data_6ISL
#
_model_server_result.job_id            mX1mukgfRgHJE7CwTxv97Q 
_model_server_result.datetime_utc      '2024-11-04 22:44:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6isl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    6ISL 
#
_exptl.entry_id    6ISL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              290.354 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R,3S)-2-methyl-2-(4-methylpent-3-enyl)-3-oxidanyl-3,4-dihydrochromene-6-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6ISL 
_cell.length_a            80.22 
_cell.length_b            80.22 
_cell.length_c            112.2 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ISL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 40.11 69.472558 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H22 O4' 
_chem_comp.formula_weight    290.354 
_chem_comp.id                XIA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R,3S)-2-methyl-2-(4-methylpent-3-enyl)-3-oxidanyl-3,4-dihydrochromene-6-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'xiamenmycin B' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C9 XIA sing 363 n n 
C9 C17 XIA sing 364 n n 
C9 O10 XIA sing 365 n n 
C9 C8 XIA sing 366 n n 
C17 C18 XIA sing 367 n n 
O16 C8 XIA sing 368 n n 
O10 C3 XIA sing 369 n n 
C7 C8 XIA sing 370 n n 
C7 C4 XIA sing 371 n n 
C3 C4 XIA doub 372 n y 
C3 C2 XIA sing 373 n y 
C4 C5 XIA sing 374 n y 
C19 C18 XIA sing 375 n n 
C19 C21 XIA doub 376 n n 
C2 C1 XIA doub 377 n y 
C5 C6 XIA doub 378 n y 
C22 C21 XIA sing 379 n n 
C1 C6 XIA sing 380 n y 
C21 C23 XIA sing 381 n n 
C6 C11 XIA sing 382 n n 
C11 O39 XIA doub 383 n n 
C11 O13 XIA sing 384 n n 
O13 H1 XIA sing 385 n n 
C5 H2 XIA sing 386 n n 
C7 H3 XIA sing 387 n n 
C7 H4 XIA sing 388 n n 
C8 H5 XIA sing 389 n n 
O16 H6 XIA sing 390 n n 
C15 H7 XIA sing 391 n n 
C15 H8 XIA sing 392 n n 
C15 H9 XIA sing 393 n n 
C2 H10 XIA sing 394 n n 
C1 H11 XIA sing 395 n n 
C17 H12 XIA sing 396 n n 
C17 H13 XIA sing 397 n n 
C18 H14 XIA sing 398 n n 
C18 H15 XIA sing 399 n n 
C19 H16 XIA sing 400 n n 
C23 H17 XIA sing 401 n n 
C23 H18 XIA sing 402 n n 
C23 H19 XIA sing 403 n n 
C22 H20 XIA sing 404 n n 
C22 H21 XIA sing 405 n n 
C22 H22 XIA sing 406 n n 
#
_atom_sites.entry_id                     6ISL 
_atom_sites.fract_transf_matrix[1][1]    0.012466 
_atom_sites.fract_transf_matrix[1][2]    0.007197 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014394 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008913 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 XIA A 1 201 1 XIA xia . 
D 2 XIA B 1 201 1 XIA xia . 
E 3 HOH A 1 301 2 HOH HOH . 
E 3 HOH A 2 302 41 HOH HOH . 
E 3 HOH A 3 303 25 HOH HOH . 
E 3 HOH A 4 304 53 HOH HOH . 
E 3 HOH A 5 305 44 HOH HOH . 
E 3 HOH A 6 306 65 HOH HOH . 
E 3 HOH A 7 307 50 HOH HOH . 
E 3 HOH A 8 308 22 HOH HOH . 
E 3 HOH A 9 309 34 HOH HOH . 
E 3 HOH A 10 310 9 HOH HOH . 
E 3 HOH A 11 311 56 HOH HOH . 
E 3 HOH A 12 312 13 HOH HOH . 
E 3 HOH A 13 313 19 HOH HOH . 
E 3 HOH A 14 314 6 HOH HOH . 
E 3 HOH A 15 315 37 HOH HOH . 
E 3 HOH A 16 316 24 HOH HOH . 
E 3 HOH A 17 317 17 HOH HOH . 
E 3 HOH A 18 318 26 HOH HOH . 
E 3 HOH A 19 319 35 HOH HOH . 
E 3 HOH A 20 320 28 HOH HOH . 
E 3 HOH A 21 321 21 HOH HOH . 
E 3 HOH A 22 322 8 HOH HOH . 
E 3 HOH A 23 323 32 HOH HOH . 
E 3 HOH A 24 324 33 HOH HOH . 
E 3 HOH A 25 325 48 HOH HOH . 
E 3 HOH A 26 326 38 HOH HOH . 
E 3 HOH A 27 327 64 HOH HOH . 
E 3 HOH A 28 328 42 HOH HOH . 
E 3 HOH A 29 329 61 HOH HOH . 
E 3 HOH A 30 330 66 HOH HOH . 
E 3 HOH A 31 331 63 HOH HOH . 
E 3 HOH A 32 332 57 HOH HOH . 
E 3 HOH A 33 333 58 HOH HOH . 
E 3 HOH A 34 334 59 HOH HOH . 
F 3 HOH B 1 301 3 HOH HOH . 
F 3 HOH B 2 302 14 HOH HOH . 
F 3 HOH B 3 303 62 HOH HOH . 
F 3 HOH B 4 304 47 HOH HOH . 
F 3 HOH B 5 305 40 HOH HOH . 
F 3 HOH B 6 306 30 HOH HOH . 
F 3 HOH B 7 307 60 HOH HOH . 
F 3 HOH B 8 308 27 HOH HOH . 
F 3 HOH B 9 309 7 HOH HOH . 
F 3 HOH B 10 310 18 HOH HOH . 
F 3 HOH B 11 311 12 HOH HOH . 
F 3 HOH B 12 312 45 HOH HOH . 
F 3 HOH B 13 313 15 HOH HOH . 
F 3 HOH B 14 314 5 HOH HOH . 
F 3 HOH B 15 315 10 HOH HOH . 
F 3 HOH B 16 316 54 HOH HOH . 
F 3 HOH B 17 317 29 HOH HOH . 
F 3 HOH B 18 318 52 HOH HOH . 
F 3 HOH B 19 319 16 HOH HOH . 
F 3 HOH B 20 320 39 HOH HOH . 
F 3 HOH B 21 321 23 HOH HOH . 
F 3 HOH B 22 322 31 HOH HOH . 
F 3 HOH B 23 323 51 HOH HOH . 
F 3 HOH B 24 324 55 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O39 XIA . . . D 2 -9.645 16.122 49.532 1 23.64 ? O39 XIA 201 B 1 
HETATM 2 C C11 XIA . . . D 2 -8.866 15.358 50.282 1 22.79 ? C11 XIA 201 B 1 
HETATM 3 O O13 XIA . . . D 2 -8.723 14.16 50.029 1 25.47 ? O13 XIA 201 B 1 
HETATM 4 C C6 XIA . . . D 2 -7.882 15.991 51.182 1 20.35 ? C6 XIA 201 B 1 
HETATM 5 C C5 XIA . . . D 2 -6.844 15.201 51.703 1 19.22 ? C5 XIA 201 B 1 
HETATM 6 C C4 XIA . . . D 2 -5.873 15.829 52.455 1 17.31 ? C4 XIA 201 B 1 
HETATM 7 C C7 XIA . . . D 2 -4.721 15.075 53.054 1 18.45 ? C7 XIA 201 B 1 
HETATM 8 C C8 XIA . . . D 2 -3.517 15.996 53.006 1 16.99 ? C8 XIA 201 B 1 
HETATM 9 O O16 XIA . . . D 2 -2.352 15.368 53.598 1 17.55 ? O16 XIA 201 B 1 
HETATM 10 C C9 XIA . . . D 2 -3.823 17.326 53.728 1 17.66 ? C9 XIA 201 B 1 
HETATM 11 C C15 XIA . . . D 2 -4.235 17.067 55.204 1 18.83 ? C15 XIA 201 B 1 
HETATM 12 O O10 XIA . . . D 2 -4.953 17.957 53.192 1 17.5 ? O10 XIA 201 B 1 
HETATM 13 C C3 XIA . . . D 2 -5.927 17.279 52.567 1 16.66 ? C3 XIA 201 B 1 
HETATM 14 C C2 XIA . . . D 2 -6.947 17.998 52.049 1 17.7 ? C2 XIA 201 B 1 
HETATM 15 C C1 XIA . . . D 2 -7.922 17.38 51.316 1 16.27 ? C1 XIA 201 B 1 
HETATM 16 C C17 XIA . . . D 2 -2.605 18.25 53.616 1 18.33 ? C17 XIA 201 B 1 
HETATM 17 C C18 XIA . . . D 2 -2.179 18.62 52.165 1 20.18 ? C18 XIA 201 B 1 
HETATM 18 C C19 XIA . . . D 2 -0.778 19.294 52.22 1 23.05 ? C19 XIA 201 B 1 
HETATM 19 C C21 XIA . . . D 2 -0.208 19.974 51.17 1 24.49 ? C21 XIA 201 B 1 
HETATM 20 C C23 XIA . . . D 2 -0.862 20.275 49.85 1 24.87 ? C23 XIA 201 B 1 
HETATM 21 C C22 XIA . . . D 2 1.169 20.522 51.368 1 24.06 ? C22 XIA 201 B 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           21 
#