data_6IS6 # _model_server_result.job_id i96sQ7B1WqFu88oFJqusNA _model_server_result.datetime_utc '2024-11-24 03:46:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6is6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":308}' # _entry.id 6IS6 # _exptl.entry_id 6IS6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IS6 _cell.length_a 51.98 _cell.length_b 109.35 _cell.length_c 107.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IS6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 53.96 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 O N N ? 2 P N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 244 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 238 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id N _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 313 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.248 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 237 n n C10 C9 OLC doub 238 n n C10 C11 OLC sing 239 n n C9 C8 OLC sing 240 n n C17 C16 OLC sing 241 z n C11 C12 OLC sing 242 n n C8 C7 OLC sing 243 n n C24 C22 OLC sing 244 n n C24 O25 OLC sing 245 n n C16 C15 OLC sing 246 n n C12 C13 OLC sing 247 n n C7 C6 OLC sing 248 n n C15 C14 OLC sing 249 n n C13 C14 OLC sing 250 n n C6 C5 OLC sing 251 n n C5 C4 OLC sing 252 n n C4 C3 OLC sing 253 n n C3 C2 OLC sing 254 n n C2 C1 OLC sing 255 n n C21 C22 OLC sing 256 n n C21 O20 OLC sing 257 n n C1 O19 OLC doub 258 n n C1 O20 OLC sing 259 n n C22 O23 OLC sing 260 n n C18 H18 OLC sing 261 n n C18 H18A OLC sing 262 n n C18 H18B OLC sing 263 n n C10 H10 OLC sing 264 n n C9 H9 OLC sing 265 n n C17 H17 OLC sing 266 n n C17 H17A OLC sing 267 n n C11 H11 OLC sing 268 n n C11 H11A OLC sing 269 n n C8 H8 OLC sing 270 n n C8 H8A OLC sing 271 n n C24 H24 OLC sing 272 n n C24 H24A OLC sing 273 n n C16 H16 OLC sing 274 n n C16 H16A OLC sing 275 n n C12 H12 OLC sing 276 n n C12 H12A OLC sing 277 n n C7 H7 OLC sing 278 n n C7 H7A OLC sing 279 n n C15 H15 OLC sing 280 n n C15 H15A OLC sing 281 n n C13 H13 OLC sing 282 n n C13 H13A OLC sing 283 n n C6 H6 OLC sing 284 n n C6 H6A OLC sing 285 n n C14 H14 OLC sing 286 n n C14 H14A OLC sing 287 n n C5 H5 OLC sing 288 n n C5 H5A OLC sing 289 n n C4 H4 OLC sing 290 n n C4 H4A OLC sing 291 n n C3 H3 OLC sing 292 n n C3 H3A OLC sing 293 n n C2 H2 OLC sing 294 n n C2 H2A OLC sing 295 n n C21 H21 OLC sing 296 n n C21 H21A OLC sing 297 n n C22 H22 OLC sing 298 n n O25 HO25 OLC sing 299 n n O23 HO23 OLC sing 300 n n # _atom_sites.entry_id 6IS6 _atom_sites.fract_transf_matrix[1][1] 0.019238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009145 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLC A 1 301 301 OLC OLC . C 2 OLC A 1 302 401 OLC OLC . D 2 OLC A 1 303 501 OLC OLC . E 2 OLC A 1 304 601 OLC OLC . F 2 OLC A 1 305 701 OLC OLC . G 2 OLC A 1 306 801 OLC OLC . H 2 OLC A 1 307 901 OLC OLC . I 2 OLC A 1 308 1001 OLC OLC . J 2 OLC A 1 309 1101 OLC OLC . K 2 OLC A 1 310 1201 OLC OLC . L 2 OLC A 1 311 1301 OLC OLC . M 2 OLC A 1 312 1401 OLC OLC . N 3 RET A 1 313 1501 RET RET . O 2 OLC A 1 314 101 OLC OLC . P 2 OLC A 1 315 102 OLC OLC . Q 4 HOH A 1 401 8 HOH HOH . Q 4 HOH A 2 402 40 HOH HOH . Q 4 HOH A 3 403 11 HOH HOH . Q 4 HOH A 4 404 14 HOH HOH . Q 4 HOH A 5 405 7 HOH HOH . Q 4 HOH A 6 406 9 HOH HOH . Q 4 HOH A 7 407 10 HOH HOH . Q 4 HOH A 8 408 5 HOH HOH . Q 4 HOH A 9 409 12 HOH HOH . Q 4 HOH A 10 410 22 HOH HOH . Q 4 HOH A 11 411 4 HOH HOH . Q 4 HOH A 12 412 25 HOH HOH . Q 4 HOH A 13 413 2 HOH HOH . Q 4 HOH A 14 414 39 HOH HOH . Q 4 HOH A 15 415 13 HOH HOH . Q 4 HOH A 16 416 1 HOH HOH . Q 4 HOH A 17 417 16 HOH HOH . Q 4 HOH A 18 418 34 HOH HOH . Q 4 HOH A 19 419 3 HOH HOH . Q 4 HOH A 20 420 21 HOH HOH . Q 4 HOH A 21 421 15 HOH HOH . Q 4 HOH A 22 422 19 HOH HOH . Q 4 HOH A 23 423 20 HOH HOH . Q 4 HOH A 24 424 6 HOH HOH . Q 4 HOH A 25 425 30 HOH HOH . Q 4 HOH A 26 426 18 HOH HOH . Q 4 HOH A 27 427 26 HOH HOH . Q 4 HOH A 28 428 23 HOH HOH . Q 4 HOH A 29 429 24 HOH HOH . Q 4 HOH A 30 430 41 HOH HOH . Q 4 HOH A 31 431 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . I 2 9.742 -31.191 27.265 1 55.3 ? C18 OLC 308 A 1 HETATM 2 C C10 OLC . . . I 2 11.475 -25.067 22.006 1 47.87 ? C10 OLC 308 A 1 HETATM 3 C C9 OLC . . . I 2 12.169 -23.93 22.006 1 48.35 ? C9 OLC 308 A 1 HETATM 4 C C17 OLC . . . I 2 10.311 -31.252 25.852 1 53.33 ? C17 OLC 308 A 1 HETATM 5 C C11 OLC . . . I 2 11.615 -26.065 20.874 1 53.53 ? C11 OLC 308 A 1 HETATM 6 C C8 OLC . . . I 2 13.119 -23.656 20.866 1 57.75 ? C8 OLC 308 A 1 HETATM 7 C C24 OLC . . . I 2 14.567 -12.507 20.66 1 58.1 ? C24 OLC 308 A 1 HETATM 8 C C16 OLC . . . I 2 10.396 -29.849 25.26 1 50.59 ? C16 OLC 308 A 1 HETATM 9 C C12 OLC . . . I 2 11.178 -27.448 21.342 1 48.27 ? C12 OLC 308 A 1 HETATM 10 C C7 OLC . . . I 2 12.408 -22.905 19.748 1 56.69 ? C7 OLC 308 A 1 HETATM 11 C C15 OLC . . . I 2 11.053 -29.746 23.884 1 43.59 ? C15 OLC 308 A 1 HETATM 12 C C13 OLC . . . I 2 12.154 -27.998 22.375 1 49.58 ? C13 OLC 308 A 1 HETATM 13 C C6 OLC . . . I 2 12.386 -21.401 19.988 1 55.45 ? C6 OLC 308 A 1 HETATM 14 C C14 OLC . . . I 2 11.439 -28.28 23.689 1 49.35 ? C14 OLC 308 A 1 HETATM 15 C C5 OLC . . . I 2 12.336 -20.703 18.629 1 51.42 ? C5 OLC 308 A 1 HETATM 16 C C4 OLC . . . I 2 12.856 -19.275 18.712 1 45.44 ? C4 OLC 308 A 1 HETATM 17 C C3 OLC . . . I 2 11.768 -18.368 19.262 1 47.85 ? C3 OLC 308 A 1 HETATM 18 C C2 OLC . . . I 2 12.325 -17.217 20.094 1 49.58 ? C2 OLC 308 A 1 HETATM 19 C C21 OLC . . . I 2 14.242 -14.177 18.851 1 52.85 ? C21 OLC 308 A 1 HETATM 20 C C1 OLC . . . I 2 12.743 -16.102 19.171 1 51.05 ? C1 OLC 308 A 1 HETATM 21 C C22 OLC . . . I 2 14.084 -12.713 19.224 1 54.82 ? C22 OLC 308 A 1 HETATM 22 O O19 OLC . . . I 2 12.568 -16.181 17.965 1 52.16 ? O19 OLC 308 A 1 HETATM 23 O O25 OLC . . . I 2 13.788 -13.296 21.582 1 57.86 ? O25 OLC 308 A 1 HETATM 24 O O23 OLC . . . I 2 14.826 -11.917 18.292 1 59.43 ? O23 OLC 308 A 1 HETATM 25 O O20 OLC . . . I 2 13.386 -14.921 19.709 1 51.54 ? O20 OLC 308 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #