data_6IVW # _model_server_result.job_id 2sNtaJUNP1UqJguY4oU3GA _model_server_result.datetime_utc '2024-12-27 02:17:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ivw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 6IVW # _exptl.entry_id 6IVW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IVW _cell.length_a 113.966 _cell.length_b 161.77 _cell.length_c 162.371 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IVW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 110 A HIS 108 1_555 H ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc2 A ND1 HIS 113 A HIS 111 1_555 H ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc3 A NZ LYS 190 A LYS 188 1_555 F ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc4 A OE1 GLU 193 A GLU 191 1_555 F ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc5 A OE2 GLU 193 A GLU 191 1_555 F ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc6 A NE2 HIS 196 A HIS 194 1_555 G ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc7 F ZN ZN . A ZN 301 1_555 E NE2 HIS 196 E HIS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc8 G ZN ZN . A ZN 302 1_555 B OE1 GLU 193 B GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc9 G ZN ZN . A ZN 302 1_555 B OE2 GLU 193 B GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc10 B ND1 HIS 110 B HIS 108 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc11 B NE2 HIS 110 B HIS 108 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc12 B NE2 HIS 196 B HIS 194 1_555 K ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc13 C ND1 HIS 110 C HIS 108 1_555 J ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc14 C ND1 HIS 113 C HIS 111 1_555 J ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc15 C NE2 HIS 196 C HIS 194 1_555 M ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc16 D ND1 HIS 110 D HIS 108 1_555 L ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc17 D NE2 HIS 110 D HIS 108 1_555 L ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc18 D ND1 HIS 113 D HIS 111 1_555 L ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc19 D OE1 GLU 193 D GLU 191 1_555 K ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc20 D OE2 GLU 193 D GLU 191 1_555 K ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc21 E ND1 HIS 110 E HIS 108 1_555 N ZN ZN . E ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc22 E NE2 HIS 110 E HIS 108 1_555 N ZN ZN . E ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc23 E ND1 HIS 113 E HIS 111 1_555 N ZN ZN . E ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc24 E NZ LYS 190 E LYS 188 1_555 M ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc25 E OE1 GLU 193 E GLU 191 1_555 M ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6IVW _atom_sites.fract_transf_matrix[1][1] 0.008775 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006182 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006159 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 ZN A 1 301 301 ZN ZN . G 2 ZN A 1 302 302 ZN ZN . H 2 ZN A 1 303 303 ZN ZN . I 2 ZN B 1 301 303 ZN ZN . J 2 ZN C 1 301 303 ZN ZN . K 2 ZN D 1 301 302 ZN ZN . L 2 ZN D 1 302 301 ZN ZN . M 2 ZN E 1 301 301 ZN ZN . N 2 ZN E 1 302 301 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.364 _atom_site.Cartn_y -40.167 _atom_site.Cartn_z 15.511 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 104.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #