 HOH A 188 688 129 HOH HOH . D 3 HOH A 189 689 121 HOH HOH . D 3 HOH A 190 690 187 HOH HOH . D 3 HOH A 191 691 197 HOH HOH . D 3 HOH A 192 692 161 HOH HOH . D 3 HOH A 193 693 114 HOH HOH . D 3 HOH A 194 694 35 HOH HOH . D 3 HOH A 195 695 91 HOH HOH . D 3 HOH A 196 696 199 HOH HOH . D 3 HOH A 197 697 192 HOH HOH . D 3 HOH A 198 698 144 HOH HOH . D 3 HOH A 199 699 94 HOH HOH . D 3 HOH A 200 700 149 HOH HOH . D 3 HOH A 201 701 135 HOH HOH . D 3 HOH A 202 702 173 HOH HOH . D 3 HOH A 203 703 182 HOH HOH . D 3 HOH A 204 704 152 HOH HOH . D 3 HOH A 205 705 176 HOH HOH . D 3 HOH A 206 706 188 HOH HOH . D 3 HOH A 207 707 109 HOH HOH . D 3 HOH A 208 708 204 HOH HOH . D 3 HOH A 209 709 158 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 34.356 _atom_site.Cartn_y 14.239 _atom_site.Cartn_z 42.769 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.62 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #