data_6ITK
#
_model_server_result.job_id            6JBQktdQgWcVeX8GbYt5jg 
_model_server_result.datetime_utc      '2024-11-09 02:35:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6itk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":500}' 
#
_entry.id    6ITK 
#
_exptl.entry_id    6ITK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              134.087 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-hydroxybutanedioic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.31 
_cell.angle_gamma         90 
_cell.entry_id            6ITK 
_cell.length_a            102.931 
_cell.length_b            116.94 
_cell.length_c            66.003 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ITK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C4 H6 O5' 
_chem_comp.formula_weight    134.087 
_chem_comp.id                LMR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-hydroxybutanedioic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     L-Malate 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1A LMR doub 181 n n 
C1 O1B LMR sing 182 n n 
C1 C2 LMR sing 183 n n 
C2 O2 LMR sing 184 n n 
C2 C3 LMR sing 185 n n 
C3 C4 LMR sing 186 n n 
C4 O4A LMR sing 187 n n 
C4 O4B LMR doub 188 n n 
C2 H2 LMR sing 189 n n 
O2 HO2 LMR sing 190 n n 
C3 H3 LMR sing 191 n n 
C3 H3A LMR sing 192 n n 
O1B H4 LMR sing 193 n n 
O4A H5 LMR sing 194 n n 
#
_atom_sites.entry_id                     6ITK 
_atom_sites.fract_transf_matrix[1][1]    0.009715 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000903 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008551 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015216 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 LMR A 1 500 500 LMR LMR . 
D 3 NAD A 1 501 501 NAD NAD . 
E 2 LMR B 1 500 500 LMR LMR . 
F 3 NAD B 1 501 501 NAD NAD . 
G 4 HOH A 1 601 235 HOH HOH . 
G 4 HOH A 2 602 219 HOH HOH . 
G 4 HOH A 3 603 207 HOH HOH . 
G 4 HOH A 4 604 194 HOH HOH . 
G 4 HOH A 5 605 135 HOH HOH . 
G 4 HOH A 6 606 97 HOH HOH . 
G 4 HOH A 7 607 80 HOH HOH . 
G 4 HOH A 8 608 205 HOH HOH . 
G 4 HOH A 9 609 114 HOH HOH . 
G 4 HOH A 10 610 41 HOH HOH . 
G 4 HOH A 11 611 181 HOH HOH . 
G 4 HOH A 12 612 35 HOH HOH . 
G 4 HOH A 13 613 130 HOH HOH . 
G 4 HOH A 14 614 139 HOH HOH . 
G 4 HOH A 15 615 225 HOH HOH . 
G 4 HOH A 16 616 22 HOH HOH . 
G 4 HOH A 17 617 118 HOH HOH . 
G 4 HOH A 18 618 128 HOH HOH . 
G 4 HOH A 19 619 116 HOH HOH . 
G 4 HOH A 20 620 115 HOH HOH . 
G 4 HOH A 21 621 38 HOH HOH . 
G 4 HOH A 22 622 58 HOH HOH . 
G 4 HOH A 23 623 26 HOH HOH . 
G 4 HOH A 24 624 9 HOH HOH . 
G 4 HOH A 25 625 191 HOH HOH . 
G 4 HOH A 26 626 69 HOH HOH . 
G 4 HOH A 27 627 109 HOH HOH . 
G 4 HOH A 28 628 68 HOH HOH . 
G 4 HOH A 29 629 151 HOH HOH . 
G 4 HOH A 30 630 56 HOH HOH . 
G 4 HOH A 31 631 98 HOH HOH . 
G 4 HOH A 32 632 63 HOH HOH . 
G 4 HOH A 33 633 87 HOH HOH . 
G 4 HOH A 34 634 81 HOH HOH . 
G 4 HOH A 35 635 197 HOH HOH . 
G 4 HOH A 36 636 147 HOH HOH . 
G 4 HOH A 37 637 157 HOH HOH . 
G 4 HOH A 38 638 196 HOH HOH . 
G 4 HOH A 39 639 89 HOH HOH . 
G 4 HOH A 40 640 125 HOH HOH . 
G 4 HOH A 41 641 140 HOH HOH . 
G 4 HOH A 42 642 232 HOH HOH . 
G 4 HOH A 43 643 122 HOH HOH . 
G 4 HOH A 44 644 111 HOH HOH . 
G 4 HOH A 45 645 167 HOH HOH . 
G 4 HOH A 46 646 70 HOH HOH . 
G 4 HOH A 47 647 64 HOH HOH . 
G 4 HOH A 48 648 107 HOH HOH . 
G 4 HOH A 49 649 45 HOH HOH . 
G 4 HOH A 50 650 72 HOH HOH . 
G 4 HOH A 51 651 145 HOH HOH . 
G 4 HOH A 52 652 67 HOH HOH . 
G 4 HOH A 53 653 20 HOH HOH . 
G 4 HOH A 54 654 12 HOH HOH . 
G 4 HOH A 55 655 21 HOH HOH . 
G 4 HOH A 56 656 65 HOH HOH . 
G 4 HOH A 57 657 96 HOH HOH . 
G 4 HOH A 58 658 78 HOH HOH . 
G 4 HOH A 59 659 136 HOH HOH . 
G 4 HOH A 60 660 222 HOH HOH . 
G 4 HOH A 61 661 37 HOH HOH . 
G 4 HOH A 62 662 171 HOH HOH . 
G 4 HOH A 63 663 220 HOH HOH . 
G 4 HOH A 64 664 8 HOH HOH . 
G 4 HOH A 65 665 177 HOH HOH . 
G 4 HOH A 66 666 192 HOH HOH . 
G 4 HOH A 67 667 215 HOH HOH . 
G 4 HOH A 68 668 10 HOH HOH . 
G 4 HOH A 69 669 53 HOH HOH . 
G 4 HOH A 70 670 237 HOH HOH . 
G 4 HOH A 71 671 13 HOH HOH . 
G 4 HOH A 72 672 16 HOH HOH . 
G 4 HOH A 73 673 159 HOH HOH . 
G 4 HOH A 74 674 152 HOH HOH . 
G 4 HOH A 75 675 229 HOH HOH . 
G 4 HOH A 76 676 187 HOH HOH . 
G 4 HOH A 77 677 201 HOH HOH . 
G 4 HOH A 78 678 39 HOH HOH . 
G 4 HOH A 79 679 134 HOH HOH . 
G 4 HOH A 80 680 88 HOH HOH . 
G 4 HOH A 81 681 42 HOH HOH . 
G 4 HOH A 82 682 124 HOH HOH . 
G 4 HOH A 83 683 66 HOH HOH . 
G 4 HOH A 84 684 34 HOH HOH . 
G 4 HOH A 85 685 204 HOH HOH . 
G 4 HOH A 86 686 119 HOH HOH . 
G 4 HOH A 87 687 175 HOH HOH . 
G 4 HOH A 88 688 161 HOH HOH . 
G 4 HOH A 89 689 117 HOH HOH . 
G 4 HOH A 90 690 17 HOH HOH . 
G 4 HOH A 91 691 234 HOH HOH . 
G 4 HOH A 92 692 169 HOH HOH . 
G 4 HOH A 93 693 185 HOH HOH . 
G 4 HOH A 94 694 76 HOH HOH . 
G 4 HOH A 95 695 99 HOH HOH . 
G 4 HOH A 96 696 25 HOH HOH . 
G 4 HOH A 97 697 110 HOH HOH . 
G 4 HOH A 98 698 3 HOH HOH . 
G 4 HOH A 99 699 137 HOH HOH . 
G 4 HOH A 100 700 94 HOH HOH . 
G 4 HOH A 101 701 62 HOH HOH . 
G 4 HOH A 102 702 156 HOH HOH . 
G 4 HOH A 103 703 202 HOH HOH . 
G 4 HOH A 104 704 126 HOH HOH . 
G 4 HOH A 105 705 218 HOH HOH . 
G 4 HOH A 106 706 155 HOH HOH . 
G 4 HOH A 107 707 113 HOH HOH . 
G 4 HOH A 108 708 158 HOH HOH . 
G 4 HOH A 109 709 184 HOH HOH . 
G 4 HOH A 110 710 33 HOH HOH . 
G 4 HOH A 111 711 6 HOH HOH . 
G 4 HOH A 112 712 199 HOH HOH . 
G 4 HOH A 113 713 127 HOH HOH . 
G 4 HOH A 114 714 153 HOH HOH . 
G 4 HOH A 115 715 180 HOH HOH . 
G 4 HOH A 116 716 188 HOH HOH . 
H 4 HOH B 1 601 150 HOH HOH . 
H 4 HOH B 2 602 146 HOH HOH . 
H 4 HOH B 3 603 82 HOH HOH . 
H 4 HOH B 4 604 11 HOH HOH . 
H 4 HOH B 5 605 108 HOH HOH . 
H 4 HOH B 6 606 73 HOH HOH . 
H 4 HOH B 7 607 211 HOH HOH . 
H 4 HOH B 8 608 54 HOH HOH . 
H 4 HOH B 9 609 47 HOH HOH . 
H 4 HOH B 10 610 24 HOH HOH . 
H 4 HOH B 11 611 32 HOH HOH . 
H 4 HOH B 12 612 55 HOH HOH . 
H 4 HOH B 13 613 178 HOH HOH . 
H 4 HOH B 14 614 173 HOH HOH . 
H 4 HOH B 15 615 59 HOH HOH . 
H 4 HOH B 16 616 164 HOH HOH . 
H 4 HOH B 17 617 179 HOH HOH . 
H 4 HOH B 18 618 154 HOH HOH . 
H 4 HOH B 19 619 210 HOH HOH . 
H 4 HOH B 20 620 75 HOH HOH . 
H 4 HOH B 21 621 166 HOH HOH . 
H 4 HOH B 22 622 48 HOH HOH . 
H 4 HOH B 23 623 43 HOH HOH . 
H 4 HOH B 24 624 209 HOH HOH . 
H 4 HOH B 25 625 141 HOH HOH . 
H 4 HOH B 26 626 163 HOH HOH . 
H 4 HOH B 27 627 18 HOH HOH . 
H 4 HOH B 28 628 36 HOH HOH . 
H 4 HOH B 29 629 214 HOH HOH . 
H 4 HOH B 30 630 79 HOH HOH . 
H 4 HOH B 31 631 217 HOH HOH . 
H 4 HOH B 32 632 121 HOH HOH . 
H 4 HOH B 33 633 172 HOH HOH . 
H 4 HOH B 34 634 19 HOH HOH . 
H 4 HOH B 35 635 86 HOH HOH . 
H 4 HOH B 36 636 95 HOH HOH . 
H 4 HOH B 37 637 193 HOH HOH . 
H 4 HOH B 38 638 189 HOH HOH . 
H 4 HOH B 39 639 160 HOH HOH . 
H 4 HOH B 40 640 129 HOH HOH . 
H 4 HOH B 41 641 208 HOH HOH . 
H 4 HOH B 42 642 206 HOH HOH . 
H 4 HOH B 43 643 103 HOH HOH . 
H 4 HOH B 44 644 2 HOH HOH . 
H 4 HOH B 45 645 105 HOH HOH . 
H 4 HOH B 46 646 143 HOH HOH . 
H 4 HOH B 47 647 49 HOH HOH . 
H 4 HOH B 48 648 132 HOH HOH . 
H 4 HOH B 49 649 61 HOH HOH . 
H 4 HOH B 50 650 138 HOH HOH . 
H 4 HOH B 51 651 183 HOH HOH . 
H 4 HOH B 52 652 223 HOH HOH . 
H 4 HOH B 53 653 100 HOH HOH . 
H 4 HOH B 54 654 77 HOH HOH . 
H 4 HOH B 55 655 90 HOH HOH . 
H 4 HOH B 56 656 46 HOH HOH . 
H 4 HOH B 57 657 213 HOH HOH . 
H 4 HOH B 58 658 221 HOH HOH . 
H 4 HOH B 59 659 101 HOH HOH . 
H 4 HOH B 60 660 40 HOH HOH . 
H 4 HOH B 61 661 106 HOH HOH . 
H 4 HOH B 62 662 71 HOH HOH . 
H 4 HOH B 63 663 186 HOH HOH . 
H 4 HOH B 64 664 148 HOH HOH . 
H 4 HOH B 65 665 57 HOH HOH . 
H 4 HOH B 66 666 104 HOH HOH . 
H 4 HOH B 67 667 190 HOH HOH . 
H 4 HOH B 68 668 168 HOH HOH . 
H 4 HOH B 69 669 231 HOH HOH . 
H 4 HOH B 70 670 30 HOH HOH . 
H 4 HOH B 71 671 238 HOH HOH . 
H 4 HOH B 72 672 230 HOH HOH . 
H 4 HOH B 73 673 44 HOH HOH . 
H 4 HOH B 74 674 28 HOH HOH . 
H 4 HOH B 75 675 182 HOH HOH . 
H 4 HOH B 76 676 224 HOH HOH . 
H 4 HOH B 77 677 74 HOH HOH . 
H 4 HOH B 78 678 144 HOH HOH . 
H 4 HOH B 79 679 92 HOH HOH . 
H 4 HOH B 80 680 15 HOH HOH . 
H 4 HOH B 81 681 131 HOH HOH . 
H 4 HOH B 82 682 165 HOH HOH . 
H 4 HOH B 83 683 14 HOH HOH . 
H 4 HOH B 84 684 174 HOH HOH . 
H 4 HOH B 85 685 228 HOH HOH . 
H 4 HOH B 86 686 142 HOH HOH . 
H 4 HOH B 87 687 120 HOH HOH . 
H 4 HOH B 88 688 83 HOH HOH . 
H 4 HOH B 89 689 5 HOH HOH . 
H 4 HOH B 90 690 123 HOH HOH . 
H 4 HOH B 91 691 162 HOH HOH . 
H 4 HOH B 92 692 112 HOH HOH . 
H 4 HOH B 93 693 195 HOH HOH . 
H 4 HOH B 94 694 203 HOH HOH . 
H 4 HOH B 95 695 226 HOH HOH . 
H 4 HOH B 96 696 85 HOH HOH . 
H 4 HOH B 97 697 93 HOH HOH . 
H 4 HOH B 98 698 51 HOH HOH . 
H 4 HOH B 99 699 149 HOH HOH . 
H 4 HOH B 100 700 133 HOH HOH . 
H 4 HOH B 101 701 84 HOH HOH . 
H 4 HOH B 102 702 91 HOH HOH . 
H 4 HOH B 103 703 52 HOH HOH . 
H 4 HOH B 104 704 198 HOH HOH . 
H 4 HOH B 105 705 176 HOH HOH . 
H 4 HOH B 106 706 102 HOH HOH . 
H 4 HOH B 107 707 236 HOH HOH . 
H 4 HOH B 108 708 200 HOH HOH . 
H 4 HOH B 109 709 212 HOH HOH . 
H 4 HOH B 110 710 227 HOH HOH . 
H 4 HOH B 111 711 170 HOH HOH . 
H 4 HOH B 112 712 233 HOH HOH . 
H 4 HOH B 113 713 216 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LMR . . . E 2 24.278 12.223 5.957 1 46.06 ? C1 LMR 500 B 1 
HETATM 2 O O1A LMR . . . E 2 24.179 10.935 5.972 1 35.16 ? O1A LMR 500 B 1 
HETATM 3 O O1B LMR . . . E 2 24.743 12.899 4.999 1 47.5 ? O1B LMR 500 B 1 
HETATM 4 C C2 LMR . . . E 2 23.845 13.004 7.215 1 45.43 ? C2 LMR 500 B 1 
HETATM 5 O O2 LMR . . . E 2 23.971 14.414 7.122 1 45.3 ? O2 LMR 500 B 1 
HETATM 6 C C3 LMR . . . E 2 22.413 12.673 7.671 1 48.56 ? C3 LMR 500 B 1 
HETATM 7 C C4 LMR . . . E 2 21.333 13.168 6.727 1 53.76 ? C4 LMR 500 B 1 
HETATM 8 O O4A LMR . . . E 2 21.652 13.375 5.536 1 47.4 ? O4A LMR 500 B 1 
HETATM 9 O O4B LMR . . . E 2 20.167 13.319 7.188 1 53.51 ? O4B LMR 500 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#