data_6ISE # _model_server_result.job_id iMklPp_3KaIRZgE4_fUmmw _model_server_result.datetime_utc '2024-11-24 21:58:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ise # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":403}' # _entry.id 6ISE # _exptl.entry_id 6ISE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.04 _cell.angle_gamma 90 _cell.entry_id 6ISE _cell.length_a 89.877 _cell.length_b 95.594 _cell.length_c 93.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ISE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 6ISE _atom_sites.fract_transf_matrix[1][1] 0.011126 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000007 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010461 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 B 1 401 3 SO4 SO4 . D 2 SO4 B 1 402 4 SO4 SO4 . E 3 ANP B 1 403 1 ANP ANP . F 2 SO4 A 1 401 1 SO4 SO4 . G 2 SO4 A 1 402 2 SO4 SO4 . H 3 ANP A 1 403 2 ANP ANP . I 4 EDO A 1 404 1 EDO EDO . J 5 HOH B 1 501 2 HOH HOH . J 5 HOH B 2 502 5 HOH HOH . J 5 HOH B 3 503 8 HOH HOH . J 5 HOH B 4 504 3 HOH HOH . J 5 HOH B 5 505 7 HOH HOH . K 5 HOH A 1 501 6 HOH HOH . K 5 HOH A 2 502 1 HOH HOH . K 5 HOH A 3 503 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . H 3 9.05 -13.159 41.184 1 70.21 ? PG ANP 403 A 1 HETATM 2 O O1G ANP . . . H 3 10.228 -13.28 40.231 1 65.67 ? O1G ANP 403 A 1 HETATM 3 O O2G ANP . . . H 3 9.56 -13.347 42.6 1 57.35 ? O2G ANP 403 A 1 HETATM 4 O O3G ANP . . . H 3 8.013 -14.176 40.793 1 67.89 ? O3G ANP 403 A 1 HETATM 5 P PB ANP . . . H 3 8.718 -10.314 41.957 1 67.18 ? PB ANP 403 A 1 HETATM 6 O O1B ANP . . . H 3 7.494 -9.537 42.326 1 65.76 ? O1B ANP 403 A 1 HETATM 7 O O2B ANP . . . H 3 9.645 -10.726 43.065 1 63.34 ? O2B ANP 403 A 1 HETATM 8 N N3B ANP . . . H 3 8.368 -11.655 41.063 1 70.94 ? N3B ANP 403 A 1 HETATM 9 P PA ANP . . . H 3 10.652 -9.372 39.915 1 73.39 ? PA ANP 403 A 1 HETATM 10 O O1A ANP . . . H 3 10.748 -10.796 39.475 1 73.01 ? O1A ANP 403 A 1 HETATM 11 O O2A ANP . . . H 3 11.885 -8.646 40.327 1 63.64 ? O2A ANP 403 A 1 HETATM 12 O O3A ANP . . . H 3 9.523 -9.236 41.059 1 72.76 ? O3A ANP 403 A 1 HETATM 13 O O5' ANP . . . H 3 10 -8.515 38.749 1 61.95 ? O5' ANP 403 A 1 HETATM 14 C C5' ANP . . . H 3 8.866 -9.044 38.085 1 64.51 ? C5' ANP 403 A 1 HETATM 15 C C4' ANP . . . H 3 9.082 -8.739 36.641 1 65.4 ? C4' ANP 403 A 1 HETATM 16 O O4' ANP . . . H 3 9.341 -7.322 36.534 1 71.27 ? O4' ANP 403 A 1 HETATM 17 C C3' ANP . . . H 3 10.32 -9.413 36.064 1 70.28 ? C3' ANP 403 A 1 HETATM 18 O O3' ANP . . . H 3 9.914 -10.621 35.447 1 72.62 ? O3' ANP 403 A 1 HETATM 19 C C2' ANP . . . H 3 10.808 -8.404 35.027 1 68.04 ? C2' ANP 403 A 1 HETATM 20 O O2' ANP . . . H 3 10.283 -8.689 33.755 1 68.95 ? O2' ANP 403 A 1 HETATM 21 C C1' ANP . . . H 3 10.267 -7.067 35.506 1 67.87 ? C1' ANP 403 A 1 HETATM 22 N N9 ANP . . . H 3 11.408 -6.345 36.011 1 62.23 ? N9 ANP 403 A 1 HETATM 23 C C8 ANP . . . H 3 11.908 -6.439 37.282 1 60.3 ? C8 ANP 403 A 1 HETATM 24 N N7 ANP . . . H 3 13.01 -5.745 37.432 1 59.23 ? N7 ANP 403 A 1 HETATM 25 C C5 ANP . . . H 3 13.274 -5.2 36.18 1 58.81 ? C5 ANP 403 A 1 HETATM 26 C C6 ANP . . . H 3 14.313 -4.369 35.7 1 54.42 ? C6 ANP 403 A 1 HETATM 27 N N6 ANP . . . H 3 15.324 -3.956 36.458 1 49.81 ? N6 ANP 403 A 1 HETATM 28 N N1 ANP . . . H 3 14.286 -4.013 34.39 1 51.95 ? N1 ANP 403 A 1 HETATM 29 C C2 ANP . . . H 3 13.251 -4.437 33.647 1 52.82 ? C2 ANP 403 A 1 HETATM 30 N N3 ANP . . . H 3 12.22 -5.211 33.996 1 52.05 ? N3 ANP 403 A 1 HETATM 31 C C4 ANP . . . H 3 12.289 -5.573 35.289 1 56.04 ? C4 ANP 403 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #