data_6IV7
#
_model_server_result.job_id            qiRQ4ihZn9ySqLfeZShlDw 
_model_server_result.datetime_utc      '2024-12-03 04:25:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6iv7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    6IV7 
#
_exptl.entry_id    6IV7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              384.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYL-L-HOMOCYSTEINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.06 
_cell.angle_gamma         90 
_cell.entry_id            6IV7 
_cell.length_a            160.556 
_cell.length_b            62.225 
_cell.length_c            113.354 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6IV7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C14 H20 N6 O5 S' 
_chem_comp.formula_weight    384.411 
_chem_comp.id                SAH 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              S-ADENOSYL-L-HOMOCYSTEINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAH sing 277 n n 
N HN1 SAH sing 278 n n 
N HN2 SAH sing 279 n n 
CA CB SAH sing 280 n n 
CA C SAH sing 281 n n 
CA HA SAH sing 282 n n 
CB CG SAH sing 283 n n 
CB HB1 SAH sing 284 n n 
CB HB2 SAH sing 285 n n 
CG SD SAH sing 286 n n 
CG HG1 SAH sing 287 n n 
CG HG2 SAH sing 288 n n 
SD C5' SAH sing 289 n n 
C O SAH doub 290 n n 
C OXT SAH sing 291 n n 
OXT HXT SAH sing 292 n n 
C5' C4' SAH sing 293 n n 
C5' "H5'1" SAH sing 294 n n 
C5' "H5'2" SAH sing 295 n n 
C4' O4' SAH sing 296 n n 
C4' C3' SAH sing 297 n n 
C4' H4' SAH sing 298 n n 
O4' C1' SAH sing 299 n n 
C3' O3' SAH sing 300 n n 
C3' C2' SAH sing 301 n n 
C3' H3' SAH sing 302 n n 
O3' HO3' SAH sing 303 n n 
C2' O2' SAH sing 304 n n 
C2' C1' SAH sing 305 n n 
C2' H2' SAH sing 306 n n 
O2' HO2' SAH sing 307 n n 
C1' N9 SAH sing 308 n n 
C1' H1' SAH sing 309 n n 
N9 C8 SAH sing 310 n y 
N9 C4 SAH sing 311 n y 
C8 N7 SAH doub 312 n y 
C8 H8 SAH sing 313 n n 
N7 C5 SAH sing 314 n y 
C5 C6 SAH sing 315 n y 
C5 C4 SAH doub 316 n y 
C6 N6 SAH sing 317 n n 
C6 N1 SAH doub 318 n y 
N6 HN61 SAH sing 319 n n 
N6 HN62 SAH sing 320 n n 
N1 C2 SAH sing 321 n y 
C2 N3 SAH doub 322 n y 
C2 H2 SAH sing 323 n n 
N3 C4 SAH sing 324 n y 
#
_atom_sites.entry_id                     6IV7 
_atom_sites.fract_transf_matrix[1][1]    0.006228 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002651 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016071 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009588 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SAH A 1 401 389 SAH SAH . 
D 2 SAH B 1 401 389 SAH SAH . 
E 3 HOH A 1 501 186 HOH HOH . 
E 3 HOH A 2 502 12 HOH HOH . 
E 3 HOH A 3 503 90 HOH HOH . 
E 3 HOH A 4 504 43 HOH HOH . 
E 3 HOH A 5 505 44 HOH HOH . 
E 3 HOH A 6 506 125 HOH HOH . 
E 3 HOH A 7 507 20 HOH HOH . 
E 3 HOH A 8 508 15 HOH HOH . 
E 3 HOH A 9 509 85 HOH HOH . 
E 3 HOH A 10 510 36 HOH HOH . 
E 3 HOH A 11 511 147 HOH HOH . 
E 3 HOH A 12 512 45 HOH HOH . 
E 3 HOH A 13 513 67 HOH HOH . 
E 3 HOH A 14 514 145 HOH HOH . 
E 3 HOH A 15 515 26 HOH HOH . 
E 3 HOH A 16 516 116 HOH HOH . 
E 3 HOH A 17 517 105 HOH HOH . 
E 3 HOH A 18 518 57 HOH HOH . 
E 3 HOH A 19 519 28 HOH HOH . 
E 3 HOH A 20 520 3 HOH HOH . 
E 3 HOH A 21 521 39 HOH HOH . 
E 3 HOH A 22 522 74 HOH HOH . 
E 3 HOH A 23 523 71 HOH HOH . 
E 3 HOH A 24 524 46 HOH HOH . 
E 3 HOH A 25 525 64 HOH HOH . 
E 3 HOH A 26 526 127 HOH HOH . 
E 3 HOH A 27 527 170 HOH HOH . 
E 3 HOH A 28 528 109 HOH HOH . 
E 3 HOH A 29 529 89 HOH HOH . 
E 3 HOH A 30 530 58 HOH HOH . 
E 3 HOH A 31 531 10 HOH HOH . 
E 3 HOH A 32 532 76 HOH HOH . 
E 3 HOH A 33 533 151 HOH HOH . 
E 3 HOH A 34 534 172 HOH HOH . 
E 3 HOH A 35 535 40 HOH HOH . 
E 3 HOH A 36 536 49 HOH HOH . 
E 3 HOH A 37 537 73 HOH HOH . 
E 3 HOH A 38 538 27 HOH HOH . 
E 3 HOH A 39 539 129 HOH HOH . 
E 3 HOH A 40 540 153 HOH HOH . 
E 3 HOH A 41 541 121 HOH HOH . 
E 3 HOH A 42 542 17 HOH HOH . 
E 3 HOH A 43 543 54 HOH HOH . 
E 3 HOH A 44 544 2 HOH HOH . 
E 3 HOH A 45 545 165 HOH HOH . 
E 3 HOH A 46 546 88 HOH HOH . 
E 3 HOH A 47 547 94 HOH HOH . 
E 3 HOH A 48 548 38 HOH HOH . 
E 3 HOH A 49 549 133 HOH HOH . 
E 3 HOH A 50 550 167 HOH HOH . 
E 3 HOH A 51 551 1 HOH HOH . 
E 3 HOH A 52 552 124 HOH HOH . 
E 3 HOH A 53 553 34 HOH HOH . 
E 3 HOH A 54 554 31 HOH HOH . 
E 3 HOH A 55 555 59 HOH HOH . 
E 3 HOH A 56 556 166 HOH HOH . 
E 3 HOH A 57 557 182 HOH HOH . 
E 3 HOH A 58 558 19 HOH HOH . 
E 3 HOH A 59 559 142 HOH HOH . 
E 3 HOH A 60 560 185 HOH HOH . 
E 3 HOH A 61 561 86 HOH HOH . 
E 3 HOH A 62 562 92 HOH HOH . 
E 3 HOH A 63 563 141 HOH HOH . 
E 3 HOH A 64 564 6 HOH HOH . 
E 3 HOH A 65 565 119 HOH HOH . 
E 3 HOH A 66 566 14 HOH HOH . 
E 3 HOH A 67 567 13 HOH HOH . 
E 3 HOH A 68 568 69 HOH HOH . 
E 3 HOH A 69 569 97 HOH HOH . 
E 3 HOH A 70 570 16 HOH HOH . 
E 3 HOH A 71 571 53 HOH HOH . 
E 3 HOH A 72 572 72 HOH HOH . 
E 3 HOH A 73 573 93 HOH HOH . 
E 3 HOH A 74 574 100 HOH HOH . 
E 3 HOH A 75 575 157 HOH HOH . 
E 3 HOH A 76 576 32 HOH HOH . 
E 3 HOH A 77 577 180 HOH HOH . 
E 3 HOH A 78 578 84 HOH HOH . 
E 3 HOH A 79 579 138 HOH HOH . 
E 3 HOH A 80 580 135 HOH HOH . 
E 3 HOH A 81 581 140 HOH HOH . 
E 3 HOH A 82 582 184 HOH HOH . 
E 3 HOH A 83 583 158 HOH HOH . 
E 3 HOH A 84 584 171 HOH HOH . 
E 3 HOH A 85 585 50 HOH HOH . 
E 3 HOH A 86 586 66 HOH HOH . 
E 3 HOH A 87 587 161 HOH HOH . 
E 3 HOH A 88 588 95 HOH HOH . 
E 3 HOH A 89 589 117 HOH HOH . 
E 3 HOH A 90 590 150 HOH HOH . 
E 3 HOH A 91 591 79 HOH HOH . 
E 3 HOH A 92 592 173 HOH HOH . 
E 3 HOH A 93 593 176 HOH HOH . 
F 3 HOH B 1 501 82 HOH HOH . 
F 3 HOH B 2 502 136 HOH HOH . 
F 3 HOH B 3 503 47 HOH HOH . 
F 3 HOH B 4 504 29 HOH HOH . 
F 3 HOH B 5 505 164 HOH HOH . 
F 3 HOH B 6 506 98 HOH HOH . 
F 3 HOH B 7 507 62 HOH HOH . 
F 3 HOH B 8 508 42 HOH HOH . 
F 3 HOH B 9 509 149 HOH HOH . 
F 3 HOH B 10 510 9 HOH HOH . 
F 3 HOH B 11 511 91 HOH HOH . 
F 3 HOH B 12 512 22 HOH HOH . 
F 3 HOH B 13 513 81 HOH HOH . 
F 3 HOH B 14 514 181 HOH HOH . 
F 3 HOH B 15 515 101 HOH HOH . 
F 3 HOH B 16 516 75 HOH HOH . 
F 3 HOH B 17 517 7 HOH HOH . 
F 3 HOH B 18 518 11 HOH HOH . 
F 3 HOH B 19 519 21 HOH HOH . 
F 3 HOH B 20 520 30 HOH HOH . 
F 3 HOH B 21 521 48 HOH HOH . 
F 3 HOH B 22 522 35 HOH HOH . 
F 3 HOH B 23 523 143 HOH HOH . 
F 3 HOH B 24 524 114 HOH HOH . 
F 3 HOH B 25 525 130 HOH HOH . 
F 3 HOH B 26 526 126 HOH HOH . 
F 3 HOH B 27 527 175 HOH HOH . 
F 3 HOH B 28 528 146 HOH HOH . 
F 3 HOH B 29 529 5 HOH HOH . 
F 3 HOH B 30 530 25 HOH HOH . 
F 3 HOH B 31 531 123 HOH HOH . 
F 3 HOH B 32 532 115 HOH HOH . 
F 3 HOH B 33 533 154 HOH HOH . 
F 3 HOH B 34 534 107 HOH HOH . 
F 3 HOH B 35 535 24 HOH HOH . 
F 3 HOH B 36 536 108 HOH HOH . 
F 3 HOH B 37 537 111 HOH HOH . 
F 3 HOH B 38 538 37 HOH HOH . 
F 3 HOH B 39 539 162 HOH HOH . 
F 3 HOH B 40 540 4 HOH HOH . 
F 3 HOH B 41 541 80 HOH HOH . 
F 3 HOH B 42 542 152 HOH HOH . 
F 3 HOH B 43 543 8 HOH HOH . 
F 3 HOH B 44 544 137 HOH HOH . 
F 3 HOH B 45 545 159 HOH HOH . 
F 3 HOH B 46 546 77 HOH HOH . 
F 3 HOH B 47 547 160 HOH HOH . 
F 3 HOH B 48 548 61 HOH HOH . 
F 3 HOH B 49 549 148 HOH HOH . 
F 3 HOH B 50 550 55 HOH HOH . 
F 3 HOH B 51 551 132 HOH HOH . 
F 3 HOH B 52 552 68 HOH HOH . 
F 3 HOH B 53 553 65 HOH HOH . 
F 3 HOH B 54 554 56 HOH HOH . 
F 3 HOH B 55 555 70 HOH HOH . 
F 3 HOH B 56 556 110 HOH HOH . 
F 3 HOH B 57 557 174 HOH HOH . 
F 3 HOH B 58 558 102 HOH HOH . 
F 3 HOH B 59 559 52 HOH HOH . 
F 3 HOH B 60 560 23 HOH HOH . 
F 3 HOH B 61 561 104 HOH HOH . 
F 3 HOH B 62 562 96 HOH HOH . 
F 3 HOH B 63 563 134 HOH HOH . 
F 3 HOH B 64 564 112 HOH HOH . 
F 3 HOH B 65 565 156 HOH HOH . 
F 3 HOH B 66 566 163 HOH HOH . 
F 3 HOH B 67 567 51 HOH HOH . 
F 3 HOH B 68 568 41 HOH HOH . 
F 3 HOH B 69 569 128 HOH HOH . 
F 3 HOH B 70 570 113 HOH HOH . 
F 3 HOH B 71 571 103 HOH HOH . 
F 3 HOH B 72 572 177 HOH HOH . 
F 3 HOH B 73 573 169 HOH HOH . 
F 3 HOH B 74 574 99 HOH HOH . 
F 3 HOH B 75 575 18 HOH HOH . 
F 3 HOH B 76 576 60 HOH HOH . 
F 3 HOH B 77 577 118 HOH HOH . 
F 3 HOH B 78 578 78 HOH HOH . 
F 3 HOH B 79 579 178 HOH HOH . 
F 3 HOH B 80 580 155 HOH HOH . 
F 3 HOH B 81 581 63 HOH HOH . 
F 3 HOH B 82 582 33 HOH HOH . 
F 3 HOH B 83 583 144 HOH HOH . 
F 3 HOH B 84 584 131 HOH HOH . 
F 3 HOH B 85 585 87 HOH HOH . 
F 3 HOH B 86 586 83 HOH HOH . 
F 3 HOH B 87 587 122 HOH HOH . 
F 3 HOH B 88 588 106 HOH HOH . 
F 3 HOH B 89 589 139 HOH HOH . 
F 3 HOH B 90 590 183 HOH HOH . 
F 3 HOH B 91 591 168 HOH HOH . 
F 3 HOH B 92 592 120 HOH HOH . 
F 3 HOH B 93 593 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAH . . . C 2 -10.031 22.335 39.163 1 34.28 ? N SAH 401 A 1 
HETATM 2 C CA SAH . . . C 2 -9.627 23.737 39.065 1 41.01 ? CA SAH 401 A 1 
HETATM 3 C CB SAH . . . C 2 -8.112 23.871 39.201 1 44.13 ? CB SAH 401 A 1 
HETATM 4 C CG SAH . . . C 2 -7.683 24.113 40.636 1 43.94 ? CG SAH 401 A 1 
HETATM 5 S SD SAH . . . C 2 -5.9 24.417 40.812 1 47.21 ? SD SAH 401 A 1 
HETATM 6 C C SAH . . . C 2 -10.066 24.372 37.752 1 45.93 ? C SAH 401 A 1 
HETATM 7 O O SAH . . . C 2 -9.785 23.835 36.673 1 45 ? O SAH 401 A 1 
HETATM 8 O OXT SAH . . . C 2 -10.702 25.431 37.733 1 47.61 ? OXT SAH 401 A 1 
HETATM 9 C C5' SAH . . . C 2 -5.77 23.187 42.14 1 42.38 ? C5' SAH 401 A 1 
HETATM 10 C C4' SAH . . . C 2 -6.902 23.247 43.173 1 38.12 ? C4' SAH 401 A 1 
HETATM 11 O O4' SAH . . . C 2 -6.708 22.171 44.064 1 36.78 ? O4' SAH 401 A 1 
HETATM 12 C C3' SAH . . . C 2 -6.829 24.514 44.022 1 44.13 ? C3' SAH 401 A 1 
HETATM 13 O O3' SAH . . . C 2 -8.113 25.091 44.137 1 43.31 ? O3' SAH 401 A 1 
HETATM 14 C C2' SAH . . . C 2 -6.373 24.06 45.391 1 40.16 ? C2' SAH 401 A 1 
HETATM 15 O O2' SAH . . . C 2 -6.979 24.791 46.421 1 42.77 ? O2' SAH 401 A 1 
HETATM 16 C C1' SAH . . . C 2 -6.884 22.647 45.389 1 36.37 ? C1' SAH 401 A 1 
HETATM 17 N N9 SAH . . . C 2 -6.198 21.74 46.306 1 39.67 ? N9 SAH 401 A 1 
HETATM 18 C C8 SAH . . . C 2 -4.844 21.59 46.523 1 35.89 ? C8 SAH 401 A 1 
HETATM 19 N N7 SAH . . . C 2 -4.686 20.602 47.436 1 38.81 ? N7 SAH 401 A 1 
HETATM 20 C C5 SAH . . . C 2 -5.923 20.141 47.795 1 38.09 ? C5 SAH 401 A 1 
HETATM 21 C C6 SAH . . . C 2 -6.347 19.16 48.671 1 38.83 ? C6 SAH 401 A 1 
HETATM 22 N N6 SAH . . . C 2 -5.454 18.462 49.362 1 35.25 ? N6 SAH 401 A 1 
HETATM 23 N N1 SAH . . . C 2 -7.701 18.904 48.815 1 37.49 ? N1 SAH 401 A 1 
HETATM 24 C C2 SAH . . . C 2 -8.639 19.622 48.1 1 36.43 ? C2 SAH 401 A 1 
HETATM 25 N N3 SAH . . . C 2 -8.22 20.604 47.23 1 40.11 ? N3 SAH 401 A 1 
HETATM 26 C C4 SAH . . . C 2 -6.879 20.845 47.085 1 39.26 ? C4 SAH 401 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           26 
#