data_6IVP # _model_server_result.job_id 7iAdTgBMcXYiKNLDh5nDwg _model_server_result.datetime_utc '2024-12-27 18:08:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ivp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":305}' # _entry.id 6IVP # _exptl.entry_id 6IVP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IVP _cell.length_a 114.482 _cell.length_b 162.411 _cell.length_c 161.79 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IVP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 K N N ? 2 L N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 111 A HIS 108 1_555 H ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc2 A ND1 HIS 114 A HIS 111 1_555 H ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc3 A OE1 GLU 194 A GLU 191 1_555 F ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc4 A NE2 HIS 197 A HIS 194 1_555 G ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc5 A ND1 HIS 238 A HIS 235 1_555 W ZN ZN . D ZN 302 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc6 F ZN ZN . A ZN 301 1_555 E NE2 HIS 197 E HIS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc7 G ZN ZN . A ZN 302 1_555 B OE1 GLU 194 B GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc8 B ND1 HIS 111 B HIS 108 1_555 L ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc9 B ND1 HIS 114 B HIS 111 1_555 L ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc10 B NE2 HIS 197 B HIS 194 1_555 O ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc11 B ND1 HIS 238 B HIS 235 1_555 K ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc12 B NE2 HIS 293 B HIS 290 1_555 L ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc13 K ZN ZN . B ZN 301 2_555 C NE2 HIS 293 C HIS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc14 O ZN ZN . B ZN 305 1_555 D OE2 GLU 194 D GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc15 C ND1 HIS 111 C HIS 108 1_555 Q ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc16 C ND1 HIS 114 C HIS 111 1_555 Q ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc17 C OE1 GLU 194 C GLU 191 1_555 P ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc18 C NE2 HIS 197 C HIS 194 1_555 U ZN ZN . C ZN 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc19 P ZN ZN . C ZN 301 1_555 D NE2 HIS 197 D HIS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc20 U ZN ZN . C ZN 306 1_555 E OE1 GLU 194 E GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc21 D ND1 HIS 111 D HIS 108 1_555 V ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc22 D OD2 ASP 112 D ASP 109 1_555 X ZN ZN . D ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc23 D ND1 HIS 114 D HIS 111 1_555 V ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc24 D OD2 ASP 136 D ASP 133 1_555 W ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc25 W ZN ZN . D ZN 302 2_554 E NE2 HIS 54 E HIS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc26 E ND1 HIS 111 E HIS 108 1_555 BA ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc27 E ND1 HIS 114 E HIS 111 1_555 BA ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6IVP _atom_sites.fract_transf_matrix[1][1] 0.008735 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 ZN A 1 301 301 ZN ZN . G 2 ZN A 1 302 302 ZN ZN . H 2 ZN A 1 303 303 ZN ZN . I 3 CL A 1 304 2 CL CL . J 3 CL A 1 305 7 CL CL . K 2 ZN B 1 301 301 ZN ZN . L 2 ZN B 1 302 303 ZN ZN . M 3 CL B 1 303 8 CL CL . N 3 CL B 1 304 9 CL CL . O 2 ZN B 1 305 302 ZN ZN . P 2 ZN C 1 301 301 ZN ZN . Q 2 ZN C 1 302 303 ZN ZN . R 3 CL C 1 303 3 CL CL . S 3 CL C 1 304 10 CL CL . T 2 ZN C 1 305 1 ZN ZN . U 2 ZN C 1 306 302 ZN ZN . V 2 ZN D 1 301 301 ZN ZN . W 2 ZN D 1 302 302 ZN ZN . X 2 ZN D 1 303 303 ZN ZN . Y 3 CL D 1 304 6 CL CL . Z 3 CL D 1 305 11 CL CL . AA 3 CL D 1 306 12 CL CL . BA 2 ZN E 1 301 301 ZN ZN . CA 3 CL E 1 302 5 CL CL . DA 4 HOH C 1 401 1 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 2 _atom_site.Cartn_x 47.105 _atom_site.Cartn_y 2.023 _atom_site.Cartn_z -45.257 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 260.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 305 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #